RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 MPNDQ8N594 471 aa9.33□□□□□ -0.92
RNU4-4P-201ENST00000364588 FOXJ1Q92949 421 aa9.33□□□□□ -0.92
RNU4-4P-201ENST00000364588 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
RNU4-4P-201ENST00000364588 SIAH2O43255 324 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 AVPP01185 164 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 PDXDC2PQ6P474 469 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 TLL2Q9Y6L7 1015 aa9.32□□□□□ -0.92
RNU4-4P-201ENST00000364588 SMPD1P17405 629 aa9.31□□□□□ -0.92
RNU4-4P-201ENST00000364588 CHMP7Q8WUX9 453 aaPredicted RBP9.31□□□□□ -0.92
RNU4-4P-201ENST00000364588 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
RNU4-4P-201ENST00000364588 GPSM3Q9Y4H4 160 aa9.31□□□□□ -0.92
RNU4-4P-201ENST00000364588 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
RNU4-4P-201ENST00000364588 WDR97A6NE52 1622 aa9.31□□□□□ -0.92
RNU4-4P-201ENST00000364588 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
RNU4-4P-201ENST00000364588 J3QL48 77 aa9.3□□□□□ -0.92
RNU4-4P-201ENST00000364588 CRIPAKQ8N1N5 446 aa9.3□□□□□ -0.92
RNU4-4P-201ENST00000364588 CLASP1Q7Z460 1538 aa9.3□□□□□ -0.92
RNU4-4P-201ENST00000364588 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 GRIN2BQ13224 1484 aa9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 MAGI1Q96QZ7 1491 aaPredicted RBP9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 SUPT5HO00267 1087 aaKnown RBP9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 MYT1Q01538 1121 aa9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 PTK2Q05397 1052 aa9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 ARHGAP9Q9BRR9 750 aa9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
RNU4-4P-201ENST00000364588 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
RNU4-4P-201ENST00000364588 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
RNU4-4P-201ENST00000364588 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
RNU4-4P-201ENST00000364588 LCE2BO14633 110 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 ADH1CP00326 375 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 SLC10A4Q96EP9 437 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 CDK15Q96Q40 435 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 MAP4K5Q9Y4K4 846 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 SYNJ2O15056 1496 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
RNU4-4P-201ENST00000364588 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
RNU4-4P-201ENST00000364588 MTMR14Q8NCE2 650 aa9.26□□□□□ -0.93
RNU4-4P-201ENST00000364588 GJD4Q96KN9 370 aaPredicted RBP9.26□□□□□ -0.93
RNU4-4P-201ENST00000364588 NDUFB9Q9Y6M9 179 aa9.26□□□□□ -0.93
RNU4-4P-201ENST00000364588 AXIN1O15169 862 aa9.25□□□□□ -0.93
RNU4-4P-201ENST00000364588 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
RNU4-4P-201ENST00000364588 PRM3Q9NNZ6 103 aa9.25□□□□□ -0.93
RNU4-4P-201ENST00000364588 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
RNU4-4P-201ENST00000364588 NR5A1Q13285 461 aa9.24□□□□□ -0.93
RNU4-4P-201ENST00000364588 NNTQ13423 1086 aa9.24□□□□□ -0.93
RNU4-4P-201ENST00000364588 ARID5BQ14865 1188 aa9.24□□□□□ -0.93
RNU4-4P-201ENST00000364588 TMEM132AQ24JP5 1023 aa9.24□□□□□ -0.93
RNU4-4P-201ENST00000364588 AAASQ9NRG9 546 aa9.24□□□□□ -0.93
RNU4-4P-201ENST00000364588 ABCA10Q8WWZ4 1543 aa9.23□□□□□ -0.93
RNU4-4P-201ENST00000364588 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
RNU4-4P-201ENST00000364588 VASH1Q7L8A9 365 aaPredicted RBP9.23□□□□□ -0.93
RNU4-4P-201ENST00000364588 HPS1Q92902 700 aa9.23□□□□□ -0.93
RNU4-4P-201ENST00000364588 FSHRP23945 695 aa9.22□□□□□ -0.93
RNU4-4P-201ENST00000364588 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
RNU4-4P-201ENST00000364588 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
RNU4-4P-201ENST00000364588 ADAM32Q8TC27 787 aa9.21□□□□□ -0.94
RNU4-4P-201ENST00000364588 SNRKQ9NRH2 765 aa9.21□□□□□ -0.94
RNU4-4P-201ENST00000364588 ZBBXA8MT70 800 aa9.2□□□□□ -0.94
RNU4-4P-201ENST00000364588 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
RNU4-4P-201ENST00000364588 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
RNU4-4P-201ENST00000364588 WRNQ14191 1432 aaPredicted RBP eCLIP9.19□□□□□ -0.94
RNU4-4P-201ENST00000364588 BIVM-ERCC5R4GMW8 1640 aa9.19□□□□□ -0.94
RNU4-4P-201ENST00000364588 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
RNU4-4P-201ENST00000364588 ADAMTS12P58397 1594 aa9.18□□□□□ -0.94
RNU4-4P-201ENST00000364588 TOP2BQ02880 1626 aa9.18□□□□□ -0.94
RNU4-4P-201ENST00000364588 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
RNU4-4P-201ENST00000364588 MCM6Q14566 821 aa9.18□□□□□ -0.94
RNU4-4P-201ENST00000364588 ERCC6L2Q5T890 1561 aa9.18□□□□□ -0.94
RNU4-4P-201ENST00000364588 WDR4P57081 412 aaKnown RBP9.17□□□□□ -0.94
RNU4-4P-201ENST00000364588 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
RNU4-4P-201ENST00000364588 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
RNU4-4P-201ENST00000364588 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
RNU4-4P-201ENST00000364588 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
RNU4-4P-201ENST00000364588 GRM5P41594 1212 aa9.16□□□□□ -0.94
RNU4-4P-201ENST00000364588 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
RNU4-4P-201ENST00000364588 NR1H3Q13133 447 aa9.16□□□□□ -0.94
RNU4-4P-201ENST00000364588 KCTD15Q96SI1 283 aaPredicted RBP9.16□□□□□ -0.94
RNU4-4P-201ENST00000364588 GPR37L1O60883 481 aa9.15□□□□□ -0.94
RNU4-4P-201ENST00000364588 NR3C2P08235 984 aa9.15□□□□□ -0.94
RNU4-4P-201ENST00000364588 TIMP2P16035 220 aa9.15□□□□□ -0.94
RNU4-4P-201ENST00000364588 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
RNU4-4P-201ENST00000364588 EMILIN1Q9Y6C2 1016 aa9.15□□□□□ -0.94
RNU4-4P-201ENST00000364588 NUP160Q12769 1436 aa9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 FLIIQ13045 1269 aa9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 TRIM52Q96A61 297 aa9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 SENP2Q9HC62 589 aa9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
RNU4-4P-201ENST00000364588 ZIC2O95409 532 aaPredicted RBP9.13□□□□□ -0.95
RNU4-4P-201ENST00000364588 ZNF787Q6DD87 383 aa9.13□□□□□ -0.95
RNU4-4P-201ENST00000364588 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
RNU4-4P-201ENST00000364588 PCDHB9Q9Y5E1 797 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms