RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
CNIH4-202ENST00000366857 KDM2BQ8NHM5 1336 aa12.48□□□□□ -0.41
CNIH4-202ENST00000366857 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
CNIH4-202ENST00000366857 LRP6O75581 1613 aa12.48□□□□□ -0.41
CNIH4-202ENST00000366857 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
CNIH4-202ENST00000366857 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
CNIH4-202ENST00000366857 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNIH4-202ENST00000366857 FBLN1P23142 703 aa12.47□□□□□ -0.41
CNIH4-202ENST00000366857 POGKQ9P215 609 aa12.47□□□□□ -0.41
CNIH4-202ENST00000366857 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
CNIH4-202ENST00000366857 TJP1Q07157 1748 aa12.45□□□□□ -0.42
CNIH4-202ENST00000366857 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
CNIH4-202ENST00000366857 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
CNIH4-202ENST00000366857 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
CNIH4-202ENST00000366857 FCHSD2O94868 740 aa12.44□□□□□ -0.42
CNIH4-202ENST00000366857 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
CNIH4-202ENST00000366857 CPDO75976 1380 aa12.44□□□□□ -0.42
CNIH4-202ENST00000366857 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
CNIH4-202ENST00000366857 FLT4P35916 1363 aa12.43□□□□□ -0.42
CNIH4-202ENST00000366857 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
CNIH4-202ENST00000366857 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
CNIH4-202ENST00000366857 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
CNIH4-202ENST00000366857 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
CNIH4-202ENST00000366857 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
CNIH4-202ENST00000366857 APAF1O14727 1248 aa12.42□□□□□ -0.42
CNIH4-202ENST00000366857 TCP11L2Q8N4U5 519 aa12.42□□□□□ -0.42
CNIH4-202ENST00000366857 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
CNIH4-202ENST00000366857 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
CNIH4-202ENST00000366857 TMPOP42166 694 aaKnown RBP12.41□□□□□ -0.42
CNIH4-202ENST00000366857 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
CNIH4-202ENST00000366857 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
CNIH4-202ENST00000366857 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
CNIH4-202ENST00000366857 POLR3GLQ9BT43 218 aa12.39□□□□□ -0.43
CNIH4-202ENST00000366857 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
CNIH4-202ENST00000366857 E9PSI1 815 aa12.38□□□□□ -0.43
CNIH4-202ENST00000366857 SOS2Q07890 1332 aaPredicted RBP12.38□□□□□ -0.43
CNIH4-202ENST00000366857 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
CNIH4-202ENST00000366857 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
CNIH4-202ENST00000366857 THSD7AQ9UPZ6 1657 aa12.37□□□□□ -0.43
CNIH4-202ENST00000366857 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
CNIH4-202ENST00000366857 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
CNIH4-202ENST00000366857 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
CNIH4-202ENST00000366857 ANKRD36CQ5JPF3 1778 aa12.36□□□□□ -0.43
CNIH4-202ENST00000366857 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
CNIH4-202ENST00000366857 HOXC9P31274 260 aa12.36□□□□□ -0.43
CNIH4-202ENST00000366857 A0A1B0GUL6 1792 aa12.36□□□□□ -0.43
CNIH4-202ENST00000366857 DISP2A7MBM2 1401 aa12.36□□□□□ -0.43
CNIH4-202ENST00000366857 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
CNIH4-202ENST00000366857 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
CNIH4-202ENST00000366857 KIAA0232Q92628 1395 aa12.35□□□□□ -0.43
CNIH4-202ENST00000366857 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
CNIH4-202ENST00000366857 FKBP8Q14318 412 aa12.35□□□□□ -0.43
CNIH4-202ENST00000366857 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
CNIH4-202ENST00000366857 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
CNIH4-202ENST00000366857 C19orf44Q9H6X5 657 aa12.34□□□□□ -0.43
CNIH4-202ENST00000366857 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
CNIH4-202ENST00000366857 RRS1Q15050 365 aaKnown RBP12.34□□□□□ -0.43
CNIH4-202ENST00000366857 MEGF6O75095 1541 aa12.34□□□□□ -0.43
CNIH4-202ENST00000366857 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
CNIH4-202ENST00000366857 BCORQ6W2J9 1755 aa12.33□□□□□ -0.44
CNIH4-202ENST00000366857 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
CNIH4-202ENST00000366857 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
CNIH4-202ENST00000366857 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
CNIH4-202ENST00000366857 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
CNIH4-202ENST00000366857 LAMB2P55268 1798 aa12.32□□□□□ -0.44
CNIH4-202ENST00000366857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
CNIH4-202ENST00000366857 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
CNIH4-202ENST00000366857 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
CNIH4-202ENST00000366857 AEBP1Q8IUX7 1158 aa12.31□□□□□ -0.44
CNIH4-202ENST00000366857 COG3Q96JB2 828 aa12.31□□□□□ -0.44
CNIH4-202ENST00000366857 SENP3Q9H4L4 574 aaPredicted RBP12.31□□□□□ -0.44
CNIH4-202ENST00000366857 LY75O60449 1722 aa12.31□□□□□ -0.44
CNIH4-202ENST00000366857 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
CNIH4-202ENST00000366857 IP6K1Q92551 441 aa12.3□□□□□ -0.44
CNIH4-202ENST00000366857 CHL1O00533 1208 aa12.3□□□□□ -0.44
CNIH4-202ENST00000366857 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
CNIH4-202ENST00000366857 EYA1Q99502 592 aa12.3□□□□□ -0.44
CNIH4-202ENST00000366857 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
CNIH4-202ENST00000366857 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
CNIH4-202ENST00000366857 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
CNIH4-202ENST00000366857 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
CNIH4-202ENST00000366857 BCAR3O75815 825 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 RLBP1P12271 317 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 VAMP4O75379 141 aa12.28□□□□□ -0.44
CNIH4-202ENST00000366857 PDE3AQ14432 1141 aa12.27□□□□□ -0.44
CNIH4-202ENST00000366857 BRINP3Q76B58 766 aa12.27□□□□□ -0.44
CNIH4-202ENST00000366857 ABCC4O15439 1325 aa12.27□□□□□ -0.44
CNIH4-202ENST00000366857 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
CNIH4-202ENST00000366857 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
CNIH4-202ENST00000366857 HTATSF1O43719 755 aaKnown RBP12.27□□□□□ -0.45
CNIH4-202ENST00000366857 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
CNIH4-202ENST00000366857 CFAP53Q96M91 514 aa12.26□□□□□ -0.45
CNIH4-202ENST00000366857 DDX60Q8IY21 1712 aaKnown RBP12.26□□□□□ -0.45
CNIH4-202ENST00000366857 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
CNIH4-202ENST00000366857 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
CNIH4-202ENST00000366857 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms