RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CEP152O94986 1710 aa12.34□□□□□ -0.43
TPM3-213ENST00000368545 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
TPM3-213ENST00000368545 TRPM2O94759 1503 aa12.34□□□□□ -0.43
TPM3-213ENST00000368545 ADGRB3O60242 1522 aa12.33□□□□□ -0.44
TPM3-213ENST00000368545 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
TPM3-213ENST00000368545 TBX22Q9Y458 520 aa12.33□□□□□ -0.44
TPM3-213ENST00000368545 YY1P25490 414 aa12.32□□□□□ -0.44
TPM3-213ENST00000368545 L3MBTL2Q969R5 705 aa12.32□□□□□ -0.44
TPM3-213ENST00000368545 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
TPM3-213ENST00000368545 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.32□□□□□ -0.44
TPM3-213ENST00000368545 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
TPM3-213ENST00000368545 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
TPM3-213ENST00000368545 LAMC1P11047 1609 aa12.31□□□□□ -0.44
TPM3-213ENST00000368545 PNPLA6Q8IY17 1366 aa12.31□□□□□ -0.44
TPM3-213ENST00000368545 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
TPM3-213ENST00000368545 DDX12PQ92771 950 aa12.3□□□□□ -0.44
TPM3-213ENST00000368545 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
TPM3-213ENST00000368545 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
TPM3-213ENST00000368545 MS4A3Q96HJ5 214 aa12.29□□□□□ -0.44
TPM3-213ENST00000368545 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
TPM3-213ENST00000368545 SH3D19Q5HYK7 790 aa12.29□□□□□ -0.44
TPM3-213ENST00000368545 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
TPM3-213ENST00000368545 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
TPM3-213ENST00000368545 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
TPM3-213ENST00000368545 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
TPM3-213ENST00000368545 PTGDRQ13258 359 aa12.28□□□□□ -0.44
TPM3-213ENST00000368545 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
TPM3-213ENST00000368545 USP21Q9UK80 565 aa12.28□□□□□ -0.44
TPM3-213ENST00000368545 BRINP3Q76B58 766 aa12.27□□□□□ -0.45
TPM3-213ENST00000368545 CLTCL1P53675 1640 aa12.27□□□□□ -0.45
TPM3-213ENST00000368545 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
TPM3-213ENST00000368545 TRAIPQ9BWF2 469 aa12.26□□□□□ -0.45
TPM3-213ENST00000368545 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
TPM3-213ENST00000368545 KCTD17Q8N5Z5 321 aa12.26□□□□□ -0.45
TPM3-213ENST00000368545 KIF1BO60333 1816 aa12.25□□□□□ -0.45
TPM3-213ENST00000368545 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
TPM3-213ENST00000368545 PTGER2P43116 358 aa12.25□□□□□ -0.45
TPM3-213ENST00000368545 BAG6P46379 1132 aa12.25□□□□□ -0.45
TPM3-213ENST00000368545 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
TPM3-213ENST00000368545 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
TPM3-213ENST00000368545 KIF3CO14782 793 aa12.23□□□□□ -0.45
TPM3-213ENST00000368545 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
TPM3-213ENST00000368545 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
TPM3-213ENST00000368545 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
TPM3-213ENST00000368545 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
TPM3-213ENST00000368545 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
TPM3-213ENST00000368545 NBPF8Q3BBV2 869 aa12.22□□□□□ -0.45
TPM3-213ENST00000368545 NOS1P29475 1434 aa12.21□□□□□ -0.45
TPM3-213ENST00000368545 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
TPM3-213ENST00000368545 TRPM1Q7Z4N2 1603 aa12.21□□□□□ -0.45
TPM3-213ENST00000368545 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
TPM3-213ENST00000368545 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
TPM3-213ENST00000368545 ZFYVE9O95405 1425 aa12.21□□□□□ -0.46
TPM3-213ENST00000368545 MST1RQ04912 1400 aa12.21□□□□□ -0.46
TPM3-213ENST00000368545 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM3-213ENST00000368545 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 TIE1P35590 1138 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 PARD3Q8TEW0 1356 aa12.2□□□□□ -0.46
TPM3-213ENST00000368545 RAD21O60216 631 aa12.19□□□□□ -0.46
TPM3-213ENST00000368545 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
TPM3-213ENST00000368545 IFT172Q9UG01 1749 aa12.19□□□□□ -0.46
TPM3-213ENST00000368545 MARF1Q9Y4F3 1742 aaKnown RBP12.19□□□□□ -0.46
TPM3-213ENST00000368545 DISP2A7MBM2 1401 aa12.19□□□□□ -0.46
TPM3-213ENST00000368545 GJD4Q96KN9 370 aaPredicted RBP12.19□□□□□ -0.46
TPM3-213ENST00000368545 RIMS2Q9UQ26 1411 aa12.18□□□□□ -0.46
TPM3-213ENST00000368545 CLCN1P35523 988 aa12.17□□□□□ -0.46
TPM3-213ENST00000368545 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
TPM3-213ENST00000368545 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
TPM3-213ENST00000368545 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
TPM3-213ENST00000368545 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
TPM3-213ENST00000368545 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
TPM3-213ENST00000368545 IDI1Q13907 227 aa12.16□□□□□ -0.46
TPM3-213ENST00000368545 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
TPM3-213ENST00000368545 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
TPM3-213ENST00000368545 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
TPM3-213ENST00000368545 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
TPM3-213ENST00000368545 MYOM2P54296 1465 aa12.16□□□□□ -0.46
TPM3-213ENST00000368545 HSPA5P11021 654 aaKnown RBP12.16□□□□□ -0.46
TPM3-213ENST00000368545 SSTR3P32745 418 aaPredicted RBP12.16□□□□□ -0.46
TPM3-213ENST00000368545 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
TPM3-213ENST00000368545 SOS2Q07890 1332 aaPredicted RBP12.15□□□□□ -0.46
TPM3-213ENST00000368545 TMEM121BQ9BXQ6 578 aaPredicted RBP12.15□□□□□ -0.46
TPM3-213ENST00000368545 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
TPM3-213ENST00000368545 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
TPM3-213ENST00000368545 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
TPM3-213ENST00000368545 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
TPM3-213ENST00000368545 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
TPM3-213ENST00000368545 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
TPM3-213ENST00000368545 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
TPM3-213ENST00000368545 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
TPM3-213ENST00000368545 ADGRL3Q9HAR2 1447 aa12.14□□□□□ -0.47
TPM3-213ENST00000368545 PPLO60437 1756 aa12.14□□□□□ -0.47
TPM3-213ENST00000368545 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
TPM3-213ENST00000368545 USP47Q96K76 1375 aa12.13□□□□□ -0.47
TPM3-213ENST00000368545 XRN1Q8IZH2 1706 aaKnown RBP12.13□□□□□ -0.47
TPM3-213ENST00000368545 CDHR5Q9HBB8 845 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 892.4 ms