RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 TCP11L2Q8N4U5 519 aa29.27■■■□□ 2.28
RAB28-203ENST00000338176 OVOS2A0A0J9YW53 1432 aa29.26■■■□□ 2.27
RAB28-203ENST00000338176 OVOS2Q6IE36 1432 aa29.26■■■□□ 2.27
RAB28-203ENST00000338176 BARGINQ6ZT62 677 aa29.26■■■□□ 2.27
RAB28-203ENST00000338176 CRB1P82279 1406 aa29.26■■■□□ 2.27
RAB28-203ENST00000338176 HSPA5P11021 654 aaKnown RBP29.25■■■□□ 2.27
RAB28-203ENST00000338176 MYOM1P52179 1685 aa29.25■■■□□ 2.27
RAB28-203ENST00000338176 CDCA8Q53HL2 280 aa29.24■■■□□ 2.27
RAB28-203ENST00000338176 TOM1L2Q6ZVM7 507 aa29.24■■■□□ 2.27
RAB28-203ENST00000338176 LTN1O94822 1766 aa29.23■■■□□ 2.27
RAB28-203ENST00000338176 BLMP54132 1417 aaPredicted RBP29.23■■■□□ 2.27
RAB28-203ENST00000338176 FBLN1P23142 703 aa29.22■■■□□ 2.27
RAB28-203ENST00000338176 WDR17Q8IZU2 1322 aa29.22■■■□□ 2.27
RAB28-203ENST00000338176 CCDC125Q86Z20 511 aa29.21■■■□□ 2.27
RAB28-203ENST00000338176 EIF4G2P78344 907 aaKnown RBP eCLIP29.21■■■□□ 2.27
RAB28-203ENST00000338176 DEFB132Q7Z7B7 95 aa29.21■■■□□ 2.27
RAB28-203ENST00000338176 POLR3GLQ9BT43 218 aa29.21■■■□□ 2.27
RAB28-203ENST00000338176 THRAP3Q9Y2W1 955 aaKnown RBP29.19■■■□□ 2.26
RAB28-203ENST00000338176 CSB-PGBD3P0DP91 1061 aa29.18■■■□□ 2.26
RAB28-203ENST00000338176 CARD14Q9BXL6 1004 aa29.18■■■□□ 2.26
RAB28-203ENST00000338176 COG3Q96JB2 828 aa29.17■■■□□ 2.26
RAB28-203ENST00000338176 GGNBP2Q9H3C7 697 aa29.17■■■□□ 2.26
RAB28-203ENST00000338176 FYB1O15117 783 aa29.16■■■□□ 2.26
RAB28-203ENST00000338176 PARP4Q9UKK3 1724 aaKnown RBP29.14■■■□□ 2.26
RAB28-203ENST00000338176 PDE3BQ13370 1112 aa29.14■■■□□ 2.26
RAB28-203ENST00000338176 ABCC6O95255 1503 aa29.14■■■□□ 2.26
RAB28-203ENST00000338176 SF3B2Q13435 895 aaKnown RBP29.13■■■□□ 2.25
RAB28-203ENST00000338176 WNK3Q9BYP7 1800 aa29.12■■■□□ 2.25
RAB28-203ENST00000338176 CARD10Q9BWT7 1032 aa29.12■■■□□ 2.25
RAB28-203ENST00000338176 NSD3Q9BZ95 1437 aa29.11■■■□□ 2.25
RAB28-203ENST00000338176 ERBB3P21860 1342 aa29.11■■■□□ 2.25
RAB28-203ENST00000338176 KIF20BQ96Q89 1820 aa29.11■■■□□ 2.25
RAB28-203ENST00000338176 LRRC37A3O60309 1634 aa29.1■■■□□ 2.25
RAB28-203ENST00000338176 ANKRD24Q8TF21 1146 aa29.1■■■□□ 2.25
RAB28-203ENST00000338176 MAP3K19Q56UN5 1328 aa29.09■■■□□ 2.25
RAB28-203ENST00000338176 C11orf95C9JLR9 678 aaPredicted RBP29.09■■■□□ 2.25
RAB28-203ENST00000338176 TRIM37O94972 964 aa29.08■■■□□ 2.25
RAB28-203ENST00000338176 FAM196AQ6ZSG2 479 aa29.08■■■□□ 2.25
RAB28-203ENST00000338176 RGPD1P0DJD0 1748 aa29.07■■■□□ 2.24
RAB28-203ENST00000338176 RRS1Q15050 365 aaKnown RBP29.07■■■□□ 2.24
RAB28-203ENST00000338176 IP6K1Q92551 441 aa29.07■■■□□ 2.24
RAB28-203ENST00000338176 LTV1Q96GA3 475 aaPredicted RBP29.07■■■□□ 2.24
RAB28-203ENST00000338176 NLRP2Q9NX02 1062 aa29.07■■■□□ 2.24
RAB28-203ENST00000338176 TNS1Q9HBL0 1735 aaKnown RBP29.07■■■□□ 2.24
RAB28-203ENST00000338176 DISP2A7MBM2 1401 aa29.06■■■□□ 2.24
RAB28-203ENST00000338176 DDB1Q16531 1140 aa29.05■■■□□ 2.24
RAB28-203ENST00000338176 EN1Q05925 392 aaPredicted RBP29.03■■■□□ 2.24
RAB28-203ENST00000338176 HOXC9P31274 260 aa29.03■■■□□ 2.24
RAB28-203ENST00000338176 AMPHP49418 695 aa29.03■■■□□ 2.24
RAB28-203ENST00000338176 CCDC7Q96M83 1385 aa29.02■■■□□ 2.24
RAB28-203ENST00000338176 BAG6P46379 1132 aa29.02■■■□□ 2.24
RAB28-203ENST00000338176 PEAK1Q9H792 1746 aa29.01■■■□□ 2.23
RAB28-203ENST00000338176 MARCH10Q8NA82 808 aaPredicted RBP29■■■□□ 2.23
RAB28-203ENST00000338176 CDCA7Q9BWT1 371 aaPredicted RBP28.98■■■□□ 2.23
RAB28-203ENST00000338176 RGPD2P0DJD1 1756 aa28.98■■■□□ 2.23
RAB28-203ENST00000338176 PANK3Q9H999 370 aa28.97■■■□□ 2.23
RAB28-203ENST00000338176 OVOS2A0A0G2JMS6 1433 aa28.97■■■□□ 2.23
RAB28-203ENST00000338176 APBA3O96018 575 aa28.96■■■□□ 2.23
RAB28-203ENST00000338176 EZH2Q15910 746 aaKnown RBP28.96■■■□□ 2.23
RAB28-203ENST00000338176 EXOC5O00471 708 aa28.95■■■□□ 2.22
RAB28-203ENST00000338176 PTF1AQ7RTS3 328 aa28.95■■■□□ 2.22
RAB28-203ENST00000338176 SRCAPQ6ZRS2 3230 aa28.94■■■□□ 2.22
RAB28-203ENST00000338176 SBF2Q86WG5 1849 aa28.94■■■□□ 2.22
RAB28-203ENST00000338176 CGNL1Q0VF96 1302 aa28.93■■■□□ 2.22
RAB28-203ENST00000338176 IL2RBP14784 551 aa28.93■■■□□ 2.22
RAB28-203ENST00000338176 EMILIN1Q9Y6C2 1016 aa28.93■■■□□ 2.22
RAB28-203ENST00000338176 TNS2Q63HR2 1409 aa28.92■■■□□ 2.22
RAB28-203ENST00000338176 RTL1A6NKG5 1358 aa28.92■■■□□ 2.22
RAB28-203ENST00000338176 HSP90AB2PQ58FF8 381 aa28.92■■■□□ 2.22
RAB28-203ENST00000338176 FAM208AQ9UK61 1670 aaKnown RBP28.91■■■□□ 2.22
RAB28-203ENST00000338176 CAMKK2Q96RR4 588 aa28.91■■■□□ 2.22
RAB28-203ENST00000338176 KIF7Q2M1P5 1343 aa28.9■■■□□ 2.22
RAB28-203ENST00000338176 USHBP1Q8N6Y0 703 aa28.88■■■□□ 2.21
RAB28-203ENST00000338176 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
RAB28-203ENST00000338176 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
RAB28-203ENST00000338176 TNNT2P45379 298 aaPredicted RBP28.87■■■□□ 2.21
RAB28-203ENST00000338176 PPM1GO15355 546 aaPredicted RBP28.86■■■□□ 2.21
RAB28-203ENST00000338176 MAP2P11137 1827 aaKnown RBP28.86■■■□□ 2.21
RAB28-203ENST00000338176 PSDA5PKW4 1024 aaPredicted RBP28.85■■■□□ 2.21
RAB28-203ENST00000338176 FLT4P35916 1363 aa28.85■■■□□ 2.21
RAB28-203ENST00000338176 ANKRD26Q9UPS8 1709 aa28.85■■■□□ 2.21
RAB28-203ENST00000338176 INSRP06213 1382 aa28.85■■■□□ 2.21
RAB28-203ENST00000338176 MEGF6O75095 1541 aa28.82■■■□□ 2.2
RAB28-203ENST00000338176 BCL9O00512 1426 aa28.82■■■□□ 2.2
RAB28-203ENST00000338176 KCNQ2O43526 872 aa28.82■■■□□ 2.2
RAB28-203ENST00000338176 ACSBG1Q96GR2 724 aa28.81■■■□□ 2.2
RAB28-203ENST00000338176 BCL11BQ9C0K0 894 aaPredicted RBP28.81■■■□□ 2.2
RAB28-203ENST00000338176 POLKQ9UBT6 870 aa28.8■■■□□ 2.2
RAB28-203ENST00000338176 RREB1Q92766 1687 aa28.8■■■□□ 2.2
RAB28-203ENST00000338176 SMG6Q86US8 1419 aaKnown RBP28.8■■■□□ 2.2
RAB28-203ENST00000338176 DDX54Q8TDD1 881 aaKnown RBP28.8■■■□□ 2.2
RAB28-203ENST00000338176 KIF24Q5T7B8 1368 aa28.79■■■□□ 2.2
RAB28-203ENST00000338176 NUP188Q5SRE5 1749 aa28.78■■■□□ 2.2
RAB28-203ENST00000338176 R3HDM1Q15032 1099 aaKnown RBP28.77■■■□□ 2.2
RAB28-203ENST00000338176 KAT6BQ8WYB5 2073 aa28.76■■■□□ 2.2
RAB28-203ENST00000338176 PARD3Q8TEW0 1356 aa28.76■■■□□ 2.19
RAB28-203ENST00000338176 SHANK3Q9BYB0 1731 aa28.76■■■□□ 2.19
RAB28-203ENST00000338176 KNSTRNQ9Y448 316 aa28.75■■■□□ 2.19
RAB28-203ENST00000338176 WASHC2AQ641Q2 1341 aa28.74■■■□□ 2.19
RAB28-203ENST00000338176 NHSQ6T4R5 1651 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms