RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 NASPP49321 788 aaPredicted RBP29.42■■■□□ 2.3
NPAS3-203ENST00000357798 CFAP44Q96MT7 982 aa29.41■■■□□ 2.3
NPAS3-203ENST00000357798 RBM42Q9BTD8 480 aaKnown RBP29.41■■■□□ 2.3
NPAS3-203ENST00000357798 BAG4O95429 457 aaKnown RBP29.41■■■□□ 2.3
NPAS3-203ENST00000357798 GGT6Q6P531 493 aa29.41■■■□□ 2.3
NPAS3-203ENST00000357798 ASXL2Q76L83 1435 aa29.4■■■□□ 2.3
NPAS3-203ENST00000357798 ABCC4O15439 1325 aa29.4■■■□□ 2.3
NPAS3-203ENST00000357798 PTPRMP28827 1452 aa29.4■■■□□ 2.3
NPAS3-203ENST00000357798 POGZQ7Z3K3 1410 aa29.4■■■□□ 2.3
NPAS3-203ENST00000357798 VAMP4O75379 141 aa29.39■■■□□ 2.3
NPAS3-203ENST00000357798 SAFB2Q14151 953 aaKnown RBP eCLIP29.39■■■□□ 2.3
NPAS3-203ENST00000357798 ANP32BQ92688 251 aaKnown RBP29.39■■■□□ 2.3
NPAS3-203ENST00000357798 CALD1Q05682 793 aaKnown RBP29.38■■■□□ 2.29
NPAS3-203ENST00000357798 ZSCAN30Q86W11 494 aa29.38■■■□□ 2.29
NPAS3-203ENST00000357798 SIRT2Q8IXJ6 389 aa29.38■■■□□ 2.29
NPAS3-203ENST00000357798 DDX49Q9Y6V7 483 aaKnown RBP29.38■■■□□ 2.29
NPAS3-203ENST00000357798 RABEP1Q15276 862 aa29.37■■■□□ 2.29
NPAS3-203ENST00000357798 C1orf115Q9H7X2 142 aa29.37■■■□□ 2.29
NPAS3-203ENST00000357798 NUTM2DQ5VT03 806 aaPredicted RBP29.37■■■□□ 2.29
NPAS3-203ENST00000357798 ZNF445P59923 1031 aa29.35■■■□□ 2.29
NPAS3-203ENST00000357798 PRKAR2BP31323 418 aa29.35■■■□□ 2.29
NPAS3-203ENST00000357798 NUCB2P80303 420 aa29.34■■■□□ 2.29
NPAS3-203ENST00000357798 NFE2L2Q16236 605 aa29.34■■■□□ 2.29
NPAS3-203ENST00000357798 HDGFL2Q7Z4V5 671 aaPredicted RBP29.34■■■□□ 2.29
NPAS3-203ENST00000357798 KIF24Q5T7B8 1368 aa29.32■■■□□ 2.28
NPAS3-203ENST00000357798 IFT57Q9NWB7 429 aa29.32■■■□□ 2.28
NPAS3-203ENST00000357798 GNAI1P63096 354 aa29.32■■■□□ 2.28
NPAS3-203ENST00000357798 AK9Q5TCS8 1911 aa29.31■■■□□ 2.28
NPAS3-203ENST00000357798 GSPT1P15170 499 aaKnown RBP29.31■■■□□ 2.28
NPAS3-203ENST00000357798 CYP2E1P05181 493 aaPredicted RBP29.3■■■□□ 2.28
NPAS3-203ENST00000357798 VSIG10Q8N0Z9 540 aa29.3■■■□□ 2.28
NPAS3-203ENST00000357798 STK26Q9P289 416 aa29.3■■■□□ 2.28
NPAS3-203ENST00000357798 YEATS2Q9ULM3 1422 aa29.3■■■□□ 2.28
NPAS3-203ENST00000357798 OFD1O75665 1012 aa29.3■■■□□ 2.28
NPAS3-203ENST00000357798 HS1BP3Q53T59 392 aa29.3■■■□□ 2.28
NPAS3-203ENST00000357798 KNDC1Q76NI1 1749 aa29.29■■■□□ 2.28
NPAS3-203ENST00000357798 API5Q9BZZ5 524 aaKnown RBP29.29■■■□□ 2.28
NPAS3-203ENST00000357798 KIAA1211Q6ZU35 1233 aa29.29■■■□□ 2.28
NPAS3-203ENST00000357798 PLEKHM2Q8IWE5 1019 aa29.29■■■□□ 2.28
NPAS3-203ENST00000357798 MINK1Q8N4C8 1332 aaPredicted RBP29.28■■■□□ 2.28
NPAS3-203ENST00000357798 ZNF853P0CG23 659 aa29.28■■■□□ 2.28
NPAS3-203ENST00000357798 TSPYL6Q8N831 410 aa29.28■■■□□ 2.28
NPAS3-203ENST00000357798 TERF1P54274 439 aa29.27■■■□□ 2.28
NPAS3-203ENST00000357798 PKNOX2Q96KN3 472 aa29.27■■■□□ 2.28
NPAS3-203ENST00000357798 MSNP26038 577 aaKnown RBP29.27■■■□□ 2.28
NPAS3-203ENST00000357798 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.27■■■□□ 2.28
NPAS3-203ENST00000357798 TTC22Q5TAA0 569 aa29.26■■■□□ 2.28
NPAS3-203ENST00000357798 MYO5BQ9ULV0 1848 aa29.26■■■□□ 2.27
NPAS3-203ENST00000357798 YTHDC2Q9H6S0 1430 aaKnown RBP29.25■■■□□ 2.27
NPAS3-203ENST00000357798 MCTP1Q6DN14 999 aa29.25■■■□□ 2.27
NPAS3-203ENST00000357798 PRAM1Q96QH2 718 aa29.25■■■□□ 2.27
NPAS3-203ENST00000357798 DCTPP1Q9H773 170 aa29.25■■■□□ 2.27
NPAS3-203ENST00000357798 CWC22Q9HCG8 908 aaKnown RBP29.25■■■□□ 2.27
NPAS3-203ENST00000357798 LMBRD1Q9NUN5 540 aa29.25■■■□□ 2.27
NPAS3-203ENST00000357798 USP26Q9BXU7 913 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 MBIPQ9NS73 344 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 ARHGEF40Q8TER5 1519 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 ZSCAN23Q3MJ62 389 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 PHACTR3Q96KR7 559 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 PDCL3Q9H2J4 239 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 POLKQ9UBT6 870 aa29.24■■■□□ 2.27
NPAS3-203ENST00000357798 MAP2P11137 1827 aaKnown RBP29.23■■■□□ 2.27
NPAS3-203ENST00000357798 TWISTNBQ3B726 338 aaPredicted RBP29.22■■■□□ 2.27
NPAS3-203ENST00000357798 THUMPD2Q9BTF0 503 aaKnown RBP29.22■■■□□ 2.27
NPAS3-203ENST00000357798 INTS3Q68E01 1043 aaKnown RBP29.22■■■□□ 2.27
NPAS3-203ENST00000357798 IDI1Q13907 227 aa29.21■■■□□ 2.27
NPAS3-203ENST00000357798 ZMYND15Q9H091 742 aa29.21■■■□□ 2.27
NPAS3-203ENST00000357798 CAVIN1Q6NZI2 390 aaKnown RBP29.21■■■□□ 2.27
NPAS3-203ENST00000357798 DLG5Q8TDM6 1919 aa29.21■■■□□ 2.27
NPAS3-203ENST00000357798 SLC52A1Q9NWF4 448 aa29.2■■■□□ 2.27
NPAS3-203ENST00000357798 PDLIM2Q96JY6 352 aa29.2■■■□□ 2.26
NPAS3-203ENST00000357798 TMEM131LA2VDJ0 1609 aa29.2■■■□□ 2.26
NPAS3-203ENST00000357798 ATP7BP35670 1465 aa29.19■■■□□ 2.26
NPAS3-203ENST00000357798 LMOD3Q0VAK6 560 aa29.19■■■□□ 2.26
NPAS3-203ENST00000357798 CDK19Q9BWU1 502 aa29.18■■■□□ 2.26
NPAS3-203ENST00000357798 CABP1Q9NZU7 370 aa29.18■■■□□ 2.26
NPAS3-203ENST00000357798 HMOX1P09601 288 aa29.17■■■□□ 2.26
NPAS3-203ENST00000357798 ELL2O00472 640 aaPredicted RBP29.16■■■□□ 2.26
NPAS3-203ENST00000357798 ST18O60284 1047 aa29.16■■■□□ 2.26
NPAS3-203ENST00000357798 NCLP19338 710 aaKnown RBP29.16■■■□□ 2.26
NPAS3-203ENST00000357798 NOL7Q9UMY1 257 aaKnown RBP29.16■■■□□ 2.26
NPAS3-203ENST00000357798 RBSNQ9H1K0 784 aa29.16■■■□□ 2.26
NPAS3-203ENST00000357798 CDK12Q9NYV4 1490 aaPredicted RBP29.16■■■□□ 2.26
NPAS3-203ENST00000357798 ZNF500O60304 480 aaPredicted RBP29.15■■■□□ 2.26
NPAS3-203ENST00000357798 CASC1Q6TDU7 716 aa29.15■■■□□ 2.26
NPAS3-203ENST00000357798 ANKRD44Q8N8A2 993 aa29.15■■■□□ 2.26
NPAS3-203ENST00000357798 C8orf58Q8NAV2 365 aa29.15■■■□□ 2.26
NPAS3-203ENST00000357798 ATP10DQ9P241 1426 aa29.15■■■□□ 2.26
NPAS3-203ENST00000357798 DIP2CQ9Y2E4 1556 aa29.13■■■□□ 2.25
NPAS3-203ENST00000357798 RIMS2Q9UQ26 1411 aa29.13■■■□□ 2.25
NPAS3-203ENST00000357798 IL13P35225 146 aa29.13■■■□□ 2.25
NPAS3-203ENST00000357798 CPSF1Q10570 1443 aaKnown RBP29.13■■■□□ 2.25
NPAS3-203ENST00000357798 PREX1Q8TCU6 1659 aa29.12■■■□□ 2.25
NPAS3-203ENST00000357798 ALKQ9UM73 1620 aa29.12■■■□□ 2.25
NPAS3-203ENST00000357798 PKP1Q13835 747 aa29.12■■■□□ 2.25
NPAS3-203ENST00000357798 RPAP2Q8IXW5 612 aaPredicted RBP29.11■■■□□ 2.25
NPAS3-203ENST00000357798 PRIM1P49642 420 aaKnown RBP29.1■■■□□ 2.25
NPAS3-203ENST00000357798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.1■■■□□ 2.25
NPAS3-203ENST00000357798 C16orf71Q8IYS4 520 aaPredicted RBP29.1■■■□□ 2.25
NPAS3-203ENST00000357798 GPT2Q8TD30 523 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms