RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 METP08581 1390 aa21.74■■□□□ 1.07
CHTOP-203ENST00000368690 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
CHTOP-203ENST00000368690 BMP2KLQ5H9B9 411 aa21.73■■□□□ 1.07
CHTOP-203ENST00000368690 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
CHTOP-203ENST00000368690 TERF1P54274 439 aa21.72■■□□□ 1.07
CHTOP-203ENST00000368690 ITPRIPQ8IWB1 547 aa21.72■■□□□ 1.07
CHTOP-203ENST00000368690 SLC26A8Q96RN1 970 aa21.72■■□□□ 1.07
CHTOP-203ENST00000368690 MINK1Q8N4C8 1332 aaPredicted RBP21.72■■□□□ 1.07
CHTOP-203ENST00000368690 SLIT1O75093 1534 aa21.72■■□□□ 1.07
CHTOP-203ENST00000368690 PLEKHG1Q9ULL1 1385 aa21.72■■□□□ 1.07
CHTOP-203ENST00000368690 SLC12A5Q9H2X9 1139 aa21.71■■□□□ 1.07
CHTOP-203ENST00000368690 IPO8O15397 1037 aaKnown RBP21.71■■□□□ 1.07
CHTOP-203ENST00000368690 SSH1Q8WYL5 1049 aa21.71■■□□□ 1.07
CHTOP-203ENST00000368690 PDCL3Q9H2J4 239 aa21.71■■□□□ 1.07
CHTOP-203ENST00000368690 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
CHTOP-203ENST00000368690 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
CHTOP-203ENST00000368690 EXOSC9Q06265 439 aaKnown RBP21.7■■□□□ 1.06
CHTOP-203ENST00000368690 KIF2CQ99661 725 aa21.7■■□□□ 1.06
CHTOP-203ENST00000368690 ARHGAP23Q9P227 1491 aa21.69■■□□□ 1.06
CHTOP-203ENST00000368690 GOLGA6L22H0YM25 854 aa21.69■■□□□ 1.06
CHTOP-203ENST00000368690 U2AF1L5P0DN76 240 aaPredicted RBP21.69■■□□□ 1.06
CHTOP-203ENST00000368690 U2AF1Q01081 240 aaKnown RBP eCLIP21.69■■□□□ 1.067e-8■■■■■ 27.9
CHTOP-203ENST00000368690 WAPLQ7Z5K2 1190 aa21.69■■□□□ 1.06
CHTOP-203ENST00000368690 ANKRD36BQ8N2N9 1353 aa21.69■■□□□ 1.06
CHTOP-203ENST00000368690 ZSCAN30Q86W11 494 aa21.68■■□□□ 1.06
CHTOP-203ENST00000368690 CHD1LQ86WJ1 897 aa21.68■■□□□ 1.06
CHTOP-203ENST00000368690 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
CHTOP-203ENST00000368690 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
CHTOP-203ENST00000368690 ADAMTS13Q76LX8 1427 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
CHTOP-203ENST00000368690 PLEKHF1Q96S99 279 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 KLHL40Q2TBA0 621 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 HS1BP3Q53T59 392 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 TMEM57Q8N5G2 664 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
CHTOP-203ENST00000368690 NOB1Q9ULX3 412 aaKnown RBP21.67■■□□□ 1.06
CHTOP-203ENST00000368690 MED14O60244 1454 aa21.66■■□□□ 1.06
CHTOP-203ENST00000368690 ANP32BQ92688 251 aaKnown RBP21.66■■□□□ 1.06
CHTOP-203ENST00000368690 TSR2Q969E8 191 aaKnown RBP21.66■■□□□ 1.06
CHTOP-203ENST00000368690 OFD1O75665 1012 aa21.65■■□□□ 1.06
CHTOP-203ENST00000368690 TMPOP42166 694 aaKnown RBP21.65■■□□□ 1.06
CHTOP-203ENST00000368690 BRPF1P55201 1214 aaPredicted RBP21.65■■□□□ 1.06
CHTOP-203ENST00000368690 CHMP4BQ9H444 224 aaKnown RBP21.65■■□□□ 1.06
CHTOP-203ENST00000368690 NASPP49321 788 aaPredicted RBP21.65■■□□□ 1.06
CHTOP-203ENST00000368690 TULP4Q9NRJ4 1543 aa21.64■■□□□ 1.06
CHTOP-203ENST00000368690 ZNF428Q96B54 188 aa21.64■■□□□ 1.06
CHTOP-203ENST00000368690 GCC1Q96CN9 775 aa21.64■■□□□ 1.06
CHTOP-203ENST00000368690 TRIM35Q9UPQ4 493 aa21.64■■□□□ 1.06
CHTOP-203ENST00000368690 ZNF142P52746 1687 aaPredicted RBP21.64■■□□□ 1.05
CHTOP-203ENST00000368690 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.64■■□□□ 1.05
CHTOP-203ENST00000368690 COL3A1P02461 1466 aaPredicted RBP21.63■■□□□ 1.05
CHTOP-203ENST00000368690 ANKLE2Q86XL3 938 aa21.63■■□□□ 1.05
CHTOP-203ENST00000368690 ZNF445P59923 1031 aa21.62■■□□□ 1.05
CHTOP-203ENST00000368690 KIAA1211Q6ZU35 1233 aa21.62■■□□□ 1.05
CHTOP-203ENST00000368690 DLC1Q96QB1 1528 aa21.62■■□□□ 1.05
CHTOP-203ENST00000368690 LNPKQ9C0E8 428 aa21.61■■□□□ 1.05
CHTOP-203ENST00000368690 CFAP44Q96MT7 982 aa21.61■■□□□ 1.05
CHTOP-203ENST00000368690 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
CHTOP-203ENST00000368690 CDK19Q9BWU1 502 aa21.58■■□□□ 1.05
CHTOP-203ENST00000368690 ANKRD26Q9UPS8 1709 aa21.58■■□□□ 1.05
CHTOP-203ENST00000368690 BAG4O95429 457 aaKnown RBP21.58■■□□□ 1.04
CHTOP-203ENST00000368690 MAP7D2Q96T17 732 aa21.58■■□□□ 1.04
CHTOP-203ENST00000368690 TBX22Q9Y458 520 aa21.58■■□□□ 1.04
CHTOP-203ENST00000368690 PPIP5K1Q6PFW1 1433 aa21.58■■□□□ 1.04
CHTOP-203ENST00000368690 CD2BP2O95400 341 aaKnown RBP21.57■■□□□ 1.04
CHTOP-203ENST00000368690 MSNP26038 577 aaKnown RBP21.57■■□□□ 1.04
CHTOP-203ENST00000368690 SSFA2P28290 1259 aa21.57■■□□□ 1.04
CHTOP-203ENST00000368690 TBC1D9Q6ZT07 1266 aa21.57■■□□□ 1.04
CHTOP-203ENST00000368690 AMOTL2Q9Y2J4 779 aa21.57■■□□□ 1.04
CHTOP-203ENST00000368690 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
CHTOP-203ENST00000368690 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
CHTOP-203ENST00000368690 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
CHTOP-203ENST00000368690 NUCB2P80303 420 aa21.55■■□□□ 1.04
CHTOP-203ENST00000368690 GAS2L2Q8NHY3 880 aa21.55■■□□□ 1.04
CHTOP-203ENST00000368690 ARHGAP45Q92619 1136 aa21.55■■□□□ 1.04
CHTOP-203ENST00000368690 TECPR2O15040 1411 aa21.55■■□□□ 1.04
CHTOP-203ENST00000368690 CPS1P31327 1500 aa21.55■■□□□ 1.04
CHTOP-203ENST00000368690 PTPRUQ92729 1446 aa21.54■■□□□ 1.04
CHTOP-203ENST00000368690 ZNF500O60304 480 aaPredicted RBP21.54■■□□□ 1.04
CHTOP-203ENST00000368690 FAM135BQ49AJ0 1406 aa21.54■■□□□ 1.04
CHTOP-203ENST00000368690 CDC45O75419 566 aa21.53■■□□□ 1.04
CHTOP-203ENST00000368690 RABEP1Q15276 862 aa21.53■■□□□ 1.04
CHTOP-203ENST00000368690 PDLIM2Q96JY6 352 aa21.53■■□□□ 1.04
CHTOP-203ENST00000368690 PTCH1Q13635 1447 aa21.53■■□□□ 1.04
CHTOP-203ENST00000368690 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
CHTOP-203ENST00000368690 ZBTB7BO15156 539 aaPredicted RBP21.53■■□□□ 1.04
CHTOP-203ENST00000368690 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
CHTOP-203ENST00000368690 NOL7Q9UMY1 257 aaKnown RBP21.53■■□□□ 1.04
CHTOP-203ENST00000368690 CDC42BPGQ6DT37 1551 aa21.52■■□□□ 1.04
CHTOP-203ENST00000368690 CYP2E1P05181 493 aaPredicted RBP21.52■■□□□ 1.04
CHTOP-203ENST00000368690 ANKRD45Q5TZF3 282 aa21.52■■□□□ 1.04
CHTOP-203ENST00000368690 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
CHTOP-203ENST00000368690 MCM5P33992 734 aa21.51■■□□□ 1.03
CHTOP-203ENST00000368690 RIPK4P57078 832 aa21.51■■□□□ 1.03
CHTOP-203ENST00000368690 SIRT1Q96EB6 747 aa21.51■■□□□ 1.03
CHTOP-203ENST00000368690 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-203ENST00000368690 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
CHTOP-203ENST00000368690 KDM4FA0A1W2PPD8 638 aa21.5■■□□□ 1.03
CHTOP-203ENST00000368690 U2SURPO15042 1029 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms