RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 OVOS2Q6IE36 1432 aa34.84■■■■□ 3.17
CDKN3-202ENST00000335183 AXIN2Q9Y2T1 843 aa34.83■■■■□ 3.17
CDKN3-202ENST00000335183 C11orf95C9JLR9 678 aaPredicted RBP34.82■■■■□ 3.16
CDKN3-202ENST00000335183 DDB1Q16531 1140 aa34.82■■■■□ 3.16
CDKN3-202ENST00000335183 NBPF14Q5TI25 921 aa34.82■■■■□ 3.16
CDKN3-202ENST00000335183 KCNH5Q8NCM2 988 aa34.82■■■■□ 3.16
CDKN3-202ENST00000335183 WDR17Q8IZU2 1322 aa34.81■■■■□ 3.16
CDKN3-202ENST00000335183 TTC21AQ8NDW8 1320 aa34.81■■■■□ 3.16
CDKN3-202ENST00000335183 MON2Q7Z3U7 1717 aa34.8■■■■□ 3.16
CDKN3-202ENST00000335183 KTN1Q86UP2 1357 aaKnown RBP34.79■■■■□ 3.16
CDKN3-202ENST00000335183 ARHGEF25Q86VW2 580 aa34.79■■■■□ 3.16
CDKN3-202ENST00000335183 CSB-PGBD3P0DP91 1061 aa34.76■■■■□ 3.16
CDKN3-202ENST00000335183 RGPD3A6NKT7 1758 aaPredicted RBP34.74■■■■□ 3.15
CDKN3-202ENST00000335183 RGPD4Q7Z3J3 1758 aa34.74■■■■□ 3.15
CDKN3-202ENST00000335183 NFAT5O94916 1531 aa34.74■■■■□ 3.15
CDKN3-202ENST00000335183 CDCA7Q9BWT1 371 aaPredicted RBP34.71■■■■□ 3.15
CDKN3-202ENST00000335183 CARD11Q9BXL7 1154 aa34.71■■■■□ 3.15
CDKN3-202ENST00000335183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.7■■■■□ 3.15
CDKN3-202ENST00000335183 SBNO2Q9Y2G9 1366 aa34.7■■■■□ 3.15
CDKN3-202ENST00000335183 MARCH10Q8NA82 808 aaPredicted RBP34.69■■■■□ 3.14
CDKN3-202ENST00000335183 CARD10Q9BWT7 1032 aa34.69■■■■□ 3.14
CDKN3-202ENST00000335183 LTN1O94822 1766 aa34.67■■■■□ 3.14
CDKN3-202ENST00000335183 PLSCR1O15162 318 aa34.66■■■■□ 3.14
CDKN3-202ENST00000335183 PTF1AQ7RTS3 328 aa34.66■■■■□ 3.14
CDKN3-202ENST00000335183 TMC1Q8TDI8 760 aa34.66■■■■□ 3.14
CDKN3-202ENST00000335183 USP54Q70EL1 1684 aa34.66■■■■□ 3.14
CDKN3-202ENST00000335183 BCL11BQ9C0K0 894 aaPredicted RBP34.65■■■■□ 3.14
CDKN3-202ENST00000335183 ABCC6O95255 1503 aa34.65■■■■□ 3.14
CDKN3-202ENST00000335183 CD163L1Q9NR16 1453 aa34.63■■■■□ 3.13
CDKN3-202ENST00000335183 CCDC7Q96M83 1385 aa34.62■■■■□ 3.13
CDKN3-202ENST00000335183 NME9Q86XW9 330 aa34.62■■■■□ 3.13
CDKN3-202ENST00000335183 USP31Q70CQ4 1352 aa34.62■■■■□ 3.13
CDKN3-202ENST00000335183 TONSLQ96HA7 1378 aa34.62■■■■□ 3.13
CDKN3-202ENST00000335183 EXOC5O00471 708 aa34.61■■■■□ 3.13
CDKN3-202ENST00000335183 SPON1Q9HCB6 807 aa34.6■■■■□ 3.13
CDKN3-202ENST00000335183 BCL9O00512 1426 aa34.59■■■■□ 3.13
CDKN3-202ENST00000335183 HDGFL2Q7Z4V5 671 aaPredicted RBP34.59■■■■□ 3.13
CDKN3-202ENST00000335183 SLC12A5Q9H2X9 1139 aa34.58■■■■□ 3.13
CDKN3-202ENST00000335183 PPP1R1BQ9UD71 204 aaPredicted RBP34.58■■■■□ 3.13
CDKN3-202ENST00000335183 KCNQ2O43526 872 aa34.57■■■■□ 3.12
CDKN3-202ENST00000335183 ANO8Q9HCE9 1232 aaPredicted RBP34.56■■■■□ 3.12
CDKN3-202ENST00000335183 TNS2Q63HR2 1409 aa34.55■■■■□ 3.12
CDKN3-202ENST00000335183 NLRP2Q9NX02 1062 aa34.54■■■■□ 3.12
CDKN3-202ENST00000335183 ERBB3P21860 1342 aa34.54■■■■□ 3.12
CDKN3-202ENST00000335183 CASZ1Q86V15 1759 aa34.53■■■■□ 3.12
CDKN3-202ENST00000335183 EDC4Q6P2E9 1401 aaKnown RBP34.53■■■■□ 3.12
CDKN3-202ENST00000335183 PROM2Q8N271 834 aa34.52■■■■□ 3.12
CDKN3-202ENST00000335183 TERF2IPQ9NYB0 399 aa34.51■■■■□ 3.12
CDKN3-202ENST00000335183 A0A1W2PP64 1363 aa34.5■■■■□ 3.11
CDKN3-202ENST00000335183 NHSQ6T4R5 1651 aa34.5■■■■□ 3.11
CDKN3-202ENST00000335183 KAT6BQ8WYB5 2073 aa34.5■■■■□ 3.11
CDKN3-202ENST00000335183 TXNRD1Q16881 649 aa34.47■■■■□ 3.11
CDKN3-202ENST00000335183 ANKRD24Q8TF21 1146 aa34.47■■■■□ 3.11
CDKN3-202ENST00000335183 IL2RBP14784 551 aa34.45■■■■□ 3.11
CDKN3-202ENST00000335183 ACSBG1Q96GR2 724 aa34.45■■■■□ 3.11
CDKN3-202ENST00000335183 PDGFDQ9GZP0 370 aaPredicted RBP34.44■■■■□ 3.1
CDKN3-202ENST00000335183 PUS7Q96PZ0 661 aaKnown RBP34.43■■■■□ 3.1
CDKN3-202ENST00000335183 STK32BQ9NY57 414 aa34.43■■■■□ 3.1
CDKN3-202ENST00000335183 NINLQ9Y2I6 1382 aa34.42■■■■□ 3.1
CDKN3-202ENST00000335183 BTAF1O14981 1849 aa34.4■■■■□ 3.1
CDKN3-202ENST00000335183 ZBTB7AO95365 584 aa34.4■■■■□ 3.1
CDKN3-202ENST00000335183 FAM208AQ9UK61 1670 aaKnown RBP34.38■■■■□ 3.09
CDKN3-202ENST00000335183 ST20-MTHFSA0A0A6YYL1 179 aa34.38■■■■□ 3.09
CDKN3-202ENST00000335183 SLC15A2Q16348 729 aa34.37■■■■□ 3.09
CDKN3-202ENST00000335183 MYOM1P52179 1685 aa34.36■■■■□ 3.09
CDKN3-202ENST00000335183 DCAF8L1A6NGE4 600 aa34.36■■■■□ 3.09
CDKN3-202ENST00000335183 LTV1Q96GA3 475 aaPredicted RBP34.36■■■■□ 3.09
CDKN3-202ENST00000335183 TESK2Q96S53 571 aa34.36■■■■□ 3.09
CDKN3-202ENST00000335183 IP6K1Q92551 441 aa34.34■■■■□ 3.09
CDKN3-202ENST00000335183 YY1P25490 414 aa34.33■■■■□ 3.09
CDKN3-202ENST00000335183 ATF5Q9Y2D1 282 aaPredicted RBP34.33■■■■□ 3.09
CDKN3-202ENST00000335183 COG3Q96JB2 828 aa34.32■■■■□ 3.08
CDKN3-202ENST00000335183 RGPD2P0DJD1 1756 aa34.31■■■■□ 3.08
CDKN3-202ENST00000335183 PTGER2P43116 358 aa34.28■■■■□ 3.08
CDKN3-202ENST00000335183 PAPPAQ13219 1627 aa34.28■■■■□ 3.08
CDKN3-202ENST00000335183 SLC24A1O60721 1099 aa34.27■■■■□ 3.08
CDKN3-202ENST00000335183 DDX54Q8TDD1 881 aaKnown RBP34.27■■■■□ 3.08
CDKN3-202ENST00000335183 MAP3K19Q56UN5 1328 aa34.27■■■■□ 3.08
CDKN3-202ENST00000335183 AMPHP49418 695 aa34.26■■■■□ 3.08
CDKN3-202ENST00000335183 FBLN1P23142 703 aa34.25■■■■□ 3.07
CDKN3-202ENST00000335183 HOXC9P31274 260 aa34.24■■■■□ 3.07
CDKN3-202ENST00000335183 ANKRD36BQ8N2N9 1353 aa34.23■■■■□ 3.07
CDKN3-202ENST00000335183 MTFR1LQ9H019 292 aa34.23■■■■□ 3.07
CDKN3-202ENST00000335183 DOT1LQ8TEK3 1739 aa34.21■■■■□ 3.07
CDKN3-202ENST00000335183 SHANK3Q9BYB0 1731 aa34.18■■■■□ 3.06
CDKN3-202ENST00000335183 TMF1P82094 1093 aa34.18■■■■□ 3.06
CDKN3-202ENST00000335183 LRRC4BQ9NT99 713 aa34.18■■■■□ 3.06
CDKN3-202ENST00000335183 ZNF827Q17R98 1081 aa34.17■■■■□ 3.06
CDKN3-202ENST00000335183 USP47Q96K76 1375 aa34.17■■■■□ 3.06
CDKN3-202ENST00000335183 SYTL4Q96C24 671 aaPredicted RBP34.16■■■■□ 3.06
CDKN3-202ENST00000335183 FHDC1Q9C0D6 1143 aaPredicted RBP34.16■■■■□ 3.06
CDKN3-202ENST00000335183 KIF20BQ96Q89 1820 aa34.16■■■■□ 3.06
CDKN3-202ENST00000335183 RRS1Q15050 365 aaKnown RBP34.15■■■■□ 3.06
CDKN3-202ENST00000335183 GGNBP2Q9H3C7 697 aa34.15■■■■□ 3.06
CDKN3-202ENST00000335183 SGIP1Q9BQI5 828 aa34.14■■■■□ 3.06
CDKN3-202ENST00000335183 RTL1A6NKG5 1358 aa34.13■■■■□ 3.05
CDKN3-202ENST00000335183 SYT17Q9BSW7 474 aa34.13■■■■□ 3.05
CDKN3-202ENST00000335183 MEGF6O75095 1541 aa34.13■■■■□ 3.05
CDKN3-202ENST00000335183 FYB1O15117 783 aa34.12■■■■□ 3.05
CDKN3-202ENST00000335183 QSER1Q2KHR3 1735 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms