RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 MAP2P11137 1827 aaKnown RBP19.19■□□□□ 0.66
PTBP1-203ENST00000356948 NUDT16Q96DE0 195 aaKnown RBP19.18■□□□□ 0.66
PTBP1-203ENST00000356948 CT47B1P0C2W7 299 aaPredicted RBP19.18■□□□□ 0.66
PTBP1-203ENST00000356948 IL16Q14005 1332 aa19.18■□□□□ 0.66
PTBP1-203ENST00000356948 WASLO00401 505 aaPredicted RBP19.18■□□□□ 0.66
PTBP1-203ENST00000356948 AAMPQ13685 434 aa19.18■□□□□ 0.66
PTBP1-203ENST00000356948 MED14O60244 1454 aa19.18■□□□□ 0.66
PTBP1-203ENST00000356948 KIF16BQ96L93 1317 aa19.17■□□□□ 0.66
PTBP1-203ENST00000356948 MCM10Q7L590 875 aa19.17■□□□□ 0.66
PTBP1-203ENST00000356948 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
PTBP1-203ENST00000356948 CPS1P31327 1500 aa19.17■□□□□ 0.66
PTBP1-203ENST00000356948 IPO8O15397 1037 aaKnown RBP19.16■□□□□ 0.66
PTBP1-203ENST00000356948 PANK2Q9BZ23 570 aa19.16■□□□□ 0.66
PTBP1-203ENST00000356948 PRR36Q9H6K5 1346 aa19.16■□□□□ 0.66
PTBP1-203ENST00000356948 OTUD7AQ8TE49 926 aaPredicted RBP19.16■□□□□ 0.66
PTBP1-203ENST00000356948 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
PTBP1-203ENST00000356948 A2ML1A8K2U0 1454 aa19.15■□□□□ 0.66
PTBP1-203ENST00000356948 KIF2CQ99661 725 aa19.14■□□□□ 0.65
PTBP1-203ENST00000356948 ALDH1L2Q3SY69 923 aa19.13■□□□□ 0.65
PTBP1-203ENST00000356948 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
PTBP1-203ENST00000356948 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
PTBP1-203ENST00000356948 FOXO3O43524 673 aa19.13■□□□□ 0.65
PTBP1-203ENST00000356948 MCM4P33991 863 aa19.13■□□□□ 0.65
PTBP1-203ENST00000356948 HSP90AB2PQ58FF8 381 aa19.12■□□□□ 0.65
PTBP1-203ENST00000356948 ZNF692Q9BU19 519 aaPredicted RBP19.12■□□□□ 0.65
PTBP1-203ENST00000356948 ZNF853P0CG23 659 aa19.12■□□□□ 0.65
PTBP1-203ENST00000356948 COG3Q96JB2 828 aa19.12■□□□□ 0.65
PTBP1-203ENST00000356948 SMARCA5O60264 1052 aaPredicted RBP19.11■□□□□ 0.65
PTBP1-203ENST00000356948 TBC1D9Q6ZT07 1266 aa19.11■□□□□ 0.65
PTBP1-203ENST00000356948 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
PTBP1-203ENST00000356948 KIF20BQ96Q89 1820 aa19.11■□□□□ 0.65
PTBP1-203ENST00000356948 CLTCQ00610 1675 aaKnown RBP19.1■□□□□ 0.65
PTBP1-203ENST00000356948 GSPT1P15170 499 aaKnown RBP19.09■□□□□ 0.65
PTBP1-203ENST00000356948 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
PTBP1-203ENST00000356948 GNAI1P63096 354 aa19.08■□□□□ 0.65
PTBP1-203ENST00000356948 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.65
PTBP1-203ENST00000356948 IFT57Q9NWB7 429 aa19.08■□□□□ 0.65
PTBP1-203ENST00000356948 CCDC61Q9Y6R9 512 aa19.08■□□□□ 0.65
PTBP1-203ENST00000356948 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
PTBP1-203ENST00000356948 HSCBQ8IWL3 235 aa19.08■□□□□ 0.64
PTBP1-203ENST00000356948 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
PTBP1-203ENST00000356948 ARID3AQ99856 593 aa19.08■□□□□ 0.64
PTBP1-203ENST00000356948 PNNQ9H307 717 aaKnown RBP19.08■□□□□ 0.64
PTBP1-203ENST00000356948 XRCC6P12956 609 aaKnown RBP eCLIP19.07■□□□□ 0.645e-10■□□□□ 9.2
PTBP1-203ENST00000356948 CEBPAP49715 358 aaPredicted RBP19.07■□□□□ 0.64
PTBP1-203ENST00000356948 TRAK2O60296 914 aa19.06■□□□□ 0.64
PTBP1-203ENST00000356948 HSP90AA2PQ14568 343 aaPredicted RBP19.06■□□□□ 0.64
PTBP1-203ENST00000356948 RRAGDQ9NQL2 400 aaPredicted RBP19.06■□□□□ 0.64
PTBP1-203ENST00000356948 ABCC4O15439 1325 aa19.06■□□□□ 0.64
PTBP1-203ENST00000356948 NECTIN2Q92692 538 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 CHMP5Q9NZZ3 219 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 ROBO2Q9HCK4 1378 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 F6X3S4 739 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
PTBP1-203ENST00000356948 DLG5Q8TDM6 1919 aa19.04■□□□□ 0.64
PTBP1-203ENST00000356948 BMP2KLQ5H9B9 411 aa19.04■□□□□ 0.64
PTBP1-203ENST00000356948 TSHZ3Q63HK5 1081 aa19.04■□□□□ 0.64
PTBP1-203ENST00000356948 ZMYND15Q9H091 742 aa19.04■□□□□ 0.64
PTBP1-203ENST00000356948 RBM25P49756 843 aaKnown RBP19.04■□□□□ 0.64
PTBP1-203ENST00000356948 NUTM2GQ5VZR2 741 aa19.04■□□□□ 0.64
PTBP1-203ENST00000356948 TNPO1Q92973 898 aaKnown RBP19.03■□□□□ 0.64
PTBP1-203ENST00000356948 ZMYM3Q14202 1370 aa19.03■□□□□ 0.64
PTBP1-203ENST00000356948 EDC4Q6P2E9 1401 aaKnown RBP19.03■□□□□ 0.64
PTBP1-203ENST00000356948 G2E3Q7L622 706 aa19.03■□□□□ 0.64
PTBP1-203ENST00000356948 MEIS3Q99687 375 aa19.03■□□□□ 0.64
PTBP1-203ENST00000356948 ACEP12821 1306 aa19.03■□□□□ 0.64
PTBP1-203ENST00000356948 ATP7BP35670 1465 aa19.02■□□□□ 0.64
PTBP1-203ENST00000356948 LTKP29376 864 aa19.02■□□□□ 0.64
PTBP1-203ENST00000356948 CHAMP1Q96JM3 812 aa19.02■□□□□ 0.64
PTBP1-203ENST00000356948 HSP90AB1P08238 724 aaKnown RBP19.02■□□□□ 0.64
PTBP1-203ENST00000356948 PLEKHM2Q8IWE5 1019 aa19.02■□□□□ 0.64
PTBP1-203ENST00000356948 KNDC1Q76NI1 1749 aa19.02■□□□□ 0.64
PTBP1-203ENST00000356948 NRXN3Q9Y4C0 1643 aa19.02■□□□□ 0.63
PTBP1-203ENST00000356948 GAS2L2Q8NHY3 880 aa19.02■□□□□ 0.63
PTBP1-203ENST00000356948 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
PTBP1-203ENST00000356948 HSP90AA1P07900 732 aaKnown RBP19.01■□□□□ 0.63
PTBP1-203ENST00000356948 DDIT3P35638 169 aa19.01■□□□□ 0.63
PTBP1-203ENST00000356948 SETD1AO15047 1707 aaKnown RBP19.01■□□□□ 0.63
PTBP1-203ENST00000356948 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
PTBP1-203ENST00000356948 BRPF1P55201 1214 aaPredicted RBP19■□□□□ 0.63
PTBP1-203ENST00000356948 SLC4A10Q6U841 1118 aa19■□□□□ 0.63
PTBP1-203ENST00000356948 GCC1Q96CN9 775 aa18.99■□□□□ 0.63
PTBP1-203ENST00000356948 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
PTBP1-203ENST00000356948 ARHGAP45Q92619 1136 aa18.99■□□□□ 0.63
PTBP1-203ENST00000356948 ESF1Q9H501 851 aaKnown RBP18.99■□□□□ 0.63
PTBP1-203ENST00000356948 GAS2L3Q86XJ1 694 aa18.98■□□□□ 0.63
PTBP1-203ENST00000356948 TTC21BQ7Z4L5 1316 aa18.98■□□□□ 0.63
PTBP1-203ENST00000356948 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
PTBP1-203ENST00000356948 SSFA2P28290 1259 aa18.98■□□□□ 0.63
PTBP1-203ENST00000356948 PKP1Q13835 747 aa18.98■□□□□ 0.63
PTBP1-203ENST00000356948 MSH6P52701 1360 aa18.97■□□□□ 0.63
PTBP1-203ENST00000356948 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
PTBP1-203ENST00000356948 AK9Q5TCS8 1911 aa18.97■□□□□ 0.63
PTBP1-203ENST00000356948 DLC1Q96QB1 1528 aa18.97■□□□□ 0.63
PTBP1-203ENST00000356948 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
PTBP1-203ENST00000356948 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
PTBP1-203ENST00000356948 GOLGA6L3A6NEY3 463 aa18.96■□□□□ 0.63
PTBP1-203ENST00000356948 RGS12O14924 1447 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms