RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
HIPK1-201ENST00000340480 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
HIPK1-201ENST00000340480 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 KIAA1210Q9ULL0 1709 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 CEBPAP49715 358 aaPredicted RBP9.37□□□□□ -0.91
HIPK1-201ENST00000340480 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
HIPK1-201ENST00000340480 FLT4P35916 1363 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 CHAF1AQ13111 956 aaPredicted RBP9.36□□□□□ -0.91
HIPK1-201ENST00000340480 DIP2CQ9Y2E4 1556 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 PLEKHG3A1L390 1219 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 POLKQ9UBT6 870 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 PDZRN3Q9UPQ7 1066 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
HIPK1-201ENST00000340480 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
HIPK1-201ENST00000340480 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 CDC45O75419 566 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 INTS3Q68E01 1043 aaKnown RBP9.35□□□□□ -0.91
HIPK1-201ENST00000340480 PIK3R4Q99570 1358 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 PTPRCP08575 1304 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 KIAA2012Q0VF49 1180 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 RUFY2Q8WXA3 655 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
HIPK1-201ENST00000340480 APBB1O00213 710 aa9.34□□□□□ -0.91
HIPK1-201ENST00000340480 UBTFL1P0CB47 393 aaPredicted RBP9.34□□□□□ -0.91
HIPK1-201ENST00000340480 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
HIPK1-201ENST00000340480 CEP152O94986 1710 aa9.34□□□□□ -0.91
HIPK1-201ENST00000340480 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
HIPK1-201ENST00000340480 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
HIPK1-201ENST00000340480 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
HIPK1-201ENST00000340480 GNAI2P04899 355 aa9.34□□□□□ -0.91
HIPK1-201ENST00000340480 LRRFIP1Q32MZ4 808 aaKnown RBP9.34□□□□□ -0.91
HIPK1-201ENST00000340480 GOLGA6L4A6NEF3 574 aa9.34□□□□□ -0.91
HIPK1-201ENST00000340480 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
HIPK1-201ENST00000340480 NRXN1Q9ULB1 1477 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 BCORL1Q5H9F3 1711 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 PPRC1Q5VV67 1664 aaKnown RBP9.33□□□□□ -0.92
HIPK1-201ENST00000340480 TAOK2Q9UL54 1235 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 KIDINS220Q9ULH0 1771 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 GNL2Q13823 731 aaKnown RBP9.33□□□□□ -0.92
HIPK1-201ENST00000340480 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 LNPKQ9C0E8 428 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 CAMSAP1Q5T5Y3 1602 aa9.33□□□□□ -0.92
HIPK1-201ENST00000340480 DDX11L8A8MPP1 907 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 ERC2O15083 957 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 SLC4A2P04920 1241 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 BABAM1Q9NWV8 329 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 EIF2S2P20042 333 aaKnown RBP9.32□□□□□ -0.92
HIPK1-201ENST00000340480 EVA1CP58658 441 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 NUTM2GQ5VZR2 741 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 ERC1Q8IUD2 1116 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 C22orf23Q9BZE7 217 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 A2ML1A8K2U0 1454 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 ABCA6Q8N139 1617 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 HDAC1Q13547 482 aaPredicted RBP9.32□□□□□ -0.92
HIPK1-201ENST00000340480 TAF7Q15545 349 aaPredicted RBP9.32□□□□□ -0.92
HIPK1-201ENST00000340480 SRCIN1Q9C0H9 1055 aa9.32□□□□□ -0.92
HIPK1-201ENST00000340480 TMEM57Q8N5G2 664 aa9.31□□□□□ -0.92
HIPK1-201ENST00000340480 SBNO1A3KN83 1393 aa9.31□□□□□ -0.92
HIPK1-201ENST00000340480 MED14O60244 1454 aa9.31□□□□□ -0.92
HIPK1-201ENST00000340480 TRIM27P14373 513 aa9.31□□□□□ -0.92
HIPK1-201ENST00000340480 MEX3CQ5U5Q3 659 aaKnown RBP9.31□□□□□ -0.92
HIPK1-201ENST00000340480 CHMP5Q9NZZ3 219 aa9.31□□□□□ -0.92
HIPK1-201ENST00000340480 C20orf194Q5TEA3 1177 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
HIPK1-201ENST00000340480 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 ZNF521Q96K83 1311 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 DLC1Q96QB1 1528 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 KIF24Q5T7B8 1368 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 SLKQ9H2G2 1235 aaPredicted RBP9.3□□□□□ -0.92
HIPK1-201ENST00000340480 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.92
HIPK1-201ENST00000340480 CCDC34Q96HJ3 373 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 RSPH6AQ9H0K4 717 aa9.3□□□□□ -0.92
HIPK1-201ENST00000340480 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
HIPK1-201ENST00000340480 SKOR2Q2VWA4 1001 aaPredicted RBP9.3□□□□□ -0.92
HIPK1-201ENST00000340480 KIF3AQ9Y496 699 aa9.29□□□□□ -0.92
HIPK1-201ENST00000340480 TAF7LQ5H9L4 462 aa9.29□□□□□ -0.92
HIPK1-201ENST00000340480 SYAP1Q96A49 352 aaPredicted RBP9.29□□□□□ -0.92
HIPK1-201ENST00000340480 EIF4A2Q14240 407 aaKnown RBP9.29□□□□□ -0.92
HIPK1-201ENST00000340480 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
HIPK1-201ENST00000340480 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
HIPK1-201ENST00000340480 DIAPH3Q9NSV4 1193 aa9.29□□□□□ -0.92
HIPK1-201ENST00000340480 IFIT2P09913 472 aaKnown RBP9.29□□□□□ -0.92
HIPK1-201ENST00000340480 MCM2P49736 904 aa9.29□□□□□ -0.92
HIPK1-201ENST00000340480 GORABQ5T7V8 394 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 IL13P35225 146 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 TRMT2AQ8IZ69 625 aaKnown RBP9.28□□□□□ -0.92
HIPK1-201ENST00000340480 CLASRPQ8N2M8 674 aaKnown RBP9.28□□□□□ -0.92
HIPK1-201ENST00000340480 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
HIPK1-201ENST00000340480 KCNA6P17658 529 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 DMRT2Q9Y5R5 561 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 HIP1O00291 1037 aa9.28□□□□□ -0.92
HIPK1-201ENST00000340480 RABEP1Q15276 862 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms