RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 CHD4Q14839 1912 aa8.04□□□□□ -1.12
SYCP1-201ENST00000369518 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
SYCP1-201ENST00000369518 MAP3K5Q99683 1374 aa8.04□□□□□ -1.12
SYCP1-201ENST00000369518 RAB3GAP2Q9H2M9 1393 aa8.04□□□□□ -1.12
SYCP1-201ENST00000369518 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
SYCP1-201ENST00000369518 PRAM1Q96QH2 718 aa8.04□□□□□ -1.12
SYCP1-201ENST00000369518 CHMP4BQ9H444 224 aaKnown RBP8.04□□□□□ -1.12
SYCP1-201ENST00000369518 CRB1P82279 1406 aa8.04□□□□□ -1.12
SYCP1-201ENST00000369518 PRR36Q9H6K5 1346 aa8.04□□□□□ -1.12
SYCP1-201ENST00000369518 HMGB2P26583 209 aaKnown RBP8.04□□□□□ -1.12
SYCP1-201ENST00000369518 NFAT5O94916 1531 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 OVOS2A0A0G2JMS6 1433 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 OVOS2A0A0J9YW53 1432 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 OVOS2Q6IE36 1432 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 FAM83GA6ND36 823 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 FKBP8Q14318 412 aa8.03□□□□□ -1.12
SYCP1-201ENST00000369518 VSIG10Q8N0Z9 540 aa8.02□□□□□ -1.12
SYCP1-201ENST00000369518 CNPY4Q8N129 248 aa8.02□□□□□ -1.12
SYCP1-201ENST00000369518 FBXO3Q9UK99 471 aa8.02□□□□□ -1.12
SYCP1-201ENST00000369518 LY75O60449 1722 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 POGKQ9P215 609 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 USP31Q70CQ4 1352 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 LTN1O94822 1766 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 CFAP70Q5T0N1 1121 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 CAMKK2Q96RR4 588 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 USP6P35125 1406 aa8.02□□□□□ -1.13
SYCP1-201ENST00000369518 ITGAEP38570 1179 aa8.01□□□□□ -1.13
SYCP1-201ENST00000369518 TTC21AQ8NDW8 1320 aa8.01□□□□□ -1.13
SYCP1-201ENST00000369518 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
SYCP1-201ENST00000369518 ZNF831Q5JPB2 1677 aa8.01□□□□□ -1.13
SYCP1-201ENST00000369518 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
SYCP1-201ENST00000369518 CCDC7Q96M83 1385 aa8.01□□□□□ -1.13
SYCP1-201ENST00000369518 PLSCR1O15162 318 aa8□□□□□ -1.13
SYCP1-201ENST00000369518 CCDC61Q9Y6R9 512 aa8□□□□□ -1.13
SYCP1-201ENST00000369518 PIAS4Q8N2W9 510 aaPredicted RBP8□□□□□ -1.13
SYCP1-201ENST00000369518 TMEM132EQ6IEE7 984 aa7.99□□□□□ -1.13
SYCP1-201ENST00000369518 NUDT16Q96DE0 195 aaKnown RBP7.99□□□□□ -1.13
SYCP1-201ENST00000369518 STK26Q9P289 416 aa7.99□□□□□ -1.13
SYCP1-201ENST00000369518 CCDC9Q9Y3X0 531 aaKnown RBP7.99□□□□□ -1.13
SYCP1-201ENST00000369518 CPSF1Q10570 1443 aaKnown RBP7.99□□□□□ -1.13
SYCP1-201ENST00000369518 TNS2Q63HR2 1409 aa7.99□□□□□ -1.13
SYCP1-201ENST00000369518 KIAA0232Q92628 1395 aa7.99□□□□□ -1.13
SYCP1-201ENST00000369518 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 PPIP5K1Q6PFW1 1433 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 NBPF8Q3BBV2 869 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 NBPF14Q5TI25 921 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 NLRP13Q86W25 1043 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 SHANK3Q9BYB0 1731 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 TCP11L2Q8N4U5 519 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 NECTIN2Q92692 538 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
SYCP1-201ENST00000369518 MYOM1P52179 1685 aa7.98□□□□□ -1.13
SYCP1-201ENST00000369518 BTAF1O14981 1849 aa7.97□□□□□ -1.13
SYCP1-201ENST00000369518 CWC22Q9HCG8 908 aaKnown RBP7.97□□□□□ -1.13
SYCP1-201ENST00000369518 CICQ96RK0 1608 aaPredicted RBP7.97□□□□□ -1.13
SYCP1-201ENST00000369518 KCNH5Q8NCM2 988 aa7.96□□□□□ -1.13
SYCP1-201ENST00000369518 PRDM11Q9NQV5 511 aa7.96□□□□□ -1.13
SYCP1-201ENST00000369518 RGL3Q3MIN7 710 aa7.96□□□□□ -1.14
SYCP1-201ENST00000369518 NGDNQ8NEJ9 315 aaKnown RBP7.96□□□□□ -1.14
SYCP1-201ENST00000369518 TUBGCP6Q96RT7 1819 aa7.96□□□□□ -1.14
SYCP1-201ENST00000369518 ACEP12821 1306 aa7.95□□□□□ -1.14
SYCP1-201ENST00000369518 CENPJQ9HC77 1338 aaPredicted RBP7.95□□□□□ -1.14
SYCP1-201ENST00000369518 KIF20BQ96Q89 1820 aa7.95□□□□□ -1.14
SYCP1-201ENST00000369518 CDK19Q9BWU1 502 aa7.95□□□□□ -1.14
SYCP1-201ENST00000369518 WDR17Q8IZU2 1322 aa7.94□□□□□ -1.14
SYCP1-201ENST00000369518 PKD1L3Q7Z443 1732 aa7.94□□□□□ -1.14
SYCP1-201ENST00000369518 FAM98CQ17RN3 349 aaKnown RBP7.94□□□□□ -1.14
SYCP1-201ENST00000369518 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
SYCP1-201ENST00000369518 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
SYCP1-201ENST00000369518 KIF24Q5T7B8 1368 aa7.94□□□□□ -1.14
SYCP1-201ENST00000369518 CLSPNQ9HAW4 1339 aa7.94□□□□□ -1.14
SYCP1-201ENST00000369518 XPCQ01831 940 aaPredicted RBP7.94□□□□□ -1.14
SYCP1-201ENST00000369518 NAP1L2Q9ULW6 460 aaPredicted RBP7.94□□□□□ -1.14
SYCP1-201ENST00000369518 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
SYCP1-201ENST00000369518 CARD10Q9BWT7 1032 aa7.93□□□□□ -1.14
SYCP1-201ENST00000369518 ADRA2BP18089 450 aa7.93□□□□□ -1.14
SYCP1-201ENST00000369518 DEFB132Q7Z7B7 95 aa7.93□□□□□ -1.14
SYCP1-201ENST00000369518 EVC2Q86UK5 1308 aa7.93□□□□□ -1.14
SYCP1-201ENST00000369518 TAF1LQ8IZX4 1826 aa7.93□□□□□ -1.14
SYCP1-201ENST00000369518 RTL1A6NKG5 1358 aa7.92□□□□□ -1.14
SYCP1-201ENST00000369518 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
SYCP1-201ENST00000369518 KCNQ2O43526 872 aa7.92□□□□□ -1.14
SYCP1-201ENST00000369518 EDC4Q6P2E9 1401 aaKnown RBP7.92□□□□□ -1.14
SYCP1-201ENST00000369518 TRAK1Q9UPV9 953 aa7.92□□□□□ -1.14
SYCP1-201ENST00000369518 DCAF11Q8TEB1 546 aa7.92□□□□□ -1.14
SYCP1-201ENST00000369518 DCAF8L1A6NGE4 600 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 PMFBP1Q8TBY8 1022 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 SPON1Q9HCB6 807 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 KIF13BQ9NQT8 1826 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 CABLES1Q8TDN4 633 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 DOT1LQ8TEK3 1739 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 GCP02774 474 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 NSD2O96028 1365 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 C5P01031 1676 aa7.91□□□□□ -1.14
SYCP1-201ENST00000369518 CD163L1Q9NR16 1453 aa7.9□□□□□ -1.14
SYCP1-201ENST00000369518 SLC16A10Q8TF71 515 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms