RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 TTC39AQ5SRH9 613 aa19.84■□□□□ 0.77
SCAF8-201ENST00000367178 XBP1P17861 261 aa19.83■□□□□ 0.77
SCAF8-201ENST00000367178 WASLO00401 505 aaPredicted RBP19.83■□□□□ 0.77
SCAF8-201ENST00000367178 PCMTD1Q96MG8 357 aaPredicted RBP19.83■□□□□ 0.76
SCAF8-201ENST00000367178 MCM10Q7L590 875 aa19.82■□□□□ 0.76
SCAF8-201ENST00000367178 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
SCAF8-201ENST00000367178 BRMS1Q9HCU9 246 aa19.82■□□□□ 0.76
SCAF8-201ENST00000367178 MTMR7Q9Y216 660 aa19.82■□□□□ 0.76
SCAF8-201ENST00000367178 IPO7O95373 1038 aaKnown RBP19.82■□□□□ 0.76
SCAF8-201ENST00000367178 CCDC57Q2TAC2 916 aa19.82■□□□□ 0.76
SCAF8-201ENST00000367178 GNL3LQ9NVN8 582 aaKnown RBP19.82■□□□□ 0.76
SCAF8-201ENST00000367178 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
SCAF8-201ENST00000367178 DHX29Q7Z478 1369 aaKnown RBP19.82■□□□□ 0.76
SCAF8-201ENST00000367178 RPAP2Q8IXW5 612 aaPredicted RBP19.81■□□□□ 0.76
SCAF8-201ENST00000367178 PDCP20941 246 aa19.81■□□□□ 0.76
SCAF8-201ENST00000367178 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
SCAF8-201ENST00000367178 MIS18AQ9NYP9 233 aa19.81■□□□□ 0.76
SCAF8-201ENST00000367178 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
SCAF8-201ENST00000367178 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
SCAF8-201ENST00000367178 GOLGA6L1Q8N7Z2 621 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 DUSP27Q5VZP5 1158 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 TMEM57Q8N5G2 664 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.761e-6■■■■□ 21.2
SCAF8-201ENST00000367178 EMILIN1Q9Y6C2 1016 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 NOS1P29475 1434 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 FAM135AQ9P2D6 1515 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 PPP6R1Q9UPN7 881 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 MPHOSPH8Q99549 860 aa19.8■□□□□ 0.76
SCAF8-201ENST00000367178 FOXO3O43524 673 aa19.79■□□□□ 0.76
SCAF8-201ENST00000367178 DCTN1Q14203 1278 aa19.79■□□□□ 0.76
SCAF8-201ENST00000367178 CCAR2Q8N163 923 aaKnown RBP19.79■□□□□ 0.76
SCAF8-201ENST00000367178 RRP12Q5JTH9 1297 aaKnown RBP19.79■□□□□ 0.76
SCAF8-201ENST00000367178 SDF4Q9BRK5 362 aa19.79■□□□□ 0.76
SCAF8-201ENST00000367178 A0A0U1RQG5 324 aaPredicted RBP19.79■□□□□ 0.76
SCAF8-201ENST00000367178 CCDC43Q96MW1 224 aaKnown RBP19.79■□□□□ 0.76
SCAF8-201ENST00000367178 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
SCAF8-201ENST00000367178 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
SCAF8-201ENST00000367178 AACSQ86V21 672 aa19.78■□□□□ 0.76
SCAF8-201ENST00000367178 BACH2Q9BYV9 841 aa19.78■□□□□ 0.76
SCAF8-201ENST00000367178 GPATCH8Q9UKJ3 1502 aaKnown RBP19.78■□□□□ 0.76
SCAF8-201ENST00000367178 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
SCAF8-201ENST00000367178 CEP126Q9P2H0 1117 aa19.78■□□□□ 0.76
SCAF8-201ENST00000367178 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
SCAF8-201ENST00000367178 SCAF11Q99590 1463 aaKnown RBP19.78■□□□□ 0.76
SCAF8-201ENST00000367178 SLC3A2P08195 630 aaKnown RBP19.77■□□□□ 0.76
SCAF8-201ENST00000367178 IFT57Q9NWB7 429 aa19.77■□□□□ 0.76
SCAF8-201ENST00000367178 KDM4AO75164 1064 aa19.77■□□□□ 0.75
SCAF8-201ENST00000367178 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.75
SCAF8-201ENST00000367178 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
SCAF8-201ENST00000367178 MAP4K4O95819 1239 aaPredicted RBP19.76■□□□□ 0.75
SCAF8-201ENST00000367178 SSH1Q8WYL5 1049 aa19.76■□□□□ 0.75
SCAF8-201ENST00000367178 IKQ13123 557 aaPredicted RBP19.75■□□□□ 0.75
SCAF8-201ENST00000367178 ATP2B1P20020 1258 aa19.75■□□□□ 0.75
SCAF8-201ENST00000367178 ZNF592Q92610 1267 aa19.75■□□□□ 0.75
SCAF8-201ENST00000367178 USHBP1Q8N6Y0 703 aa19.75■□□□□ 0.75
SCAF8-201ENST00000367178 TAF7Q15545 349 aaPredicted RBP19.74■□□□□ 0.75
SCAF8-201ENST00000367178 AMOTQ4VCS5 1084 aa19.74■□□□□ 0.75
SCAF8-201ENST00000367178 NACAP1Q9BZK3 213 aa19.74■□□□□ 0.75
SCAF8-201ENST00000367178 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
SCAF8-201ENST00000367178 MBD3O95983 291 aa19.74■□□□□ 0.75
SCAF8-201ENST00000367178 RARSP54136 660 aaKnown RBP19.74■□□□□ 0.75
SCAF8-201ENST00000367178 STARD3NLO95772 234 aa19.73■□□□□ 0.75
SCAF8-201ENST00000367178 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
SCAF8-201ENST00000367178 EXOC6BQ9Y2D4 811 aa19.73■□□□□ 0.75
SCAF8-201ENST00000367178 TRAK2O60296 914 aa19.72■□□□□ 0.75
SCAF8-201ENST00000367178 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
SCAF8-201ENST00000367178 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
SCAF8-201ENST00000367178 HOMER1Q86YM7 354 aa19.72■□□□□ 0.75
SCAF8-201ENST00000367178 ANKRD1Q15327 319 aa19.71■□□□□ 0.75
SCAF8-201ENST00000367178 ZSCAN25Q6NSZ9 544 aa19.71■□□□□ 0.75
SCAF8-201ENST00000367178 NAT10Q9H0A0 1025 aaKnown RBP19.71■□□□□ 0.75
SCAF8-201ENST00000367178 FIBPO43427 364 aa19.71■□□□□ 0.75
SCAF8-201ENST00000367178 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
SCAF8-201ENST00000367178 RNF214Q8ND24 703 aa19.7■□□□□ 0.74
SCAF8-201ENST00000367178 CWC22Q9HCG8 908 aaKnown RBP19.7■□□□□ 0.74
SCAF8-201ENST00000367178 CAVIN1Q6NZI2 390 aaKnown RBP19.7■□□□□ 0.74
SCAF8-201ENST00000367178 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
SCAF8-201ENST00000367178 ATP10BO94823 1461 aa19.7■□□□□ 0.74
SCAF8-201ENST00000367178 KINO60870 393 aaKnown RBP19.7■□□□□ 0.74
SCAF8-201ENST00000367178 CCDC85AQ96PX6 553 aaPredicted RBP19.7■□□□□ 0.74
SCAF8-201ENST00000367178 KDM5BQ9UGL1 1544 aa19.7■□□□□ 0.74
SCAF8-201ENST00000367178 PRPF40AO75400 957 aaKnown RBP19.7■□□□□ 0.74
SCAF8-201ENST00000367178 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
SCAF8-201ENST00000367178 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
SCAF8-201ENST00000367178 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
SCAF8-201ENST00000367178 CCDC70Q6NSX1 233 aa19.69■□□□□ 0.74
SCAF8-201ENST00000367178 NSD2O96028 1365 aa19.69■□□□□ 0.74
SCAF8-201ENST00000367178 TMOD3Q9NYL9 352 aa19.69■□□□□ 0.74
SCAF8-201ENST00000367178 MRE11P49959 708 aa19.68■□□□□ 0.74
SCAF8-201ENST00000367178 K7ELQ4 463 aaPredicted RBP19.68■□□□□ 0.74
SCAF8-201ENST00000367178 BLOC1S2Q6QNY1 142 aa19.68■□□□□ 0.74
SCAF8-201ENST00000367178 CWC27Q6UX04 472 aaKnown RBP19.68■□□□□ 0.74
SCAF8-201ENST00000367178 PLCH2O75038 1416 aa19.68■□□□□ 0.74
SCAF8-201ENST00000367178 STK3Q13188 491 aa19.68■□□□□ 0.74
SCAF8-201ENST00000367178 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
SCAF8-201ENST00000367178 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
SCAF8-201ENST00000367178 NASPP49321 788 aaPredicted RBP19.67■□□□□ 0.74
SCAF8-201ENST00000367178 STK38Q15208 465 aa19.67■□□□□ 0.74
SCAF8-201ENST00000367178 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
SCAF8-201ENST00000367178 KIF1BPQ96EK5 621 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms