RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 PLEKHG3A1L390 1219 aa16.3■□□□□ 0.2
RNF13-201ENST00000344229 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
RNF13-201ENST00000344229 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
RNF13-201ENST00000344229 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
RNF13-201ENST00000344229 TRIM27P14373 513 aa16.28■□□□□ 0.2
RNF13-201ENST00000344229 USP6P35125 1406 aa16.28■□□□□ 0.2
RNF13-201ENST00000344229 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
RNF13-201ENST00000344229 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
RNF13-201ENST00000344229 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
RNF13-201ENST00000344229 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
RNF13-201ENST00000344229 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
RNF13-201ENST00000344229 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
RNF13-201ENST00000344229 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
RNF13-201ENST00000344229 SSH2Q76I76 1423 aa16.27■□□□□ 0.19
RNF13-201ENST00000344229 XRN1Q8IZH2 1706 aaKnown RBP16.26■□□□□ 0.19
RNF13-201ENST00000344229 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
RNF13-201ENST00000344229 AAMPQ13685 434 aa16.26■□□□□ 0.19
RNF13-201ENST00000344229 PTCH1Q13635 1447 aa16.26■□□□□ 0.19
RNF13-201ENST00000344229 NEFMP07197 916 aa16.25■□□□□ 0.19
RNF13-201ENST00000344229 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
RNF13-201ENST00000344229 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
RNF13-201ENST00000344229 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
RNF13-201ENST00000344229 ATF7IPQ6VMQ6 1270 aa16.25■□□□□ 0.19
RNF13-201ENST00000344229 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
RNF13-201ENST00000344229 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
RNF13-201ENST00000344229 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
RNF13-201ENST00000344229 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
RNF13-201ENST00000344229 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
RNF13-201ENST00000344229 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
RNF13-201ENST00000344229 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
RNF13-201ENST00000344229 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
RNF13-201ENST00000344229 PKNOX2Q96KN3 472 aa16.23■□□□□ 0.19
RNF13-201ENST00000344229 EIF5BO60841 1220 aaKnown RBP16.23■□□□□ 0.19
RNF13-201ENST00000344229 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
RNF13-201ENST00000344229 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
RNF13-201ENST00000344229 HSP90AB2PQ58FF8 381 aa16.22■□□□□ 0.19
RNF13-201ENST00000344229 TMEM57Q8N5G2 664 aa16.22■□□□□ 0.19
RNF13-201ENST00000344229 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
RNF13-201ENST00000344229 CEP170BQ9Y4F5 1589 aaPredicted RBP16.22■□□□□ 0.19
RNF13-201ENST00000344229 VAMP4O75379 141 aa16.21■□□□□ 0.19
RNF13-201ENST00000344229 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
RNF13-201ENST00000344229 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
RNF13-201ENST00000344229 PIK3C2AO00443 1686 aa16.21■□□□□ 0.19
RNF13-201ENST00000344229 ITPRIPQ8IWB1 547 aa16.21■□□□□ 0.19
RNF13-201ENST00000344229 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
RNF13-201ENST00000344229 SOX12O15370 315 aa16.2■□□□□ 0.18
RNF13-201ENST00000344229 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
RNF13-201ENST00000344229 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
RNF13-201ENST00000344229 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
RNF13-201ENST00000344229 KCNA6P17658 529 aa16.2■□□□□ 0.18
RNF13-201ENST00000344229 RWDD1Q9H446 243 aaPredicted RBP16.2■□□□□ 0.18
RNF13-201ENST00000344229 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
RNF13-201ENST00000344229 GNAI1P63096 354 aa16.19■□□□□ 0.18
RNF13-201ENST00000344229 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
RNF13-201ENST00000344229 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
RNF13-201ENST00000344229 SEC24BO95487 1268 aa16.17■□□□□ 0.18
RNF13-201ENST00000344229 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
RNF13-201ENST00000344229 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
RNF13-201ENST00000344229 MRPL50Q8N5N7 158 aaKnown RBP16.17■□□□□ 0.18
RNF13-201ENST00000344229 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
RNF13-201ENST00000344229 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
RNF13-201ENST00000344229 CHD2O14647 1828 aaKnown RBP16.17■□□□□ 0.18
RNF13-201ENST00000344229 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
RNF13-201ENST00000344229 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
RNF13-201ENST00000344229 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
RNF13-201ENST00000344229 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
RNF13-201ENST00000344229 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
RNF13-201ENST00000344229 IPO8O15397 1037 aaKnown RBP16.16■□□□□ 0.18
RNF13-201ENST00000344229 USP19O94966 1318 aa16.16■□□□□ 0.18
RNF13-201ENST00000344229 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
RNF13-201ENST00000344229 ZNF428Q96B54 188 aa16.15■□□□□ 0.18
RNF13-201ENST00000344229 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
RNF13-201ENST00000344229 TWISTNBQ3B726 338 aaPredicted RBP16.14■□□□□ 0.17
RNF13-201ENST00000344229 SLC4A3P48751 1232 aa16.14■□□□□ 0.17
RNF13-201ENST00000344229 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
RNF13-201ENST00000344229 MCM10Q7L590 875 aa16.13■□□□□ 0.17
RNF13-201ENST00000344229 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
RNF13-201ENST00000344229 ANKARQ7Z5J8 1434 aa16.12■□□□□ 0.17
RNF13-201ENST00000344229 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
RNF13-201ENST00000344229 PIK3R4Q99570 1358 aa16.12■□□□□ 0.17
RNF13-201ENST00000344229 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
RNF13-201ENST00000344229 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
RNF13-201ENST00000344229 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
RNF13-201ENST00000344229 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
RNF13-201ENST00000344229 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
RNF13-201ENST00000344229 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
RNF13-201ENST00000344229 FLT4P35916 1363 aa16.1■□□□□ 0.17
RNF13-201ENST00000344229 FOXO3O43524 673 aa16.1■□□□□ 0.17
RNF13-201ENST00000344229 ADAMTSL3P82987 1691 aa16.1■□□□□ 0.17
RNF13-201ENST00000344229 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
RNF13-201ENST00000344229 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
RNF13-201ENST00000344229 NLRP6P59044 892 aa16.09■□□□□ 0.17
RNF13-201ENST00000344229 CHL1O00533 1208 aa16.09■□□□□ 0.17
RNF13-201ENST00000344229 ABCC4O15439 1325 aa16.08■□□□□ 0.17
RNF13-201ENST00000344229 MTHFSDQ2M296 383 aaKnown RBP16.08■□□□□ 0.16
RNF13-201ENST00000344229 EYA1Q99502 592 aa16.08■□□□□ 0.16
RNF13-201ENST00000344229 CRB1P82279 1406 aa16.08■□□□□ 0.16
RNF13-201ENST00000344229 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
RNF13-201ENST00000344229 AMPHP49418 695 aa16.07■□□□□ 0.16
RNF13-201ENST00000344229 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms