RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 SKAP1Q86WV1 359 aa23.66■■□□□ 1.38
RNF38-202ENST00000350199 DDX54Q8TDD1 881 aaKnown RBP23.66■■□□□ 1.38
RNF38-202ENST00000350199 LRRFIP1Q32MZ4 808 aaKnown RBP23.66■■□□□ 1.38
RNF38-202ENST00000350199 TOMM22Q9NS69 142 aa23.65■■□□□ 1.38
RNF38-202ENST00000350199 TRIM27P14373 513 aa23.65■■□□□ 1.38
RNF38-202ENST00000350199 ZRANB1Q9UGI0 708 aa23.64■■□□□ 1.38
RNF38-202ENST00000350199 IL16Q14005 1332 aa23.64■■□□□ 1.38
RNF38-202ENST00000350199 POLKQ9UBT6 870 aa23.64■■□□□ 1.38
RNF38-202ENST00000350199 TMX4Q9H1E5 349 aaPredicted RBP23.64■■□□□ 1.37
RNF38-202ENST00000350199 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
RNF38-202ENST00000350199 TAF7Q15545 349 aaPredicted RBP23.63■■□□□ 1.37
RNF38-202ENST00000350199 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
RNF38-202ENST00000350199 NEUROD6Q96NK8 337 aa23.63■■□□□ 1.37
RNF38-202ENST00000350199 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
RNF38-202ENST00000350199 TTC21AQ8NDW8 1320 aa23.62■■□□□ 1.37
RNF38-202ENST00000350199 CSPP1Q1MSJ5 1256 aa23.62■■□□□ 1.37
RNF38-202ENST00000350199 RBM42Q9BTD8 480 aaKnown RBP23.62■■□□□ 1.37
RNF38-202ENST00000350199 ISY1Q9ULR0 285 aaKnown RBP23.62■■□□□ 1.37
RNF38-202ENST00000350199 YEATS2Q9ULM3 1422 aa23.62■■□□□ 1.37
RNF38-202ENST00000350199 MYL6BP14649 208 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 LRRCC1Q9C099 1032 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 MBIPQ9NS73 344 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 NPC1L1Q9UHC9 1359 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 CNTROBQ8N137 903 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 KIF3AQ9Y496 699 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 PLEKHH1Q9ULM0 1364 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 CFAP74Q9C0B2 1584 aa23.61■■□□□ 1.37
RNF38-202ENST00000350199 GOLGA6L6A8MZA4 724 aa23.6■■□□□ 1.37
RNF38-202ENST00000350199 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
RNF38-202ENST00000350199 RNF20Q5VTR2 975 aa23.6■■□□□ 1.37
RNF38-202ENST00000350199 DDX49Q9Y6V7 483 aaKnown RBP23.6■■□□□ 1.37
RNF38-202ENST00000350199 FOXD4L6Q3SYB3 417 aaPredicted RBP23.6■■□□□ 1.37
RNF38-202ENST00000350199 FOXD4L3Q6VB84 417 aaPredicted RBP23.6■■□□□ 1.37
RNF38-202ENST00000350199 AMOTQ4VCS5 1084 aa23.59■■□□□ 1.37
RNF38-202ENST00000350199 CFAP65Q6ZU64 1925 aaKnown RBP23.59■■□□□ 1.37
RNF38-202ENST00000350199 KRT28Q7Z3Y7 464 aa23.59■■□□□ 1.37
RNF38-202ENST00000350199 MEX3CQ5U5Q3 659 aaKnown RBP23.58■■□□□ 1.37
RNF38-202ENST00000350199 NCKAP5LQ9HCH0 1330 aa23.58■■□□□ 1.37
RNF38-202ENST00000350199 GSE1Q14687 1217 aa23.58■■□□□ 1.37
RNF38-202ENST00000350199 CDC42BPAQ5VT25 1732 aa23.58■■□□□ 1.37
RNF38-202ENST00000350199 MSNP26038 577 aaKnown RBP23.57■■□□□ 1.36
RNF38-202ENST00000350199 ADCY10Q96PN6 1610 aa23.57■■□□□ 1.36
RNF38-202ENST00000350199 ERC1Q8IUD2 1116 aa23.57■■□□□ 1.36
RNF38-202ENST00000350199 ZFYVE16Q7Z3T8 1539 aa23.56■■□□□ 1.36
RNF38-202ENST00000350199 KDM5DQ9BY66 1539 aa23.56■■□□□ 1.36
RNF38-202ENST00000350199 SRGAP3O43295 1099 aa23.56■■□□□ 1.36
RNF38-202ENST00000350199 NAP1L5Q96NT1 182 aaPredicted RBP23.56■■□□□ 1.36
RNF38-202ENST00000350199 MPRIPQ6WCQ1 1025 aa23.56■■□□□ 1.36
RNF38-202ENST00000350199 ATP6V1DQ9Y5K8 247 aa23.55■■□□□ 1.36
RNF38-202ENST00000350199 FAM184AQ8NB25 1140 aa23.55■■□□□ 1.36
RNF38-202ENST00000350199 SKOR2Q2VWA4 1001 aaPredicted RBP23.55■■□□□ 1.36
RNF38-202ENST00000350199 DRC7Q8IY82 874 aa23.55■■□□□ 1.36
RNF38-202ENST00000350199 H3BQV1 296 aa23.54■■□□□ 1.36
RNF38-202ENST00000350199 IFFO2Q5TF58 517 aa23.54■■□□□ 1.36
RNF38-202ENST00000350199 KIF6Q6ZMV9 814 aa23.54■■□□□ 1.36
RNF38-202ENST00000350199 FSD1Q9BTV5 496 aa23.54■■□□□ 1.36
RNF38-202ENST00000350199 NFKBIBQ15653 356 aa23.54■■□□□ 1.36
RNF38-202ENST00000350199 EIF4A2Q14240 407 aaKnown RBP23.54■■□□□ 1.36
RNF38-202ENST00000350199 AEBP1Q8IUX7 1158 aa23.53■■□□□ 1.36
RNF38-202ENST00000350199 F6X3S4 739 aa23.53■■□□□ 1.36
RNF38-202ENST00000350199 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
RNF38-202ENST00000350199 MLH3Q9UHC1 1453 aa23.53■■□□□ 1.36
RNF38-202ENST00000350199 NRDCO43847 1150 aa23.52■■□□□ 1.36
RNF38-202ENST00000350199 TRPM2O94759 1503 aa23.52■■□□□ 1.36
RNF38-202ENST00000350199 G3V3G9 751 aa23.52■■□□□ 1.36
RNF38-202ENST00000350199 APPP05067 770 aa23.52■■□□□ 1.36
RNF38-202ENST00000350199 DCAF8Q5TAQ9 597 aa23.52■■□□□ 1.36
RNF38-202ENST00000350199 SIL1Q9H173 461 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 PTPRTO14522 1441 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 ZFYVE9O95405 1425 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 KCNA6P17658 529 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 NUCB2P80303 420 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 EXOC6BQ9Y2D4 811 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 CHMP4CQ96CF2 233 aa23.51■■□□□ 1.35
RNF38-202ENST00000350199 CDK11BP21127 795 aaKnown RBP23.5■■□□□ 1.35
RNF38-202ENST00000350199 NUTM2BA6NNL0 878 aaPredicted RBP23.49■■□□□ 1.35
RNF38-202ENST00000350199 NUTM2EB1AL46 878 aaPredicted RBP23.49■■□□□ 1.35
RNF38-202ENST00000350199 NUTM2AQ8IVF1 878 aaPredicted RBP23.49■■□□□ 1.35
RNF38-202ENST00000350199 KDM5CP41229 1560 aa23.49■■□□□ 1.35
RNF38-202ENST00000350199 IL1RAPL2Q9NP60 686 aa23.49■■□□□ 1.35
RNF38-202ENST00000350199 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
RNF38-202ENST00000350199 PHF14O94880 888 aa23.49■■□□□ 1.35
RNF38-202ENST00000350199 IGHDP01880 384 aa23.49■■□□□ 1.35
RNF38-202ENST00000350199 RABEP1Q15276 862 aa23.49■■□□□ 1.35
RNF38-202ENST00000350199 CADPS2Q86UW7 1296 aa23.48■■□□□ 1.35
RNF38-202ENST00000350199 VPS37DQ86XT2 251 aa23.48■■□□□ 1.35
RNF38-202ENST00000350199 PTPRCP08575 1304 aa23.48■■□□□ 1.35
RNF38-202ENST00000350199 PLA2R1Q13018 1463 aa23.48■■□□□ 1.35
RNF38-202ENST00000350199 NEK4P51957 841 aa23.48■■□□□ 1.35
RNF38-202ENST00000350199 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
RNF38-202ENST00000350199 DNAJC2Q99543 621 aaKnown RBP23.47■■□□□ 1.35
RNF38-202ENST00000350199 MSH5O43196 834 aa23.47■■□□□ 1.35
RNF38-202ENST00000350199 FLIIQ13045 1269 aa23.47■■□□□ 1.35
RNF38-202ENST00000350199 ANKRD24Q8TF21 1146 aa23.47■■□□□ 1.35
RNF38-202ENST00000350199 SMC3Q9UQE7 1217 aa23.47■■□□□ 1.35
RNF38-202ENST00000350199 WASHC4Q2M389 1173 aa23.47■■□□□ 1.35
RNF38-202ENST00000350199 PHACTR3Q96KR7 559 aa23.46■■□□□ 1.35
RNF38-202ENST00000350199 SF3A1Q15459 793 aaKnown RBP23.46■■□□□ 1.35
RNF38-202ENST00000350199 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
RNF38-202ENST00000350199 FLT4P35916 1363 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms