RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
PRDM8-201ENST00000339711 NLRP2Q9NX02 1062 aa20.54■□□□□ 0.88
PRDM8-201ENST00000339711 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
PRDM8-201ENST00000339711 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
PRDM8-201ENST00000339711 PHACTR3Q96KR7 559 aa20.54■□□□□ 0.88
PRDM8-201ENST00000339711 GLI2P10070 1586 aa20.54■□□□□ 0.88
PRDM8-201ENST00000339711 TMEM57Q8N5G2 664 aa20.53■□□□□ 0.88
PRDM8-201ENST00000339711 TAOK2Q9UL54 1235 aa20.53■□□□□ 0.88
PRDM8-201ENST00000339711 PTMAP06454 111 aaKnown RBP20.52■□□□□ 0.88
PRDM8-201ENST00000339711 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
PRDM8-201ENST00000339711 AEBP1Q8IUX7 1158 aa20.52■□□□□ 0.88
PRDM8-201ENST00000339711 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
PRDM8-201ENST00000339711 SETBP1Q9Y6X0 1596 aa20.52■□□□□ 0.88
PRDM8-201ENST00000339711 TRIM27P14373 513 aa20.52■□□□□ 0.87
PRDM8-201ENST00000339711 GLIPR1L2Q4G1C9 344 aa20.52■□□□□ 0.87
PRDM8-201ENST00000339711 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.87
PRDM8-201ENST00000339711 SLC4A2P04920 1241 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 C1orf115Q9H7X2 142 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 KCNH5Q8NCM2 988 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 CFAP44Q96MT7 982 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 RSPH6AQ9H0K4 717 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 MROH1Q8NDA8 1641 aa20.51■□□□□ 0.87
PRDM8-201ENST00000339711 DIP2BQ9P265 1576 aa20.5■□□□□ 0.87
PRDM8-201ENST00000339711 PLEKHO1Q53GL0 409 aaPredicted RBP20.49■□□□□ 0.87
PRDM8-201ENST00000339711 ZNF521Q96K83 1311 aa20.49■□□□□ 0.87
PRDM8-201ENST00000339711 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
PRDM8-201ENST00000339711 PLEKHG3A1L390 1219 aa20.48■□□□□ 0.87
PRDM8-201ENST00000339711 USHBP1Q8N6Y0 703 aa20.48■□□□□ 0.87
PRDM8-201ENST00000339711 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
PRDM8-201ENST00000339711 IL13P35225 146 aa20.47■□□□□ 0.87
PRDM8-201ENST00000339711 PLEKHG1Q9ULL1 1385 aa20.47■□□□□ 0.87
PRDM8-201ENST00000339711 ZC3H6P61129 1189 aaKnown RBP20.47■□□□□ 0.87
PRDM8-201ENST00000339711 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
PRDM8-201ENST00000339711 ZNF530Q6P9A1 599 aaPredicted RBP20.47■□□□□ 0.87
PRDM8-201ENST00000339711 ROBO2Q9HCK4 1378 aa20.47■□□□□ 0.87
PRDM8-201ENST00000339711 NEXMIFQ5QGS0 1516 aa20.46■□□□□ 0.87
PRDM8-201ENST00000339711 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
PRDM8-201ENST00000339711 GNAT3A8MTJ3 354 aa20.46■□□□□ 0.87
PRDM8-201ENST00000339711 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
PRDM8-201ENST00000339711 ALKQ9UM73 1620 aa20.46■□□□□ 0.87
PRDM8-201ENST00000339711 DNTTIP2Q5QJE6 756 aaKnown RBP20.45■□□□□ 0.86
PRDM8-201ENST00000339711 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
PRDM8-201ENST00000339711 AGLP35573 1532 aa20.45■□□□□ 0.86
PRDM8-201ENST00000339711 MAP3K19Q56UN5 1328 aa20.45■□□□□ 0.86
PRDM8-201ENST00000339711 IGHDP01880 384 aa20.45■□□□□ 0.86
PRDM8-201ENST00000339711 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
PRDM8-201ENST00000339711 RLBP1P12271 317 aa20.43■□□□□ 0.86
PRDM8-201ENST00000339711 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
PRDM8-201ENST00000339711 HDGFL1Q5TGJ6 251 aa20.43■□□□□ 0.86
PRDM8-201ENST00000339711 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
PRDM8-201ENST00000339711 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
PRDM8-201ENST00000339711 MSH5O43196 834 aa20.42■□□□□ 0.86
PRDM8-201ENST00000339711 EVA1CP58658 441 aa20.42■□□□□ 0.86
PRDM8-201ENST00000339711 PRR36Q9H6K5 1346 aa20.42■□□□□ 0.86
PRDM8-201ENST00000339711 QRICH2Q9H0J4 1663 aa20.42■□□□□ 0.86
PRDM8-201ENST00000339711 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
PRDM8-201ENST00000339711 NEURL4Q96JN8 1562 aa20.41■□□□□ 0.86
PRDM8-201ENST00000339711 PCDHB15Q9Y5E8 787 aa20.41■□□□□ 0.86
PRDM8-201ENST00000339711 FAM135BQ49AJ0 1406 aa20.41■□□□□ 0.86
PRDM8-201ENST00000339711 KRT28Q7Z3Y7 464 aa20.4■□□□□ 0.86
PRDM8-201ENST00000339711 TTC5Q8N0Z6 440 aa20.4■□□□□ 0.86
PRDM8-201ENST00000339711 PIK3C2BO00750 1634 aa20.4■□□□□ 0.86
PRDM8-201ENST00000339711 FLT4P35916 1363 aa20.4■□□□□ 0.86
PRDM8-201ENST00000339711 CLTCQ00610 1675 aaKnown RBP20.4■□□□□ 0.86
PRDM8-201ENST00000339711 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
PRDM8-201ENST00000339711 ATP7BP35670 1465 aa20.4■□□□□ 0.86
PRDM8-201ENST00000339711 ADGRB1O14514 1584 aa20.39■□□□□ 0.85
PRDM8-201ENST00000339711 ZC3H13Q5T200 1668 aaKnown RBP20.39■□□□□ 0.85
PRDM8-201ENST00000339711 MROH2AA6NES4 1674 aa20.39■□□□□ 0.85
PRDM8-201ENST00000339711 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.85
PRDM8-201ENST00000339711 TRIM6-TRIM34B2RNG4 842 aa20.38■□□□□ 0.85
PRDM8-201ENST00000339711 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
PRDM8-201ENST00000339711 GCC1Q96CN9 775 aa20.38■□□□□ 0.85
PRDM8-201ENST00000339711 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
PRDM8-201ENST00000339711 PLEKHF1Q96S99 279 aa20.38■□□□□ 0.85
PRDM8-201ENST00000339711 EYA1Q99502 592 aa20.38■□□□□ 0.85
PRDM8-201ENST00000339711 C9orf78Q9NZ63 289 aaPredicted RBP20.37■□□□□ 0.85
PRDM8-201ENST00000339711 KCNJ4P48050 445 aa20.37■□□□□ 0.85
PRDM8-201ENST00000339711 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
PRDM8-201ENST00000339711 VAMP4O75379 141 aa20.36■□□□□ 0.85
PRDM8-201ENST00000339711 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
PRDM8-201ENST00000339711 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
PRDM8-201ENST00000339711 GNAI3P08754 354 aa20.36■□□□□ 0.85
PRDM8-201ENST00000339711 GSE1Q14687 1217 aa20.35■□□□□ 0.85
PRDM8-201ENST00000339711 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
PRDM8-201ENST00000339711 L1TD1Q5T7N2 865 aaKnown RBP20.35■□□□□ 0.85
PRDM8-201ENST00000339711 PTPRMP28827 1452 aa20.35■□□□□ 0.85
PRDM8-201ENST00000339711 CCT4P50991 539 aaKnown RBP20.34■□□□□ 0.85
PRDM8-201ENST00000339711 UBTFL1P0CB47 393 aaPredicted RBP20.34■□□□□ 0.85
PRDM8-201ENST00000339711 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
PRDM8-201ENST00000339711 FOXD4L5Q5VV16 416 aaPredicted RBP20.34■□□□□ 0.85
PRDM8-201ENST00000339711 FOXD4L4Q8WXT5 416 aaPredicted RBP20.34■□□□□ 0.85
PRDM8-201ENST00000339711 RICTORQ6R327 1708 aa20.34■□□□□ 0.85
PRDM8-201ENST00000339711 DDX58O95786 925 aaKnown RBP20.33■□□□□ 0.85
PRDM8-201ENST00000339711 CHD1LQ86WJ1 897 aa20.33■□□□□ 0.85
PRDM8-201ENST00000339711 MCCP23508 829 aa20.33■□□□□ 0.84
PRDM8-201ENST00000339711 AIMP1Q12904 312 aaKnown RBP20.33■□□□□ 0.84
PRDM8-201ENST00000339711 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ARID3AQ99856 593 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms