RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.73
TNFSF13-202ENST00000349228 PODXL2Q9NZ53 605 aa19.58■□□□□ 0.73
TNFSF13-202ENST00000349228 TNRQ92752 1358 aa19.58■□□□□ 0.72
TNFSF13-202ENST00000349228 UBE2Q2Q8WVN8 375 aa19.58■□□□□ 0.72
TNFSF13-202ENST00000349228 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
TNFSF13-202ENST00000349228 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
TNFSF13-202ENST00000349228 NME9Q86XW9 330 aa19.56■□□□□ 0.72
TNFSF13-202ENST00000349228 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
TNFSF13-202ENST00000349228 TMEM2Q9UHN6 1383 aa19.55■□□□□ 0.72
TNFSF13-202ENST00000349228 VAMP4O75379 141 aa19.54■□□□□ 0.72
TNFSF13-202ENST00000349228 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
TNFSF13-202ENST00000349228 PIK3R4Q99570 1358 aa19.54■□□□□ 0.72
TNFSF13-202ENST00000349228 MAP2P11137 1827 aaKnown RBP19.54■□□□□ 0.72
TNFSF13-202ENST00000349228 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
TNFSF13-202ENST00000349228 GSE1Q14687 1217 aa19.53■□□□□ 0.72
TNFSF13-202ENST00000349228 HMOX1P09601 288 aa19.52■□□□□ 0.72
TNFSF13-202ENST00000349228 MRPL50Q8N5N7 158 aaKnown RBP19.52■□□□□ 0.72
TNFSF13-202ENST00000349228 CFAP44Q96MT7 982 aa19.52■□□□□ 0.72
TNFSF13-202ENST00000349228 PTCH1Q13635 1447 aa19.52■□□□□ 0.72
TNFSF13-202ENST00000349228 HAP1P54257 671 aaPredicted RBP19.52■□□□□ 0.72
TNFSF13-202ENST00000349228 NUCB1Q02818 461 aa19.51■□□□□ 0.71
TNFSF13-202ENST00000349228 FBLN1P23142 703 aa19.5■□□□□ 0.71
TNFSF13-202ENST00000349228 GCC1Q96CN9 775 aa19.5■□□□□ 0.71
TNFSF13-202ENST00000349228 AKAP12Q02952 1782 aa19.5■□□□□ 0.71
TNFSF13-202ENST00000349228 KIF24Q5T7B8 1368 aa19.49■□□□□ 0.71
TNFSF13-202ENST00000349228 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
TNFSF13-202ENST00000349228 C3P01024 1663 aa19.49■□□□□ 0.71
TNFSF13-202ENST00000349228 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
TNFSF13-202ENST00000349228 API5Q9BZZ5 524 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-202ENST00000349228 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
TNFSF13-202ENST00000349228 HOMEZQ8IX15 550 aa19.48■□□□□ 0.71
TNFSF13-202ENST00000349228 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
TNFSF13-202ENST00000349228 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
TNFSF13-202ENST00000349228 ADAMTS13Q76LX8 1427 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 TWISTNBQ3B726 338 aaPredicted RBP19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 CHD1LQ86WJ1 897 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 C22orf23Q9BZE7 217 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 ZRANB1Q9UGI0 708 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 ABCC4O15439 1325 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 PRR36Q9H6K5 1346 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 UBR1Q8IWV7 1749 aa19.46■□□□□ 0.71
TNFSF13-202ENST00000349228 TTC21BQ7Z4L5 1316 aa19.45■□□□□ 0.7
TNFSF13-202ENST00000349228 ROBO2Q9HCK4 1378 aa19.45■□□□□ 0.7
TNFSF13-202ENST00000349228 NRKQ7Z2Y5 1582 aa19.45■□□□□ 0.7
TNFSF13-202ENST00000349228 FRAT2O75474 233 aaPredicted RBP19.44■□□□□ 0.7
TNFSF13-202ENST00000349228 RRS1Q15050 365 aaKnown RBP19.44■□□□□ 0.7
TNFSF13-202ENST00000349228 TBC1D2Q9BYX2 928 aa19.44■□□□□ 0.7
TNFSF13-202ENST00000349228 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
TNFSF13-202ENST00000349228 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
TNFSF13-202ENST00000349228 ANTXR1Q9H6X2 564 aa19.43■□□□□ 0.7
TNFSF13-202ENST00000349228 KIF13AQ9H1H9 1805 aa19.43■□□□□ 0.7
TNFSF13-202ENST00000349228 BMP2KLQ5H9B9 411 aa19.42■□□□□ 0.7
TNFSF13-202ENST00000349228 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
TNFSF13-202ENST00000349228 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
TNFSF13-202ENST00000349228 ACEP12821 1306 aa19.41■□□□□ 0.7
TNFSF13-202ENST00000349228 NCKAP5LQ9HCH0 1330 aa19.41■□□□□ 0.7
TNFSF13-202ENST00000349228 USP31Q70CQ4 1352 aa19.41■□□□□ 0.7
TNFSF13-202ENST00000349228 EIF4A2Q14240 407 aaKnown RBP19.41■□□□□ 0.7
TNFSF13-202ENST00000349228 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
TNFSF13-202ENST00000349228 EID1Q9Y6B2 187 aa19.4■□□□□ 0.7
TNFSF13-202ENST00000349228 USP6P35125 1406 aa19.4■□□□□ 0.7
TNFSF13-202ENST00000349228 KIAA0232Q92628 1395 aa19.4■□□□□ 0.7
TNFSF13-202ENST00000349228 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
TNFSF13-202ENST00000349228 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.69
TNFSF13-202ENST00000349228 TOPAZ1Q8N9V7 1692 aa19.39■□□□□ 0.69
TNFSF13-202ENST00000349228 RBM25P49756 843 aaKnown RBP19.39■□□□□ 0.69
TNFSF13-202ENST00000349228 LNPKQ9C0E8 428 aa19.38■□□□□ 0.69
TNFSF13-202ENST00000349228 TULP1O00294 542 aaPredicted RBP19.37■□□□□ 0.69
TNFSF13-202ENST00000349228 CHL1O00533 1208 aa19.37■□□□□ 0.69
TNFSF13-202ENST00000349228 SULT6B1Q6IMI4 303 aa19.37■□□□□ 0.69
TNFSF13-202ENST00000349228 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
TNFSF13-202ENST00000349228 INTS3Q68E01 1043 aaKnown RBP19.37■□□□□ 0.69
TNFSF13-202ENST00000349228 TBX22Q9Y458 520 aa19.37■□□□□ 0.69
TNFSF13-202ENST00000349228 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.36■□□□□ 0.69
TNFSF13-202ENST00000349228 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
TNFSF13-202ENST00000349228 LTKP29376 864 aa19.36■□□□□ 0.69
TNFSF13-202ENST00000349228 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
TNFSF13-202ENST00000349228 SLKQ9H2G2 1235 aaPredicted RBP19.35■□□□□ 0.69
TNFSF13-202ENST00000349228 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
TNFSF13-202ENST00000349228 SNX21Q969T3 373 aa19.35■□□□□ 0.69
TNFSF13-202ENST00000349228 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 PTPRCP08575 1304 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 HSCBQ8IWL3 235 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 CHMP5Q9NZZ3 219 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 SLIT1O75093 1534 aa19.34■□□□□ 0.69
TNFSF13-202ENST00000349228 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
TNFSF13-202ENST00000349228 SIRT2Q8IXJ6 389 aa19.32■□□□□ 0.68
TNFSF13-202ENST00000349228 RPAP2Q8IXW5 612 aaPredicted RBP19.32■□□□□ 0.68
TNFSF13-202ENST00000349228 DCTN1Q14203 1278 aa19.31■□□□□ 0.68
TNFSF13-202ENST00000349228 AEBP1Q8IUX7 1158 aa19.31■□□□□ 0.68
TNFSF13-202ENST00000349228 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
TNFSF13-202ENST00000349228 DCTPP1Q9H773 170 aa19.3■□□□□ 0.68
TNFSF13-202ENST00000349228 AMOTL2Q9Y2J4 779 aa19.3■□□□□ 0.68
TNFSF13-202ENST00000349228 RGPD1P0DJD0 1748 aa19.3■□□□□ 0.68
TNFSF13-202ENST00000349228 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
TNFSF13-202ENST00000349228 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
TNFSF13-202ENST00000349228 HSP90AB2PQ58FF8 381 aa19.29■□□□□ 0.68
TNFSF13-202ENST00000349228 ANKRD44Q8N8A2 993 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms