RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
EPB41-203ENST00000349460 B4GALNT3Q6L9W6 998 aa13.93□□□□□ -0.18
EPB41-203ENST00000349460 ALS2Q96Q42 1657 aa13.92□□□□□ -0.18
EPB41-203ENST00000349460 FANCIQ9NVI1 1328 aa13.92□□□□□ -0.18
EPB41-203ENST00000349460 LTN1O94822 1766 aa13.92□□□□□ -0.18
EPB41-203ENST00000349460 RIPK4P57078 832 aa13.92□□□□□ -0.18
EPB41-203ENST00000349460 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
EPB41-203ENST00000349460 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
EPB41-203ENST00000349460 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
EPB41-203ENST00000349460 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
EPB41-203ENST00000349460 CENPQQ7L2Z9 268 aaPredicted RBP13.91□□□□□ -0.18
EPB41-203ENST00000349460 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
EPB41-203ENST00000349460 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
EPB41-203ENST00000349460 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
EPB41-203ENST00000349460 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
EPB41-203ENST00000349460 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
EPB41-203ENST00000349460 GNAI1P63096 354 aa13.9□□□□□ -0.18
EPB41-203ENST00000349460 STRCP1A6NGW2 1772 aa13.9□□□□□ -0.18
EPB41-203ENST00000349460 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
EPB41-203ENST00000349460 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
EPB41-203ENST00000349460 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
EPB41-203ENST00000349460 MED1Q15648 1581 aaPredicted RBP13.89□□□□□ -0.19
EPB41-203ENST00000349460 BABAM1Q9NWV8 329 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 KCNH5Q8NCM2 988 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 C1orf167Q5SNV9 1468 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 USP19O94966 1318 aa13.88□□□□□ -0.19
EPB41-203ENST00000349460 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
EPB41-203ENST00000349460 KIF16BQ96L93 1317 aa13.87□□□□□ -0.19
EPB41-203ENST00000349460 LMO7Q8WWI1 1683 aa13.87□□□□□ -0.19
EPB41-203ENST00000349460 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
EPB41-203ENST00000349460 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
EPB41-203ENST00000349460 C19orf44Q9H6X5 657 aa13.86□□□□□ -0.19
EPB41-203ENST00000349460 OVOS2A0A0G2JMS6 1433 aa13.86□□□□□ -0.19
EPB41-203ENST00000349460 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
EPB41-203ENST00000349460 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
EPB41-203ENST00000349460 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
EPB41-203ENST00000349460 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
EPB41-203ENST00000349460 BCAR3O75815 825 aa13.85□□□□□ -0.19
EPB41-203ENST00000349460 PLIN1O60240 522 aa13.84□□□□□ -0.19
EPB41-203ENST00000349460 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
EPB41-203ENST00000349460 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
EPB41-203ENST00000349460 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
EPB41-203ENST00000349460 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
EPB41-203ENST00000349460 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
EPB41-203ENST00000349460 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.19
EPB41-203ENST00000349460 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.19
EPB41-203ENST00000349460 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.19
EPB41-203ENST00000349460 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.2
EPB41-203ENST00000349460 CACNA1FO60840 1977 aa13.83□□□□□ -0.2
EPB41-203ENST00000349460 CRB1P82279 1406 aa13.83□□□□□ -0.2
EPB41-203ENST00000349460 HOXC9P31274 260 aa13.82□□□□□ -0.2
EPB41-203ENST00000349460 NEUROD2Q15784 382 aa13.82□□□□□ -0.2
EPB41-203ENST00000349460 GAS2L2Q8NHY3 880 aa13.82□□□□□ -0.2
EPB41-203ENST00000349460 IP6K1Q92551 441 aa13.82□□□□□ -0.2
EPB41-203ENST00000349460 N4BP2Q86UW6 1770 aaPredicted RBP13.82□□□□□ -0.2
EPB41-203ENST00000349460 NLRP6P59044 892 aa13.82□□□□□ -0.2
EPB41-203ENST00000349460 EXOSC9Q06265 439 aaKnown RBP13.82□□□□□ -0.2
EPB41-203ENST00000349460 CLUAP1Q96AJ1 413 aa13.82□□□□□ -0.2
EPB41-203ENST00000349460 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
EPB41-203ENST00000349460 CHL1O00533 1208 aa13.8□□□□□ -0.2
EPB41-203ENST00000349460 PPM1GO15355 546 aaPredicted RBP13.8□□□□□ -0.2
EPB41-203ENST00000349460 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
EPB41-203ENST00000349460 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
EPB41-203ENST00000349460 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
EPB41-203ENST00000349460 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
EPB41-203ENST00000349460 ATF7IPQ6VMQ6 1270 aa13.79□□□□□ -0.2
EPB41-203ENST00000349460 COL18A1P39060 1754 aa13.79□□□□□ -0.2
EPB41-203ENST00000349460 VAMP4O75379 141 aa13.79□□□□□ -0.2
EPB41-203ENST00000349460 HMOX1P09601 288 aa13.79□□□□□ -0.2
EPB41-203ENST00000349460 FBLN1P23142 703 aa13.79□□□□□ -0.2
EPB41-203ENST00000349460 AMPHP49418 695 aa13.79□□□□□ -0.2
EPB41-203ENST00000349460 PSME1Q06323 249 aa13.78□□□□□ -0.2
EPB41-203ENST00000349460 PROSER2Q86WR7 435 aaPredicted RBP13.78□□□□□ -0.2
EPB41-203ENST00000349460 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
EPB41-203ENST00000349460 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
EPB41-203ENST00000349460 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
EPB41-203ENST00000349460 PXDNQ92626 1479 aa13.77□□□□□ -0.2
EPB41-203ENST00000349460 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
EPB41-203ENST00000349460 EYA1Q99502 592 aa13.77□□□□□ -0.21
EPB41-203ENST00000349460 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
EPB41-203ENST00000349460 TSR2Q969E8 191 aaKnown RBP13.77□□□□□ -0.21
EPB41-203ENST00000349460 MBIPQ9NS73 344 aa13.77□□□□□ -0.21
EPB41-203ENST00000349460 TMEM94Q12767 1356 aa13.77□□□□□ -0.21
EPB41-203ENST00000349460 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
EPB41-203ENST00000349460 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
EPB41-203ENST00000349460 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
EPB41-203ENST00000349460 MRPL50Q8N5N7 158 aaKnown RBP13.76□□□□□ -0.21
EPB41-203ENST00000349460 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
EPB41-203ENST00000349460 ESCO1Q5FWF5 840 aa13.75□□□□□ -0.21
EPB41-203ENST00000349460 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
EPB41-203ENST00000349460 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
EPB41-203ENST00000349460 CEMIPQ8WUJ3 1361 aa13.75□□□□□ -0.21
EPB41-203ENST00000349460 ABCC4O15439 1325 aa13.75□□□□□ -0.21
EPB41-203ENST00000349460 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
EPB41-203ENST00000349460 CPDO75976 1380 aa13.74□□□□□ -0.21
EPB41-203ENST00000349460 MSH6P52701 1360 aa13.74□□□□□ -0.21
EPB41-203ENST00000349460 SIPA1L3O60292 1781 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms