RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
RLIM-202ENST00000349225 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
RLIM-202ENST00000349225 STAC3Q96MF2 364 aa17.51■□□□□ 0.39
RLIM-202ENST00000349225 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
RLIM-202ENST00000349225 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
RLIM-202ENST00000349225 BBXQ8WY36 941 aaPredicted RBP17.5■□□□□ 0.39
RLIM-202ENST00000349225 IGSF3O75054 1194 aa17.5■□□□□ 0.39
RLIM-202ENST00000349225 GCC1Q96CN9 775 aa17.49■□□□□ 0.39
RLIM-202ENST00000349225 ABCA9Q8IUA7 1624 aa17.49■□□□□ 0.39
RLIM-202ENST00000349225 PIBF1Q8WXW3 757 aa17.49■□□□□ 0.39
RLIM-202ENST00000349225 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
RLIM-202ENST00000349225 DNTTIP2Q5QJE6 756 aaKnown RBP17.49■□□□□ 0.39
RLIM-202ENST00000349225 USP32Q8NFA0 1604 aa17.49■□□□□ 0.39
RLIM-202ENST00000349225 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
RLIM-202ENST00000349225 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
RLIM-202ENST00000349225 PLEKHM2Q8IWE5 1019 aa17.48■□□□□ 0.39
RLIM-202ENST00000349225 TTC12Q9H892 705 aaPredicted RBP17.48■□□□□ 0.39
RLIM-202ENST00000349225 KIF20AO95235 890 aa17.48■□□□□ 0.39
RLIM-202ENST00000349225 PRIMPOLQ96LW4 560 aa17.48■□□□□ 0.39
RLIM-202ENST00000349225 SBNO2Q9Y2G9 1366 aa17.47■□□□□ 0.39
RLIM-202ENST00000349225 INO80Q9ULG1 1556 aaPredicted RBP17.47■□□□□ 0.39
RLIM-202ENST00000349225 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
RLIM-202ENST00000349225 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
RLIM-202ENST00000349225 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
RLIM-202ENST00000349225 KNDC1Q76NI1 1749 aa17.47■□□□□ 0.39
RLIM-202ENST00000349225 ZC3H13Q5T200 1668 aaKnown RBP17.47■□□□□ 0.39
RLIM-202ENST00000349225 FBLN2P98095 1184 aa17.47■□□□□ 0.39
RLIM-202ENST00000349225 CWC22Q9HCG8 908 aaKnown RBP17.46■□□□□ 0.39
RLIM-202ENST00000349225 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
RLIM-202ENST00000349225 OTUD7AQ8TE49 926 aaPredicted RBP17.45■□□□□ 0.38
RLIM-202ENST00000349225 TMEM51Q9NW97 253 aa17.45■□□□□ 0.38
RLIM-202ENST00000349225 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
RLIM-202ENST00000349225 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
RLIM-202ENST00000349225 TSPY26PQ9H489 355 aa17.45■□□□□ 0.38
RLIM-202ENST00000349225 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
RLIM-202ENST00000349225 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
RLIM-202ENST00000349225 KIF3AQ9Y496 699 aa17.44■□□□□ 0.38
RLIM-202ENST00000349225 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
RLIM-202ENST00000349225 IFT172Q9UG01 1749 aa17.43■□□□□ 0.38
RLIM-202ENST00000349225 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
RLIM-202ENST00000349225 SPTLC3Q9NUV7 552 aa17.43■□□□□ 0.38
RLIM-202ENST00000349225 USP25Q9UHP3 1055 aa17.43■□□□□ 0.38
RLIM-202ENST00000349225 MYOM2P54296 1465 aa17.43■□□□□ 0.38
RLIM-202ENST00000349225 GADD45BO75293 160 aaPredicted RBP17.43■□□□□ 0.38
RLIM-202ENST00000349225 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
RLIM-202ENST00000349225 REREQ9P2R6 1566 aa17.43■□□□□ 0.38
RLIM-202ENST00000349225 TTC22Q5TAA0 569 aa17.42■□□□□ 0.38
RLIM-202ENST00000349225 ZBTB22O15209 634 aa17.42■□□□□ 0.38
RLIM-202ENST00000349225 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
RLIM-202ENST00000349225 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
RLIM-202ENST00000349225 IL16Q14005 1332 aa17.42■□□□□ 0.38
RLIM-202ENST00000349225 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
RLIM-202ENST00000349225 MROH2AA6NES4 1674 aa17.41■□□□□ 0.38
RLIM-202ENST00000349225 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
RLIM-202ENST00000349225 GDPD2Q9HCC8 539 aa17.41■□□□□ 0.38
RLIM-202ENST00000349225 PDE4CQ08493 712 aa17.41■□□□□ 0.38
RLIM-202ENST00000349225 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
RLIM-202ENST00000349225 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
RLIM-202ENST00000349225 TCHHQ07283 1943 aa17.4■□□□□ 0.38
RLIM-202ENST00000349225 TSPYL6Q8N831 410 aa17.4■□□□□ 0.38
RLIM-202ENST00000349225 BRD1O95696 1058 aa17.4■□□□□ 0.38
RLIM-202ENST00000349225 MBD3O95983 291 aa17.4■□□□□ 0.38
RLIM-202ENST00000349225 ANKRD7Q92527 254 aa17.4■□□□□ 0.38
RLIM-202ENST00000349225 PDCL2Q8N4E4 241 aa17.39■□□□□ 0.37
RLIM-202ENST00000349225 MRPL50Q8N5N7 158 aaKnown RBP17.39■□□□□ 0.37
RLIM-202ENST00000349225 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
RLIM-202ENST00000349225 SDSP20132 328 aa17.39■□□□□ 0.37
RLIM-202ENST00000349225 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
RLIM-202ENST00000349225 FOXD4L6Q3SYB3 417 aaPredicted RBP17.39■□□□□ 0.37
RLIM-202ENST00000349225 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.37
RLIM-202ENST00000349225 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
RLIM-202ENST00000349225 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
RLIM-202ENST00000349225 ADCY5O95622 1261 aa17.38■□□□□ 0.37
RLIM-202ENST00000349225 TET3O43151 1660 aa17.38■□□□□ 0.37
RLIM-202ENST00000349225 AP5Z1O43299 807 aa17.38■□□□□ 0.37
RLIM-202ENST00000349225 ST18O60284 1047 aa17.38■□□□□ 0.37
RLIM-202ENST00000349225 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
RLIM-202ENST00000349225 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
RLIM-202ENST00000349225 ABCC1P33527 1531 aa17.37■□□□□ 0.37
RLIM-202ENST00000349225 ABCC4O15439 1325 aa17.37■□□□□ 0.37
RLIM-202ENST00000349225 PYCARDQ9ULZ3 195 aa17.37■□□□□ 0.37
RLIM-202ENST00000349225 DEPDC5O75140 1603 aa17.37■□□□□ 0.37
RLIM-202ENST00000349225 VAMP4O75379 141 aa17.37■□□□□ 0.37
RLIM-202ENST00000349225 NEURL4Q96JN8 1562 aa17.36■□□□□ 0.37
RLIM-202ENST00000349225 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
RLIM-202ENST00000349225 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
RLIM-202ENST00000349225 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
RLIM-202ENST00000349225 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
RLIM-202ENST00000349225 CTIFO43310 598 aaKnown RBP17.34■□□□□ 0.37
RLIM-202ENST00000349225 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
RLIM-202ENST00000349225 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
RLIM-202ENST00000349225 KIAA1524Q8TCG1 905 aa17.34■□□□□ 0.37
RLIM-202ENST00000349225 VGLL3A8MV65 326 aa17.33■□□□□ 0.37
RLIM-202ENST00000349225 CGNQ9P2M7 1197 aaKnown RBP17.33■□□□□ 0.37
RLIM-202ENST00000349225 ADGRB1O14514 1584 aa17.33■□□□□ 0.36
RLIM-202ENST00000349225 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
RLIM-202ENST00000349225 CHMP4BQ9H444 224 aaKnown RBP17.33■□□□□ 0.36
RLIM-202ENST00000349225 ANKRD36BQ8N2N9 1353 aa17.32■□□□□ 0.36
RLIM-202ENST00000349225 KIF1BO60333 1816 aa17.32■□□□□ 0.36
RLIM-202ENST00000349225 TULP4Q9NRJ4 1543 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms