RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ONECUT3O60422 494 aaPredicted RBP31.07■■■□□ 2.56
ECHDC1-203ENST00000368291 COG3Q96JB2 828 aa31.07■■■□□ 2.56
ECHDC1-203ENST00000368291 ABCC6O95255 1503 aa31.06■■■□□ 2.56
ECHDC1-203ENST00000368291 GGNBP2Q9H3C7 697 aa31.06■■■□□ 2.56
ECHDC1-203ENST00000368291 SPATA31A1Q5TZJ5 1347 aa31.06■■■□□ 2.56
ECHDC1-203ENST00000368291 EVA1CP58658 441 aa31.05■■■□□ 2.56
ECHDC1-203ENST00000368291 LARP1Q6PKG0 1096 aaKnown RBP31.05■■■□□ 2.56
ECHDC1-203ENST00000368291 THSD7AQ9UPZ6 1657 aa31.03■■■□□ 2.56
ECHDC1-203ENST00000368291 PANK3Q9H999 370 aa31.03■■■□□ 2.56
ECHDC1-203ENST00000368291 FBLN1P23142 703 aa31.02■■■□□ 2.56
ECHDC1-203ENST00000368291 FAM98CQ17RN3 349 aaKnown RBP31.02■■■□□ 2.56
ECHDC1-203ENST00000368291 SEPT12Q8IYM1 358 aa31.01■■■□□ 2.55
ECHDC1-203ENST00000368291 ANKRD26Q9UPS8 1709 aa31.01■■■□□ 2.55
ECHDC1-203ENST00000368291 CRB1P82279 1406 aa30.99■■■□□ 2.55
ECHDC1-203ENST00000368291 CCDC7Q96M83 1385 aa30.96■■■□□ 2.55
ECHDC1-203ENST00000368291 CGNL1Q0VF96 1302 aa30.96■■■□□ 2.55
ECHDC1-203ENST00000368291 WDR17Q8IZU2 1322 aa30.96■■■□□ 2.55
ECHDC1-203ENST00000368291 USP35Q9P2H5 1018 aa30.96■■■□□ 2.55
ECHDC1-203ENST00000368291 MAP3K19Q56UN5 1328 aa30.95■■■□□ 2.55
ECHDC1-203ENST00000368291 WASHC2AQ641Q2 1341 aa30.95■■■□□ 2.55
ECHDC1-203ENST00000368291 WNK3Q9BYP7 1800 aa30.94■■■□□ 2.54
ECHDC1-203ENST00000368291 BARGINQ6ZT62 677 aa30.93■■■□□ 2.54
ECHDC1-203ENST00000368291 MAP2P11137 1827 aaKnown RBP30.93■■■□□ 2.54
ECHDC1-203ENST00000368291 TCP11L2Q8N4U5 519 aa30.92■■■□□ 2.54
ECHDC1-203ENST00000368291 IP6K1Q92551 441 aa30.92■■■□□ 2.54
ECHDC1-203ENST00000368291 UPF1Q92900 1129 aaKnown RBP eCLIP30.92■■■□□ 2.541e-6■□□□□ 8
ECHDC1-203ENST00000368291 ERBB3P21860 1342 aa30.91■■■□□ 2.54
ECHDC1-203ENST00000368291 RRS1Q15050 365 aaKnown RBP30.91■■■□□ 2.54
ECHDC1-203ENST00000368291 TOM1L2Q6ZVM7 507 aa30.91■■■□□ 2.54
ECHDC1-203ENST00000368291 THRAP3Q9Y2W1 955 aaKnown RBP30.91■■■□□ 2.54
ECHDC1-203ENST00000368291 PEAK1Q9H792 1746 aa30.9■■■□□ 2.54
ECHDC1-203ENST00000368291 EP400Q96L91 3159 aa30.9■■■□□ 2.54
ECHDC1-203ENST00000368291 A0A0G2JS52 829 aa30.9■■■□□ 2.54
ECHDC1-203ENST00000368291 BLMP54132 1417 aaPredicted RBP30.9■■■□□ 2.54
ECHDC1-203ENST00000368291 MYT1Q01538 1121 aa30.9■■■□□ 2.54
ECHDC1-203ENST00000368291 PARP4Q9UKK3 1724 aaKnown RBP30.89■■■□□ 2.54
ECHDC1-203ENST00000368291 RGPD2P0DJD1 1756 aa30.87■■■□□ 2.53
ECHDC1-203ENST00000368291 HOXC9P31274 260 aa30.87■■■□□ 2.53
ECHDC1-203ENST00000368291 KRT27Q7Z3Y8 459 aa30.87■■■□□ 2.53
ECHDC1-203ENST00000368291 CSB-PGBD3P0DP91 1061 aa30.86■■■□□ 2.53
ECHDC1-203ENST00000368291 ANKRD24Q8TF21 1146 aa30.86■■■□□ 2.53
ECHDC1-203ENST00000368291 FAM208AQ9UK61 1670 aaKnown RBP30.85■■■□□ 2.53
ECHDC1-203ENST00000368291 CARD10Q9BWT7 1032 aa30.85■■■□□ 2.53
ECHDC1-203ENST00000368291 RTL1A6NKG5 1358 aa30.84■■■□□ 2.53
ECHDC1-203ENST00000368291 AMPHP49418 695 aa30.84■■■□□ 2.53
ECHDC1-203ENST00000368291 NSD2O96028 1365 aa30.83■■■□□ 2.53
ECHDC1-203ENST00000368291 PER1O15534 1290 aaPredicted RBP30.82■■■□□ 2.52
ECHDC1-203ENST00000368291 KNSTRNQ9Y448 316 aa30.81■■■□□ 2.52
ECHDC1-203ENST00000368291 LRRC37A3O60309 1634 aa30.81■■■□□ 2.52
ECHDC1-203ENST00000368291 EMILIN1Q9Y6C2 1016 aa30.8■■■□□ 2.52
ECHDC1-203ENST00000368291 DISP2A7MBM2 1401 aa30.8■■■□□ 2.52
ECHDC1-203ENST00000368291 AMER1Q5JTC6 1135 aaPredicted RBP30.79■■■□□ 2.52
ECHDC1-203ENST00000368291 KIF24Q5T7B8 1368 aa30.79■■■□□ 2.52
ECHDC1-203ENST00000368291 LTV1Q96GA3 475 aaPredicted RBP30.78■■■□□ 2.52
ECHDC1-203ENST00000368291 NLRP2Q9NX02 1062 aa30.78■■■□□ 2.52
ECHDC1-203ENST00000368291 FAM182BQ5T319 152 aa30.77■■■□□ 2.52
ECHDC1-203ENST00000368291 FLT4P35916 1363 aa30.76■■■□□ 2.52
ECHDC1-203ENST00000368291 HSP90AB2PQ58FF8 381 aa30.76■■■□□ 2.51
ECHDC1-203ENST00000368291 POLKQ9UBT6 870 aa30.75■■■□□ 2.51
ECHDC1-203ENST00000368291 INSRP06213 1382 aa30.75■■■□□ 2.51
ECHDC1-203ENST00000368291 TNNT2P45379 298 aaPredicted RBP30.74■■■□□ 2.51
ECHDC1-203ENST00000368291 CDCA7Q9BWT1 371 aaPredicted RBP30.71■■■□□ 2.51
ECHDC1-203ENST00000368291 MORC1Q86VD1 984 aa30.7■■■□□ 2.51
ECHDC1-203ENST00000368291 ZEB1P37275 1124 aaPredicted RBP30.69■■■□□ 2.5
ECHDC1-203ENST00000368291 PDE3BQ13370 1112 aa30.69■■■□□ 2.5
ECHDC1-203ENST00000368291 PPM1GO15355 546 aaPredicted RBP30.68■■■□□ 2.5
ECHDC1-203ENST00000368291 SMG6Q86US8 1419 aaKnown RBP30.68■■■□□ 2.5
ECHDC1-203ENST00000368291 DDB1Q16531 1140 aa30.67■■■□□ 2.5
ECHDC1-203ENST00000368291 NBPF6Q5VWK0 638 aa30.66■■■□□ 2.5
ECHDC1-203ENST00000368291 NBPF4Q96M43 638 aa30.66■■■□□ 2.5
ECHDC1-203ENST00000368291 SBF2Q86WG5 1849 aa30.66■■■□□ 2.5
ECHDC1-203ENST00000368291 RGPD1P0DJD0 1748 aa30.66■■■□□ 2.5
ECHDC1-203ENST00000368291 IL2RBP14784 551 aa30.66■■■□□ 2.5
ECHDC1-203ENST00000368291 CCDC125Q86Z20 511 aa30.66■■■□□ 2.5
ECHDC1-203ENST00000368291 NPC1L1Q9UHC9 1359 aa30.65■■■□□ 2.5
ECHDC1-203ENST00000368291 TNS1Q9HBL0 1735 aaKnown RBP30.64■■■□□ 2.5
ECHDC1-203ENST00000368291 TNS2Q63HR2 1409 aa30.64■■■□□ 2.5
ECHDC1-203ENST00000368291 CC2D1BQ5T0F9 858 aaKnown RBP30.63■■■□□ 2.49
ECHDC1-203ENST00000368291 FAM196AQ6ZSG2 479 aa30.63■■■□□ 2.49
ECHDC1-203ENST00000368291 EXOC5O00471 708 aa30.61■■■□□ 2.49
ECHDC1-203ENST00000368291 MARCH10Q8NA82 808 aaPredicted RBP30.61■■■□□ 2.49
ECHDC1-203ENST00000368291 SHANK3Q9BYB0 1731 aa30.6■■■□□ 2.49
ECHDC1-203ENST00000368291 USHBP1Q8N6Y0 703 aa30.6■■■□□ 2.49
ECHDC1-203ENST00000368291 MEGF6O75095 1541 aa30.59■■■□□ 2.49
ECHDC1-203ENST00000368291 OVOS2A0A0G2JMS6 1433 aa30.59■■■□□ 2.49
ECHDC1-203ENST00000368291 NCAPD2Q15021 1401 aa30.58■■■□□ 2.49
ECHDC1-203ENST00000368291 EIF4A2Q14240 407 aaKnown RBP30.55■■■□□ 2.48
ECHDC1-203ENST00000368291 TRIM37O94972 964 aa30.54■■■□□ 2.48
ECHDC1-203ENST00000368291 BCL9O00512 1426 aa30.54■■■□□ 2.48
ECHDC1-203ENST00000368291 EYA1Q99502 592 aa30.54■■■□□ 2.48
ECHDC1-203ENST00000368291 CNGB1Q14028 1251 aaPredicted RBP30.53■■■□□ 2.48
ECHDC1-203ENST00000368291 DEFB132Q7Z7B7 95 aa30.53■■■□□ 2.48
ECHDC1-203ENST00000368291 SF3B2Q13435 895 aaKnown RBP30.51■■■□□ 2.47
ECHDC1-203ENST00000368291 MTHFSP49914 203 aa30.49■■■□□ 2.47
ECHDC1-203ENST00000368291 KAT6BQ8WYB5 2073 aa30.48■■■□□ 2.47
ECHDC1-203ENST00000368291 PKD1L3Q7Z443 1732 aa30.48■■■□□ 2.47
ECHDC1-203ENST00000368291 RAPGEF4Q8WZA2 1011 aa30.47■■■□□ 2.47
ECHDC1-203ENST00000368291 IGSF1Q8N6C5 1336 aa30.45■■■□□ 2.47
ECHDC1-203ENST00000368291 PTF1AQ7RTS3 328 aa30.45■■■□□ 2.47
ECHDC1-203ENST00000368291 ZCRB1Q8TBF4 217 aaKnown RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms