RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 PRIMPOLQ96LW4 560 aa12.67□□□□□ -0.38
RPRD2-202ENST00000369068 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
RPRD2-202ENST00000369068 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
RPRD2-202ENST00000369068 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
RPRD2-202ENST00000369068 PRM3Q9NNZ6 103 aa12.67□□□□□ -0.38
RPRD2-202ENST00000369068 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
RPRD2-202ENST00000369068 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
RPRD2-202ENST00000369068 CT47A1Q5JQC4 288 aaPredicted RBP12.66□□□□□ -0.38
RPRD2-202ENST00000369068 CCT4P50991 539 aaKnown RBP12.66□□□□□ -0.38
RPRD2-202ENST00000369068 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
RPRD2-202ENST00000369068 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
RPRD2-202ENST00000369068 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
RPRD2-202ENST00000369068 SMTNL1A8MU46 457 aa12.65□□□□□ -0.38
RPRD2-202ENST00000369068 SFPQP23246 707 aaKnown RBP eCLIP12.65□□□□□ -0.382e-7■■■□□ 15
RPRD2-202ENST00000369068 EPS15P42566 896 aa12.65□□□□□ -0.38
RPRD2-202ENST00000369068 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.38
RPRD2-202ENST00000369068 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
RPRD2-202ENST00000369068 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
RPRD2-202ENST00000369068 ATP2B1P20020 1258 aa12.65□□□□□ -0.39
RPRD2-202ENST00000369068 SSFA2P28290 1259 aa12.65□□□□□ -0.39
RPRD2-202ENST00000369068 KLHL40Q2TBA0 621 aa12.65□□□□□ -0.39
RPRD2-202ENST00000369068 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.39
RPRD2-202ENST00000369068 C20orf194Q5TEA3 1177 aa12.65□□□□□ -0.39
RPRD2-202ENST00000369068 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.39
RPRD2-202ENST00000369068 LUC7LQ9NQ29 371 aaKnown RBP12.65□□□□□ -0.39
RPRD2-202ENST00000369068 ERLIN2O94905 339 aa12.64□□□□□ -0.39
RPRD2-202ENST00000369068 IQCEQ6IPM2 695 aa12.64□□□□□ -0.39
RPRD2-202ENST00000369068 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
RPRD2-202ENST00000369068 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
RPRD2-202ENST00000369068 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPRD2-202ENST00000369068 TNNT1P13805 278 aa12.64□□□□□ -0.39
RPRD2-202ENST00000369068 TXLNAP40222 546 aa12.64□□□□□ -0.39
RPRD2-202ENST00000369068 USP25Q9UHP3 1055 aa12.64□□□□□ -0.39
RPRD2-202ENST00000369068 CCDC181Q5TID7 509 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 PDRG1Q9NUG6 133 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 TXLNBQ8N3L3 684 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 G3V3G9 751 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 NEMFO60524 1076 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 PLCD4Q9BRC7 762 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
RPRD2-202ENST00000369068 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 STK3Q13188 491 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
RPRD2-202ENST00000369068 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 CRACR2AQ9BSW2 395 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 PLEKHH2Q8IVE3 1493 aa12.62□□□□□ -0.39
RPRD2-202ENST00000369068 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 CFAP70Q5T0N1 1121 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
RPRD2-202ENST00000369068 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 ODF2Q5BJF6 829 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 GIMAP7Q8NHV1 300 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 BAG4O95429 457 aaKnown RBP12.61□□□□□ -0.39
RPRD2-202ENST00000369068 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 CFAP100Q494V2 611 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 FAM107BQ9H098 131 aa12.61□□□□□ -0.39
RPRD2-202ENST00000369068 KRT32Q14532 448 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 DNAJC2Q99543 621 aaKnown RBP12.6□□□□□ -0.39
RPRD2-202ENST00000369068 SHTN1A0MZ66 631 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 URI1O94763 535 aaPredicted RBP12.6□□□□□ -0.39
RPRD2-202ENST00000369068 C16orf45Q96MC5 204 aaPredicted RBP12.6□□□□□ -0.39
RPRD2-202ENST00000369068 ANO10Q9NW15 660 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 PLEKHH1Q9ULM0 1364 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
RPRD2-202ENST00000369068 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
RPRD2-202ENST00000369068 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
RPRD2-202ENST00000369068 STIM1Q13586 685 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 VPS37DQ86XT2 251 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 TIGD1Q96MW7 591 aa12.6□□□□□ -0.39
RPRD2-202ENST00000369068 FAM193AP78312 1265 aa12.59□□□□□ -0.39
RPRD2-202ENST00000369068 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
RPRD2-202ENST00000369068 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
RPRD2-202ENST00000369068 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
RPRD2-202ENST00000369068 GTF2F1P35269 517 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPRD2-202ENST00000369068 MAP9Q49MG5 647 aa12.59□□□□□ -0.39
RPRD2-202ENST00000369068 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
RPRD2-202ENST00000369068 TCEAL9Q9UHQ7 104 aa12.59□□□□□ -0.39
RPRD2-202ENST00000369068 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
RPRD2-202ENST00000369068 ZRSR2Q15696 482 aaKnown RBP12.58□□□□□ -0.39
RPRD2-202ENST00000369068 CAMK4Q16566 473 aa12.58□□□□□ -0.39
RPRD2-202ENST00000369068 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.39
RPRD2-202ENST00000369068 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.39
RPRD2-202ENST00000369068 ADCY5O95622 1261 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 ERBINQ96RT1 1412 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 POLR3GO15318 223 aaPredicted RBP12.58□□□□□ -0.4
RPRD2-202ENST00000369068 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 TRERF1Q96PN7 1200 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 FERMT3Q86UX7 667 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
RPRD2-202ENST00000369068 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms