RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 COL22A1Q8NFW1 1626 aaPredicted RBP5.63□□□□□ -1.51
CNOT4-202ENST00000356162 TRPM3Q9HCF6 1732 aaPredicted RBP5.63□□□□□ -1.51
CNOT4-202ENST00000356162 PXDNQ92626 1479 aa5.63□□□□□ -1.51
CNOT4-202ENST00000356162 HSPA1LP34931 641 aa5.62□□□□□ -1.51
CNOT4-202ENST00000356162 POTEGQ6S5H5 508 aa5.62□□□□□ -1.51
CNOT4-202ENST00000356162 HS6ST3Q8IZP7 471 aa5.62□□□□□ -1.51
CNOT4-202ENST00000356162 WASLO00401 505 aaPredicted RBP5.62□□□□□ -1.51
CNOT4-202ENST00000356162 USP47Q96K76 1375 aa5.62□□□□□ -1.51
CNOT4-202ENST00000356162 MED1Q15648 1581 aaPredicted RBP5.62□□□□□ -1.51
CNOT4-202ENST00000356162 AKAP12Q02952 1782 aa5.62□□□□□ -1.51
CNOT4-202ENST00000356162 JCADQ9P266 1359 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 ABCA3Q99758 1704 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 SNPHO15079 494 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 ALS2Q96Q42 1657 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 NPHP3Q7Z494 1330 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 EVC2Q86UK5 1308 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 PRR36Q9H6K5 1346 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 ATAD2Q6PL18 1390 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 ST18O60284 1047 aa5.61□□□□□ -1.51
CNOT4-202ENST00000356162 HIRIP3Q9BW71 556 aaPredicted RBP5.61□□□□□ -1.51
CNOT4-202ENST00000356162 NRKQ7Z2Y5 1582 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 SOS2Q07890 1332 aaPredicted RBP5.6□□□□□ -1.51
CNOT4-202ENST00000356162 MON2Q7Z3U7 1717 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 ORAI2Q96SN7 254 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 TNS3Q68CZ2 1445 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 SBNO1A3KN83 1393 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 POLR3AO14802 1390 aaPredicted RBP5.6□□□□□ -1.51
CNOT4-202ENST00000356162 PNPLA6Q8IY17 1366 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 CRYBG1Q9Y4K1 1723 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 ESCO1Q5FWF5 840 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 CDK19Q9BWU1 502 aa5.6□□□□□ -1.51
CNOT4-202ENST00000356162 MARF1Q9Y4F3 1742 aaKnown RBP5.59□□□□□ -1.51
CNOT4-202ENST00000356162 PPIP5K1Q6PFW1 1433 aa5.59□□□□□ -1.51
CNOT4-202ENST00000356162 MYOM1P52179 1685 aa5.59□□□□□ -1.51
CNOT4-202ENST00000356162 USP54Q70EL1 1684 aa5.59□□□□□ -1.51
CNOT4-202ENST00000356162 BRD4O60885 1362 aaPredicted RBP5.59□□□□□ -1.51
CNOT4-202ENST00000356162 NINLQ9Y2I6 1382 aa5.59□□□□□ -1.51
CNOT4-202ENST00000356162 NUTM2FA1L443 756 aa5.59□□□□□ -1.52
CNOT4-202ENST00000356162 TMEM92Q6UXU6 159 aa5.59□□□□□ -1.52
CNOT4-202ENST00000356162 NUDT16Q96DE0 195 aaKnown RBP5.59□□□□□ -1.52
CNOT4-202ENST00000356162 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.52
CNOT4-202ENST00000356162 SPATA31A6Q5VVP1 1343 aa5.58□□□□□ -1.52
CNOT4-202ENST00000356162 PHRF1Q9P1Y6 1649 aaKnown RBP5.58□□□□□ -1.52
CNOT4-202ENST00000356162 SRPK2P78362 688 aaKnown RBP5.58□□□□□ -1.52
CNOT4-202ENST00000356162 TESK2Q96S53 571 aa5.58□□□□□ -1.52
CNOT4-202ENST00000356162 LRP6O75581 1613 aa5.58□□□□□ -1.52
CNOT4-202ENST00000356162 ARHGEF10O15013 1369 aa5.58□□□□□ -1.52
CNOT4-202ENST00000356162 PLEKHG3A1L390 1219 aa5.58□□□□□ -1.52
CNOT4-202ENST00000356162 LRRC59Q96AG4 307 aaKnown RBP5.58□□□□□ -1.52
CNOT4-202ENST00000356162 ST20-MTHFSA0A0A6YYL1 179 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 PSME1Q06323 249 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 DISP3Q9P2K9 1392 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 USP6P35125 1406 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 PIK3C2AO00443 1686 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 KRT28Q7Z3Y7 464 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 DDX17Q92841 729 aaKnown RBP5.57□□□□□ -1.52
CNOT4-202ENST00000356162 SPATA31A3Q5VYP0 1347 aa5.57□□□□□ -1.52
CNOT4-202ENST00000356162 FOXO3O43524 673 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 HOXB3P14651 431 aaPredicted RBP5.56□□□□□ -1.52
CNOT4-202ENST00000356162 EIF4G2P78344 907 aaKnown RBP eCLIP5.56□□□□□ -1.52
CNOT4-202ENST00000356162 TMF1P82094 1093 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 NGDNQ8NEJ9 315 aaKnown RBP5.56□□□□□ -1.52
CNOT4-202ENST00000356162 PMFBP1Q8TBY8 1022 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 CPSF1Q10570 1443 aaKnown RBP5.56□□□□□ -1.52
CNOT4-202ENST00000356162 CD163L1Q9NR16 1453 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.56□□□□□ -1.52
CNOT4-202ENST00000356162 ACEP12821 1306 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 CDCA8Q53HL2 280 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 SSH2Q76I76 1423 aa5.56□□□□□ -1.52
CNOT4-202ENST00000356162 KIF20BQ96Q89 1820 aa5.55□□□□□ -1.52
CNOT4-202ENST00000356162 PLCH1Q4KWH8 1693 aa5.55□□□□□ -1.52
CNOT4-202ENST00000356162 SLIT3O75094 1523 aa5.55□□□□□ -1.52
CNOT4-202ENST00000356162 PPP1R37O75864 691 aa5.55□□□□□ -1.52
CNOT4-202ENST00000356162 NKX1-1Q15270 411 aaPredicted RBP5.55□□□□□ -1.52
CNOT4-202ENST00000356162 NWD2Q9ULI1 1742 aa5.55□□□□□ -1.52
CNOT4-202ENST00000356162 EDC4Q6P2E9 1401 aaKnown RBP5.55□□□□□ -1.52
CNOT4-202ENST00000356162 HSPA5P11021 654 aaKnown RBP5.55□□□□□ -1.52
CNOT4-202ENST00000356162 XPCQ01831 940 aaPredicted RBP5.55□□□□□ -1.52
CNOT4-202ENST00000356162 COL14A1Q05707 1796 aaKnown RBP5.54□□□□□ -1.52
CNOT4-202ENST00000356162 ANKRD36BQ8N2N9 1353 aa5.54□□□□□ -1.52
CNOT4-202ENST00000356162 NRAPQ86VF7 1730 aa5.54□□□□□ -1.52
CNOT4-202ENST00000356162 A0A1W2PP64 1363 aa5.54□□□□□ -1.52
CNOT4-202ENST00000356162 USP19O94966 1318 aa5.54□□□□□ -1.52
CNOT4-202ENST00000356162 TTC21AQ8NDW8 1320 aa5.54□□□□□ -1.52
CNOT4-202ENST00000356162 CABP1Q9NZU7 370 aa5.54□□□□□ -1.52
CNOT4-202ENST00000356162 ABCC6O95255 1503 aa5.53□□□□□ -1.52
CNOT4-202ENST00000356162 ANKRD26Q9UPS8 1709 aa5.53□□□□□ -1.52
CNOT4-202ENST00000356162 KTN1Q86UP2 1357 aaKnown RBP5.53□□□□□ -1.52
CNOT4-202ENST00000356162 HDGFL2Q7Z4V5 671 aaPredicted RBP5.53□□□□□ -1.52
CNOT4-202ENST00000356162 KIF3CO14782 793 aa5.53□□□□□ -1.52
CNOT4-202ENST00000356162 DOK7Q18PE1 504 aa5.53□□□□□ -1.52
CNOT4-202ENST00000356162 MEX3CQ5U5Q3 659 aaKnown RBP5.53□□□□□ -1.52
CNOT4-202ENST00000356162 MARVELD3Q96A59 401 aa5.53□□□□□ -1.52
CNOT4-202ENST00000356162 TERF2IPQ9NYB0 399 aa5.53□□□□□ -1.52
CNOT4-202ENST00000356162 TTC21BQ7Z4L5 1316 aa5.52□□□□□ -1.53
CNOT4-202ENST00000356162 LMO7Q8WWI1 1683 aa5.52□□□□□ -1.53
CNOT4-202ENST00000356162 ZEB1P37275 1124 aaPredicted RBP5.52□□□□□ -1.53
CNOT4-202ENST00000356162 USP31Q70CQ4 1352 aa5.52□□□□□ -1.53
CNOT4-202ENST00000356162 NFAT5O94916 1531 aa5.52□□□□□ -1.53
CNOT4-202ENST00000356162 NUTM2BA6NNL0 878 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms