RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 CFAP53Q96M91 514 aa10.46□□□□□ -0.74
CD46-206ENST00000360212 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.74
CD46-206ENST00000360212 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.74
CD46-206ENST00000360212 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.74
CD46-206ENST00000360212 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
CD46-206ENST00000360212 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
CD46-206ENST00000360212 UPF3BQ9BZI7 483 aaKnown RBP10.45□□□□□ -0.74
CD46-206ENST00000360212 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
CD46-206ENST00000360212 NGEFQ8N5V2 710 aa10.45□□□□□ -0.74
CD46-206ENST00000360212 IPO8O15397 1037 aaKnown RBP10.44□□□□□ -0.74
CD46-206ENST00000360212 MBD3O95983 291 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 ADGRL2O95490 1459 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 KCNF1Q9H3M0 494 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 NSD3Q9BZ95 1437 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 IQGAP2Q13576 1575 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
CD46-206ENST00000360212 AP5Z1O43299 807 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 NCBP1Q09161 790 aaKnown RBP10.44□□□□□ -0.74
CD46-206ENST00000360212 LRMPQ12912 555 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
CD46-206ENST00000360212 FIBPO43427 364 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
CD46-206ENST00000360212 GTF2F1P35269 517 aaKnown RBP eCLIP10.43□□□□□ -0.74
CD46-206ENST00000360212 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 CWC22Q9HCG8 908 aaKnown RBP10.43□□□□□ -0.74
CD46-206ENST00000360212 IFT57Q9NWB7 429 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 KCNG1Q9UIX4 513 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 APPP05067 770 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 SDSP20132 328 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 PTGS1P23219 599 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 TMPOP42166 694 aaKnown RBP10.43□□□□□ -0.74
CD46-206ENST00000360212 DRC7Q8IY82 874 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 CNPY4Q8N129 248 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 PHF23Q9BUL5 403 aaPredicted RBP10.43□□□□□ -0.74
CD46-206ENST00000360212 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 DIAPH3Q9NSV4 1193 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 TRIM35Q9UPQ4 493 aa10.43□□□□□ -0.74
CD46-206ENST00000360212 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
CD46-206ENST00000360212 ZBTB7BO15156 539 aaPredicted RBP10.42□□□□□ -0.74
CD46-206ENST00000360212 TSPYL6Q8N831 410 aa10.42□□□□□ -0.74
CD46-206ENST00000360212 SYAP1Q96A49 352 aaPredicted RBP10.42□□□□□ -0.74
CD46-206ENST00000360212 HDAC5Q9UQL6 1122 aa10.42□□□□□ -0.74
CD46-206ENST00000360212 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
CD46-206ENST00000360212 FBLN1P23142 703 aa10.42□□□□□ -0.74
CD46-206ENST00000360212 SRPK2P78362 688 aaKnown RBP10.42□□□□□ -0.74
CD46-206ENST00000360212 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
CD46-206ENST00000360212 OGFRQ9NZT2 677 aa10.42□□□□□ -0.74
CD46-206ENST00000360212 POLR3AO14802 1390 aaPredicted RBP10.42□□□□□ -0.74
CD46-206ENST00000360212 SLFN14P0C7P3 912 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 GCC1Q96CN9 775 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 INTS3Q68E01 1043 aaKnown RBP10.41□□□□□ -0.74
CD46-206ENST00000360212 TMEM132EQ6IEE7 984 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 KIAA1524Q8TCG1 905 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 ANKRD7Q92527 254 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 GGNBP2Q9H3C7 697 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 TMX1Q9H3N1 280 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 SLC52A1Q9NWF4 448 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
CD46-206ENST00000360212 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
CD46-206ENST00000360212 NUTM2DQ5VT03 806 aaPredicted RBP10.4□□□□□ -0.74
CD46-206ENST00000360212 ADGBQ8N7X0 1667 aa10.4□□□□□ -0.74
CD46-206ENST00000360212 TTC22Q5TAA0 569 aa10.4□□□□□ -0.74
CD46-206ENST00000360212 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
CD46-206ENST00000360212 CTNNA3Q9UI47 895 aa10.4□□□□□ -0.74
CD46-206ENST00000360212 PALD1Q9ULE6 856 aa10.4□□□□□ -0.74
CD46-206ENST00000360212 KDM4AO75164 1064 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 CAMK4Q16566 473 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 SPTLC3Q9NUV7 552 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
CD46-206ENST00000360212 SYNMO15061 1565 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 PHF14O94880 888 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 SYTL4Q96C24 671 aaPredicted RBP10.39□□□□□ -0.75
CD46-206ENST00000360212 TIGD1Q96MW7 591 aa10.39□□□□□ -0.75
CD46-206ENST00000360212 BRD1O95696 1058 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 TNNT1P13805 278 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 CAPN2P17655 700 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 SLC20A2Q08357 652 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 CASC1Q6TDU7 716 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 CCDC186Q7Z3E2 898 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 ANO2Q9NQ90 1003 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 ADGRF5Q8IZF2 1346 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 PTPRGP23470 1445 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 PLXNC1O60486 1568 aa10.38□□□□□ -0.75
CD46-206ENST00000360212 BCCIPQ9P287 314 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD46-206ENST00000360212 TERF2Q15554 542 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 KRT24Q2M2I5 525 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 FEZ1Q99689 392 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 SCAF11Q99590 1463 aaKnown RBP10.37□□□□□ -0.75
CD46-206ENST00000360212 HMOX1P09601 288 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 GTF3C6Q969F1 213 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 ABCC10Q5T3U5 1492 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 CCDC66A2RUB6 948 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
CD46-206ENST00000360212 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms