RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 SPATA31A7Q8IWB4 1347 aa22.54■■□□□ 1.2
C11orf88-201ENST00000332814 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
C11orf88-201ENST00000332814 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
C11orf88-201ENST00000332814 ABCC6O95255 1503 aa22.52■■□□□ 1.2
C11orf88-201ENST00000332814 CSB-PGBD3P0DP91 1061 aa22.52■■□□□ 1.2
C11orf88-201ENST00000332814 USP35Q9P2H5 1018 aa22.51■■□□□ 1.19
C11orf88-201ENST00000332814 CCDC7Q96M83 1385 aa22.5■■□□□ 1.19
C11orf88-201ENST00000332814 FAM98CQ17RN3 349 aaKnown RBP22.5■■□□□ 1.19
C11orf88-201ENST00000332814 LARP1Q6PKG0 1096 aaKnown RBP22.5■■□□□ 1.19
C11orf88-201ENST00000332814 SPATA31A1Q5TZJ5 1347 aa22.5■■□□□ 1.19
C11orf88-201ENST00000332814 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
C11orf88-201ENST00000332814 CRB1P82279 1406 aa22.48■■□□□ 1.19
C11orf88-201ENST00000332814 LTN1O94822 1766 aa22.48■■□□□ 1.19
C11orf88-201ENST00000332814 SEPT12Q8IYM1 358 aa22.48■■□□□ 1.19
C11orf88-201ENST00000332814 KNSTRNQ9Y448 316 aa22.48■■□□□ 1.19
C11orf88-201ENST00000332814 AMPHP49418 695 aa22.47■■□□□ 1.19
C11orf88-201ENST00000332814 AXIN2Q9Y2T1 843 aa22.47■■□□□ 1.19
C11orf88-201ENST00000332814 WDR17Q8IZU2 1322 aa22.47■■□□□ 1.19
C11orf88-201ENST00000332814 COL18A1P39060 1754 aa22.47■■□□□ 1.19
C11orf88-201ENST00000332814 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
C11orf88-201ENST00000332814 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
C11orf88-201ENST00000332814 MAP3K19Q56UN5 1328 aa22.45■■□□□ 1.18
C11orf88-201ENST00000332814 NSD2O96028 1365 aa22.45■■□□□ 1.18
C11orf88-201ENST00000332814 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.18
C11orf88-201ENST00000332814 ONECUT3O60422 494 aaPredicted RBP22.44■■□□□ 1.18
C11orf88-201ENST00000332814 THRAP3Q9Y2W1 955 aaKnown RBP22.44■■□□□ 1.18
C11orf88-201ENST00000332814 RTL1A6NKG5 1358 aa22.43■■□□□ 1.18
C11orf88-201ENST00000332814 RRS1Q15050 365 aaKnown RBP22.43■■□□□ 1.18
C11orf88-201ENST00000332814 IP6K1Q92551 441 aa22.43■■□□□ 1.18
C11orf88-201ENST00000332814 BARGINQ6ZT62 677 aa22.42■■□□□ 1.18
C11orf88-201ENST00000332814 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
C11orf88-201ENST00000332814 ERBB3P21860 1342 aa22.41■■□□□ 1.18
C11orf88-201ENST00000332814 FBLN1P23142 703 aa22.41■■□□□ 1.18
C11orf88-201ENST00000332814 HOXC9P31274 260 aa22.41■■□□□ 1.18
C11orf88-201ENST00000332814 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
C11orf88-201ENST00000332814 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
C11orf88-201ENST00000332814 NLRP2Q9NX02 1062 aa22.4■■□□□ 1.18
C11orf88-201ENST00000332814 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
C11orf88-201ENST00000332814 RGPD5Q99666 1765 aa22.39■■□□□ 1.17
C11orf88-201ENST00000332814 THSD7AQ9UPZ6 1657 aa22.39■■□□□ 1.17
C11orf88-201ENST00000332814 SMG6Q86US8 1419 aaKnown RBP22.39■■□□□ 1.17
C11orf88-201ENST00000332814 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
C11orf88-201ENST00000332814 MORC1Q86VD1 984 aa22.38■■□□□ 1.17
C11orf88-201ENST00000332814 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
C11orf88-201ENST00000332814 FLT4P35916 1363 aa22.38■■□□□ 1.17
C11orf88-201ENST00000332814 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
C11orf88-201ENST00000332814 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
C11orf88-201ENST00000332814 CDCA7Q9BWT1 371 aaPredicted RBP22.36■■□□□ 1.17
C11orf88-201ENST00000332814 PDE3BQ13370 1112 aa22.35■■□□□ 1.17
C11orf88-201ENST00000332814 UPF1Q92900 1129 aaKnown RBP eCLIP22.34■■□□□ 1.17
C11orf88-201ENST00000332814 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
C11orf88-201ENST00000332814 BRWD3Q6RI45 1802 aa22.34■■□□□ 1.17
C11orf88-201ENST00000332814 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.17
C11orf88-201ENST00000332814 INSRP06213 1382 aa22.32■■□□□ 1.16
C11orf88-201ENST00000332814 DDB1Q16531 1140 aa22.31■■□□□ 1.16
C11orf88-201ENST00000332814 AMER1Q5JTC6 1135 aaPredicted RBP22.31■■□□□ 1.16
C11orf88-201ENST00000332814 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
C11orf88-201ENST00000332814 HSP90AB2PQ58FF8 381 aa22.3■■□□□ 1.16
C11orf88-201ENST00000332814 PEAK1Q9H792 1746 aa22.3■■□□□ 1.16
C11orf88-201ENST00000332814 PARP4Q9UKK3 1724 aaKnown RBP22.29■■□□□ 1.16
C11orf88-201ENST00000332814 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
C11orf88-201ENST00000332814 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
C11orf88-201ENST00000332814 POLKQ9UBT6 870 aa22.29■■□□□ 1.16
C11orf88-201ENST00000332814 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
C11orf88-201ENST00000332814 IL2RBP14784 551 aa22.28■■□□□ 1.16
C11orf88-201ENST00000332814 SF3B2Q13435 895 aaKnown RBP22.27■■□□□ 1.16
C11orf88-201ENST00000332814 LRRC37A3O60309 1634 aa22.27■■□□□ 1.16
C11orf88-201ENST00000332814 DISP2A7MBM2 1401 aa22.26■■□□□ 1.15
C11orf88-201ENST00000332814 EXOC5O00471 708 aa22.26■■□□□ 1.15
C11orf88-201ENST00000332814 FAM182BQ5T319 152 aa22.26■■□□□ 1.15
C11orf88-201ENST00000332814 CCDC125Q86Z20 511 aa22.26■■□□□ 1.15
C11orf88-201ENST00000332814 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
C11orf88-201ENST00000332814 FAM196AQ6ZSG2 479 aa22.25■■□□□ 1.15
C11orf88-201ENST00000332814 MAP2P11137 1827 aaKnown RBP22.23■■□□□ 1.15
C11orf88-201ENST00000332814 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
C11orf88-201ENST00000332814 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
C11orf88-201ENST00000332814 NBPF6Q5VWK0 638 aa22.22■■□□□ 1.15
C11orf88-201ENST00000332814 NBPF4Q96M43 638 aa22.22■■□□□ 1.15
C11orf88-201ENST00000332814 USHBP1Q8N6Y0 703 aa22.21■■□□□ 1.15
C11orf88-201ENST00000332814 RAPGEF4Q8WZA2 1011 aa22.21■■□□□ 1.15
C11orf88-201ENST00000332814 TATP17735 454 aaPredicted RBP22.17■■□□□ 1.14
C11orf88-201ENST00000332814 EIF4A2Q14240 407 aaKnown RBP22.17■■□□□ 1.14
C11orf88-201ENST00000332814 RGPD2P0DJD1 1756 aa22.17■■□□□ 1.14
C11orf88-201ENST00000332814 BAG6P46379 1132 aa22.16■■□□□ 1.14
C11orf88-201ENST00000332814 RGPD1P0DJD0 1748 aa22.15■■□□□ 1.14
C11orf88-201ENST00000332814 TRIM37O94972 964 aa22.15■■□□□ 1.14
C11orf88-201ENST00000332814 MTHFSP49914 203 aa22.15■■□□□ 1.14
C11orf88-201ENST00000332814 MARCH10Q8NA82 808 aaPredicted RBP22.15■■□□□ 1.14
C11orf88-201ENST00000332814 MEGF6O75095 1541 aa22.15■■□□□ 1.14
C11orf88-201ENST00000332814 DDX10Q13206 875 aaKnown RBP22.14■■□□□ 1.13
C11orf88-201ENST00000332814 EYA1Q99502 592 aa22.14■■□□□ 1.13
C11orf88-201ENST00000332814 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
C11orf88-201ENST00000332814 DDX54Q8TDD1 881 aaKnown RBP22.12■■□□□ 1.13
C11orf88-201ENST00000332814 CFAP53Q96M91 514 aa22.1■■□□□ 1.13
C11orf88-201ENST00000332814 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
C11orf88-201ENST00000332814 BCL9O00512 1426 aa22.09■■□□□ 1.13
C11orf88-201ENST00000332814 NCAPD2Q15021 1401 aa22.09■■□□□ 1.13
C11orf88-201ENST00000332814 DEFB132Q7Z7B7 95 aa22.09■■□□□ 1.13
C11orf88-201ENST00000332814 PCDH11XQ9BZA7 1347 aa22.08■■□□□ 1.13
C11orf88-201ENST00000332814 PCDH11YQ9BZA8 1340 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms