RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 FAM182BQ5T319 152 aa23.79■■□□□ 1.4
CD55-202ENST00000343420 DEFB132Q7Z7B7 95 aa23.79■■□□□ 1.4
CD55-202ENST00000343420 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
CD55-202ENST00000343420 NME9Q86XW9 330 aa23.77■■□□□ 1.4
CD55-202ENST00000343420 ZRANB1Q9UGI0 708 aa23.77■■□□□ 1.4
CD55-202ENST00000343420 AXIN2Q9Y2T1 843 aa23.77■■□□□ 1.4
CD55-202ENST00000343420 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
CD55-202ENST00000343420 TMF1P82094 1093 aa23.75■■□□□ 1.39
CD55-202ENST00000343420 PDE3BQ13370 1112 aa23.75■■□□□ 1.39
CD55-202ENST00000343420 FAM196AQ6ZSG2 479 aa23.75■■□□□ 1.39
CD55-202ENST00000343420 TOM1L2Q6ZVM7 507 aa23.75■■□□□ 1.39
CD55-202ENST00000343420 ABCC6O95255 1503 aa23.74■■□□□ 1.39
CD55-202ENST00000343420 BAG6P46379 1132 aa23.74■■□□□ 1.39
CD55-202ENST00000343420 WDR17Q8IZU2 1322 aa23.74■■□□□ 1.39
CD55-202ENST00000343420 TNS1Q9HBL0 1735 aaKnown RBP23.72■■□□□ 1.39
CD55-202ENST00000343420 LTN1O94822 1766 aa23.72■■□□□ 1.39
CD55-202ENST00000343420 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.39
CD55-202ENST00000343420 OVOS2A0A0J9YW53 1432 aa23.69■■□□□ 1.38
CD55-202ENST00000343420 OVOS2Q6IE36 1432 aa23.69■■□□□ 1.38
CD55-202ENST00000343420 CSB-PGBD3P0DP91 1061 aa23.69■■□□□ 1.38
CD55-202ENST00000343420 ANKRD36BQ8N2N9 1353 aa23.68■■□□□ 1.38
CD55-202ENST00000343420 CDCA8Q53HL2 280 aa23.68■■□□□ 1.38
CD55-202ENST00000343420 DISP2A7MBM2 1401 aa23.67■■□□□ 1.38
CD55-202ENST00000343420 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
CD55-202ENST00000343420 CARD10Q9BWT7 1032 aa23.67■■□□□ 1.38
CD55-202ENST00000343420 LRRC37A3O60309 1634 aa23.66■■□□□ 1.38
CD55-202ENST00000343420 TRIM37O94972 964 aa23.66■■□□□ 1.38
CD55-202ENST00000343420 CDCA7Q9BWT1 371 aaPredicted RBP23.66■■□□□ 1.38
CD55-202ENST00000343420 EN1Q05925 392 aaPredicted RBP23.65■■□□□ 1.38
CD55-202ENST00000343420 C11orf95C9JLR9 678 aaPredicted RBP23.64■■□□□ 1.37
CD55-202ENST00000343420 DDB1Q16531 1140 aa23.64■■□□□ 1.37
CD55-202ENST00000343420 CCDC7Q96M83 1385 aa23.63■■□□□ 1.37
CD55-202ENST00000343420 COG3Q96JB2 828 aa23.62■■□□□ 1.37
CD55-202ENST00000343420 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
CD55-202ENST00000343420 ERBB3P21860 1342 aa23.61■■□□□ 1.37
CD55-202ENST00000343420 OVOS2A0A0G2JMS6 1433 aa23.6■■□□□ 1.37
CD55-202ENST00000343420 APBA3O96018 575 aa23.6■■□□□ 1.37
CD55-202ENST00000343420 SBF2Q86WG5 1849 aa23.59■■□□□ 1.37
CD55-202ENST00000343420 MYOM1P52179 1685 aa23.58■■□□□ 1.37
CD55-202ENST00000343420 EZH2Q15910 746 aaKnown RBP23.58■■□□□ 1.37
CD55-202ENST00000343420 ANKRD24Q8TF21 1146 aa23.58■■□□□ 1.37
CD55-202ENST00000343420 CAMKK2Q96RR4 588 aa23.58■■□□□ 1.37
CD55-202ENST00000343420 IP6K1Q92551 441 aa23.57■■□□□ 1.36
CD55-202ENST00000343420 NLRP2Q9NX02 1062 aa23.57■■□□□ 1.36
CD55-202ENST00000343420 PARD3Q8TEW0 1356 aa23.56■■□□□ 1.36
CD55-202ENST00000343420 FYB1O15117 783 aa23.56■■□□□ 1.36
CD55-202ENST00000343420 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
CD55-202ENST00000343420 EXOC5O00471 708 aa23.55■■□□□ 1.36
CD55-202ENST00000343420 MARCH10Q8NA82 808 aaPredicted RBP23.55■■□□□ 1.36
CD55-202ENST00000343420 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
CD55-202ENST00000343420 MAP3K19Q56UN5 1328 aa23.54■■□□□ 1.36
CD55-202ENST00000343420 FAM208AQ9UK61 1670 aaKnown RBP23.54■■□□□ 1.36
CD55-202ENST00000343420 BCL9O00512 1426 aa23.53■■□□□ 1.36
CD55-202ENST00000343420 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
CD55-202ENST00000343420 RREB1Q92766 1687 aa23.53■■□□□ 1.36
CD55-202ENST00000343420 TNS2Q63HR2 1409 aa23.51■■□□□ 1.35
CD55-202ENST00000343420 FBLN1P23142 703 aa23.51■■□□□ 1.35
CD55-202ENST00000343420 AMPHP49418 695 aa23.51■■□□□ 1.35
CD55-202ENST00000343420 EIF4G2P78344 907 aaKnown RBP eCLIP23.51■■□□□ 1.35
CD55-202ENST00000343420 PSDA5PKW4 1024 aaPredicted RBP23.5■■□□□ 1.35
CD55-202ENST00000343420 IL2RBP14784 551 aa23.5■■□□□ 1.35
CD55-202ENST00000343420 HOXC9P31274 260 aa23.5■■□□□ 1.35
CD55-202ENST00000343420 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
CD55-202ENST00000343420 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
CD55-202ENST00000343420 BCL11BQ9C0K0 894 aaPredicted RBP23.49■■□□□ 1.35
CD55-202ENST00000343420 NUP188Q5SRE5 1749 aa23.48■■□□□ 1.35
CD55-202ENST00000343420 RGPD3A6NKT7 1758 aaPredicted RBP23.48■■□□□ 1.35
CD55-202ENST00000343420 RGPD4Q7Z3J3 1758 aa23.48■■□□□ 1.35
CD55-202ENST00000343420 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
CD55-202ENST00000343420 NSD3Q9BZ95 1437 aa23.48■■□□□ 1.35
CD55-202ENST00000343420 HSPA5P11021 654 aaKnown RBP23.47■■□□□ 1.35
CD55-202ENST00000343420 RRS1Q15050 365 aaKnown RBP23.47■■□□□ 1.35
CD55-202ENST00000343420 R3HDM1Q15032 1099 aaKnown RBP23.46■■□□□ 1.35
CD55-202ENST00000343420 KAT6BQ8WYB5 2073 aa23.46■■□□□ 1.35
CD55-202ENST00000343420 RGPD2P0DJD1 1756 aa23.45■■□□□ 1.34
CD55-202ENST00000343420 PLSCR1O15162 318 aa23.45■■□□□ 1.34
CD55-202ENST00000343420 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
CD55-202ENST00000343420 LRP5O75197 1615 aa23.44■■□□□ 1.34
CD55-202ENST00000343420 PTF1AQ7RTS3 328 aa23.43■■□□□ 1.34
CD55-202ENST00000343420 NBPF14Q5TI25 921 aa23.42■■□□□ 1.34
CD55-202ENST00000343420 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
CD55-202ENST00000343420 NHSQ6T4R5 1651 aa23.4■■□□□ 1.34
CD55-202ENST00000343420 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
CD55-202ENST00000343420 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
CD55-202ENST00000343420 FLT4P35916 1363 aa23.39■■□□□ 1.33
CD55-202ENST00000343420 INSRP06213 1382 aa23.38■■□□□ 1.33
CD55-202ENST00000343420 MAP2P11137 1827 aaKnown RBP23.38■■□□□ 1.33
CD55-202ENST00000343420 KCNQ2O43526 872 aa23.36■■□□□ 1.33
CD55-202ENST00000343420 HSP90AB2PQ58FF8 381 aa23.36■■□□□ 1.33
CD55-202ENST00000343420 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
CD55-202ENST00000343420 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
CD55-202ENST00000343420 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
CD55-202ENST00000343420 ANKRD26Q9UPS8 1709 aa23.35■■□□□ 1.33
CD55-202ENST00000343420 PROM2Q8N271 834 aa23.34■■□□□ 1.33
CD55-202ENST00000343420 DDX54Q8TDD1 881 aaKnown RBP23.34■■□□□ 1.33
CD55-202ENST00000343420 EMILIN1Q9Y6C2 1016 aa23.34■■□□□ 1.33
CD55-202ENST00000343420 BTAF1O14981 1849 aa23.33■■□□□ 1.32
CD55-202ENST00000343420 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.32
CD55-202ENST00000343420 MEGF6O75095 1541 aa23.33■■□□□ 1.32
CD55-202ENST00000343420 ZCRB1Q8TBF4 217 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms