RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 CYP2C19P33261 490 aa8.35□□□□□ -1.07
MSR1-202ENST00000350896 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
MSR1-202ENST00000350896 TXLNBQ8N3L3 684 aa8.35□□□□□ -1.07
MSR1-202ENST00000350896 KIF18AQ8NI77 898 aa8.35□□□□□ -1.07
MSR1-202ENST00000350896 PSEN1P49768 467 aa8.35□□□□□ -1.07
MSR1-202ENST00000350896 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
MSR1-202ENST00000350896 KIF1BPQ96EK5 621 aa8.35□□□□□ -1.07
MSR1-202ENST00000350896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.34□□□□□ -1.07
MSR1-202ENST00000350896 TACO1Q9BSH4 297 aaKnown RBP8.34□□□□□ -1.07
MSR1-202ENST00000350896 POLR3GLQ9BT43 218 aa8.34□□□□□ -1.07
MSR1-202ENST00000350896 TARBP1Q13395 1621 aaKnown RBP8.34□□□□□ -1.07
MSR1-202ENST00000350896 SBNO2Q9Y2G9 1366 aa8.34□□□□□ -1.07
MSR1-202ENST00000350896 GPATCH8Q9UKJ3 1502 aaKnown RBP8.34□□□□□ -1.07
MSR1-202ENST00000350896 IFT140Q96RY7 1462 aa8.34□□□□□ -1.07
MSR1-202ENST00000350896 NEMFO60524 1076 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 CWC15Q9P013 229 aaKnown RBP8.33□□□□□ -1.08
MSR1-202ENST00000350896 MADDQ8WXG6 1647 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 ST18O60284 1047 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 NCBP1Q09161 790 aaKnown RBP8.33□□□□□ -1.08
MSR1-202ENST00000350896 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
MSR1-202ENST00000350896 GPT2Q8TD30 523 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
MSR1-202ENST00000350896 PIK3R4Q99570 1358 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 CEP152O94986 1710 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 C9orf84Q5VXU9 1444 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 KIF1CO43896 1103 aaKnown RBP8.33□□□□□ -1.08
MSR1-202ENST00000350896 MCTP1Q6DN14 999 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 IQUBQ8NA54 791 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 PSD3Q9NYI0 1048 aa8.33□□□□□ -1.08
MSR1-202ENST00000350896 SPHKAPQ2M3C7 1700 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 CDC45O75419 566 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 TEX35Q5T0J7 233 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 MYCBPQ99417 103 aaPredicted RBP8.32□□□□□ -1.08
MSR1-202ENST00000350896 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
MSR1-202ENST00000350896 HTATSF1O43719 755 aaKnown RBP8.32□□□□□ -1.08
MSR1-202ENST00000350896 HSP90B1P14625 803 aaKnown RBP8.32□□□□□ -1.08
MSR1-202ENST00000350896 BMS1Q14692 1282 aaKnown RBP8.32□□□□□ -1.08
MSR1-202ENST00000350896 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 GAS2L2Q8NHY3 880 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 PANK1Q8TE04 598 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
MSR1-202ENST00000350896 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 SLC26A8Q96RN1 970 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 NCAPGQ9BPX3 1015 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 MNS1Q8NEH6 495 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 TMEM63CQ9P1W3 806 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 ASXL2Q76L83 1435 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 ELP1O95163 1332 aa8.32□□□□□ -1.08
MSR1-202ENST00000350896 ABCA6Q8N139 1617 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
MSR1-202ENST00000350896 CAVIN2O95810 425 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 U2AF2P26368 475 aaKnown RBP eCLIP8.31□□□□□ -1.08
MSR1-202ENST00000350896 RASSF4Q9H2L5 321 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 NOS1P29475 1434 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 NUP155O75694 1391 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 KDM4AO75164 1064 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 CAPN2P17655 700 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 CCDC183Q5T5S1 534 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
MSR1-202ENST00000350896 KIAA0556O60303 1618 aa8.31□□□□□ -1.08
MSR1-202ENST00000350896 PPIP5K1Q6PFW1 1433 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 APAF1O14727 1248 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 NOP2P46087 812 aaKnown RBP8.3□□□□□ -1.08
MSR1-202ENST00000350896 GPS2Q13227 327 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 ALDH1L2Q3SY69 923 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 NOM1Q5C9Z4 860 aaKnown RBP8.3□□□□□ -1.08
MSR1-202ENST00000350896 CHD1LQ86WJ1 897 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 ERO1AQ96HE7 468 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 BRD1O95696 1058 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 TPM4P67936 248 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 MSL3Q8N5Y2 521 aaKnown RBP8.3□□□□□ -1.08
MSR1-202ENST00000350896 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 NSD2O96028 1365 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 NUP153P49790 1475 aaKnown RBP8.3□□□□□ -1.08
MSR1-202ENST00000350896 CUL4AQ13619 759 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 SPINK5Q9NQ38 1064 aaPredicted RBP8.3□□□□□ -1.08
MSR1-202ENST00000350896 ZBTB40Q9NUA8 1239 aa8.3□□□□□ -1.08
MSR1-202ENST00000350896 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.3□□□□□ -1.08
MSR1-202ENST00000350896 CDC25BP30305 580 aa8.29□□□□□ -1.08
MSR1-202ENST00000350896 SWT1Q5T5J6 900 aaKnown RBP8.29□□□□□ -1.08
MSR1-202ENST00000350896 ICE2Q659A1 982 aa8.29□□□□□ -1.08
MSR1-202ENST00000350896 ARHGAP45Q92619 1136 aa8.29□□□□□ -1.08
MSR1-202ENST00000350896 INO80Q9ULG1 1556 aaPredicted RBP8.29□□□□□ -1.08
MSR1-202ENST00000350896 ABCA9Q8IUA7 1624 aa8.29□□□□□ -1.08
MSR1-202ENST00000350896 TPM1P09493 284 aa8.29□□□□□ -1.08
MSR1-202ENST00000350896 SYCE3A1L190 88 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 GUCY2CP25092 1073 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 TRDNQ13061 729 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
MSR1-202ENST00000350896 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
MSR1-202ENST00000350896 ANAPC15P60006 121 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 CYB5RLQ6IPT4 315 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 UTP14AQ9BVJ6 771 aaKnown RBP8.28□□□□□ -1.08
MSR1-202ENST00000350896 SSH2Q76I76 1423 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 CCDC112Q8NEF3 446 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.28□□□□□ -1.08
MSR1-202ENST00000350896 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
MSR1-202ENST00000350896 VGLL3A8MV65 326 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms