RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 CCDC57Q2TAC2 916 aa14.55□□□□□ -0.08
TRIOBP-202ENST00000344404 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
TRIOBP-202ENST00000344404 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 ERLIN2O94905 339 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 FILIP1LQ4L180 1135 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 SMARCE1Q969G3 411 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 C8orf37Q96NL8 207 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 USP47Q96K76 1375 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 UBAP1LF5GYI3 381 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 ACSBG1Q96GR2 724 aa14.54□□□□□ -0.08
TRIOBP-202ENST00000344404 CCDC181Q5TID7 509 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 GNAI1P63096 354 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 CCDC30Q5VVM6 783 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 CT47B1P0C2W7 299 aaPredicted RBP14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 PSMA5P28066 241 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 TRIM5Q9C035 493 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 PHLDB1Q86UU1 1377 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 MIA2Q96PC5 1412 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 GBP2P32456 591 aaPredicted RBP14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
TRIOBP-202ENST00000344404 CFAP70Q5T0N1 1121 aa14.52□□□□□ -0.08
TRIOBP-202ENST00000344404 TSHZ2Q9NRE2 1034 aa14.52□□□□□ -0.08
TRIOBP-202ENST00000344404 LRP2BPQ9P2M1 347 aa14.52□□□□□ -0.08
TRIOBP-202ENST00000344404 CRACR2BQ8N4Y2 399 aaPredicted RBP14.52□□□□□ -0.09
TRIOBP-202ENST00000344404 TDO2P48775 406 aa14.52□□□□□ -0.09
TRIOBP-202ENST00000344404 CABP1Q9NZU7 370 aa14.52□□□□□ -0.09
TRIOBP-202ENST00000344404 DHX8Q14562 1220 aaKnown RBP14.51□□□□□ -0.09
TRIOBP-202ENST00000344404 RPGRQ92834 1020 aaKnown RBP14.51□□□□□ -0.09
TRIOBP-202ENST00000344404 ERC1Q8IUD2 1116 aa14.51□□□□□ -0.09
TRIOBP-202ENST00000344404 TMOD2Q9NZR1 351 aa14.51□□□□□ -0.09
TRIOBP-202ENST00000344404 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.51□□□□□ -0.09
TRIOBP-202ENST00000344404 PUS7Q96PZ0 661 aaKnown RBP14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 FIBPO43427 364 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 PRKAR2BP31323 418 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 TAF3Q5VWG9 929 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 WDHD1O75717 1129 aaPredicted RBP14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 GOLGA6L10A6NI86 522 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 SERPINC1P01008 464 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 GSE1Q14687 1217 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 STK38Q15208 465 aa14.5□□□□□ -0.09
TRIOBP-202ENST00000344404 HDGFL1Q5TGJ6 251 aa14.49□□□□□ -0.09
TRIOBP-202ENST00000344404 ANAPC15P60006 121 aa14.49□□□□□ -0.09
TRIOBP-202ENST00000344404 C22orf23Q9BZE7 217 aa14.49□□□□□ -0.09
TRIOBP-202ENST00000344404 TMOD3Q9NYL9 352 aa14.49□□□□□ -0.09
TRIOBP-202ENST00000344404 EZRP15311 586 aaKnown RBP14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 NFKBIBQ15653 356 aa14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 DESP17661 470 aa14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 CCDC112Q8NEF3 446 aa14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 ERCC4Q92889 916 aaPredicted RBP14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 ZNHIT6Q9NWK9 470 aaKnown RBP14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 CAVIN1Q6NZI2 390 aaKnown RBP14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 DRC1Q96MC2 740 aa14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 COMMD10Q9Y6G5 202 aa14.48□□□□□ -0.09
TRIOBP-202ENST00000344404 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 NEK4P51957 841 aa14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 RBM26Q5T8P6 1007 aaKnown RBP14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 C6orf229H3BNL8 230 aa14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 IDH1O75874 414 aaKnown RBP14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 UBA5Q9GZZ9 404 aa14.47□□□□□ -0.09
TRIOBP-202ENST00000344404 GPTP24298 496 aa14.46□□□□□ -0.09
TRIOBP-202ENST00000344404 IGHMBP2P38935 993 aaKnown RBP14.46□□□□□ -0.09
TRIOBP-202ENST00000344404 GAS2L2Q8NHY3 880 aa14.46□□□□□ -0.09
TRIOBP-202ENST00000344404 MINDY4BA8MYZ0 360 aa14.46□□□□□ -0.09
TRIOBP-202ENST00000344404 TSR2Q969E8 191 aaKnown RBP14.46□□□□□ -0.1
TRIOBP-202ENST00000344404 NACAP1Q9BZK3 213 aa14.46□□□□□ -0.1
TRIOBP-202ENST00000344404 FOXO3O43524 673 aa14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 ME1P48163 572 aa14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 WAPLQ7Z5K2 1190 aa14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 NF2P35240 595 aa14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 LRRFIP2Q9Y608 721 aaKnown RBP14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 PRPF40AO75400 957 aaKnown RBP14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 TRIM21P19474 475 aaKnown RBP14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
TRIOBP-202ENST00000344404 TNNT1P13805 278 aa14.44□□□□□ -0.1
TRIOBP-202ENST00000344404 SCAPERQ9BY12 1400 aa14.44□□□□□ -0.1
TRIOBP-202ENST00000344404 F8W031 263 aaPredicted RBP14.44□□□□□ -0.1
TRIOBP-202ENST00000344404 RSPH6AQ9H0K4 717 aa14.44□□□□□ -0.1
TRIOBP-202ENST00000344404 TRIM22Q8IYM9 498 aa14.44□□□□□ -0.1
TRIOBP-202ENST00000344404 GOLGA6L10A0A0M3HER8 536 aa14.44□□□□□ -0.1
TRIOBP-202ENST00000344404 CDC45O75419 566 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 STARD3NLO95772 234 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 CCDC113Q9H0I3 377 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 LEKR1Q6ZMV7 388 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 PRG4Q92954 1404 aaPredicted RBP14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 AACSQ86V21 672 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 PPFIBP1Q86W92 1011 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 UBAC1Q9BSL1 405 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 BCAR3O75815 825 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 NUCB2P80303 420 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 CCDC82Q8N4S0 544 aa14.43□□□□□ -0.1
TRIOBP-202ENST00000344404 STIM1Q13586 685 aa14.42□□□□□ -0.1
TRIOBP-202ENST00000344404 SLC12A5Q9H2X9 1139 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms