RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 FOXP2O15409 715 aa3.84□□□□□ -1.8
RGPD6-201ENST00000329516 ANP32EQ9BTT0 268 aa3.84□□□□□ -1.8
RGPD6-201ENST00000329516 ZNF831Q5JPB2 1677 aa3.84□□□□□ -1.8
RGPD6-201ENST00000329516 ARAP2Q8WZ64 1704 aa3.83□□□□□ -1.8
RGPD6-201ENST00000329516 CRB1P82279 1406 aa3.83□□□□□ -1.8
RGPD6-201ENST00000329516 CCER1Q8TC90 406 aaPredicted RBP3.83□□□□□ -1.8
RGPD6-201ENST00000329516 ATP1B4Q9UN42 357 aaPredicted RBP3.83□□□□□ -1.8
RGPD6-201ENST00000329516 SMCHD1A6NHR9 2005 aa3.83□□□□□ -1.8
RGPD6-201ENST00000329516 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
RGPD6-201ENST00000329516 SLIT3O75094 1523 aa3.83□□□□□ -1.8
RGPD6-201ENST00000329516 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
RGPD6-201ENST00000329516 FAM135BQ49AJ0 1406 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 ADGRL1O94910 1474 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 IGHDP01880 384 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 TRIM35Q9UPQ4 493 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 RBAK-RBAKDNI3L0D1 243 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 MGAMO43451 1857 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 WDR81Q562E7 1941 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 KIAA0232Q92628 1395 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 AHDC1Q5TGY3 1603 aaPredicted RBP3.82□□□□□ -1.8
RGPD6-201ENST00000329516 TIMELESSQ9UNS1 1208 aa3.82□□□□□ -1.8
RGPD6-201ENST00000329516 AFDNP55196 1824 aaKnown RBP3.82□□□□□ -1.8
RGPD6-201ENST00000329516 SCN7AQ01118 1682 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 AKAP13Q12802 2813 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 FOCADQ5VW36 1801 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 CYP2E1P05181 493 aaPredicted RBP3.81□□□□□ -1.8
RGPD6-201ENST00000329516 ZDHHC9Q9Y397 364 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 PDE4AP27815 886 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 METP08581 1390 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 DLEC1Q9Y238 1755 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 ANK2Q01484 3957 aa3.81□□□□□ -1.8
RGPD6-201ENST00000329516 SNED1Q8TER0 1413 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 LAMB1P07942 1786 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 ZNF853P0CG23 659 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 LRP6O75581 1613 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 COL4A4P53420 1690 aaPredicted RBP3.8□□□□□ -1.8
RGPD6-201ENST00000329516 PARP14Q460N5 1801 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 ARFGEF2Q9Y6D5 1785 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 KDRP35968 1356 aa3.8□□□□□ -1.8
RGPD6-201ENST00000329516 ABCC11Q96J66 1382 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 ABCC6O95255 1503 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 MYT1Q01538 1121 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 LCTP09848 1927 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 USP47Q96K76 1375 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 FANCIQ9NVI1 1328 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 HRNRQ86YZ3 2850 aaPredicted RBP3.79□□□□□ -1.8
RGPD6-201ENST00000329516 NUP155O75694 1391 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 MSH6P52701 1360 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 RLFQ13129 1914 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 ZBED9Q6R2W3 1325 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 CACNA1SQ13698 1873 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 CCER2I3L3R5 266 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 SHISA4Q96DD7 197 aa3.79□□□□□ -1.8
RGPD6-201ENST00000329516 AP5Z1O43299 807 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
RGPD6-201ENST00000329516 KIF15Q9NS87 1388 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 JCADQ9P266 1359 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 EHMT2Q96KQ7 1210 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 KAZALD1Q96I82 304 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 JPH4Q96JJ6 628 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 PCDHB15Q9Y5E8 787 aa3.78□□□□□ -1.8
RGPD6-201ENST00000329516 LOC285556D6RIA3 1793 aa3.78□□□□□ -1.81
RGPD6-201ENST00000329516 ANK3Q12955 4377 aaKnown RBP3.77□□□□□ -1.81
RGPD6-201ENST00000329516 KCPQ6ZWJ8 1503 aa3.77□□□□□ -1.81
RGPD6-201ENST00000329516 MAST2Q6P0Q8 1798 aa3.77□□□□□ -1.81
RGPD6-201ENST00000329516 FAM163AQ96GL9 167 aaPredicted RBP3.77□□□□□ -1.81
RGPD6-201ENST00000329516 FBLN1P23142 703 aa3.77□□□□□ -1.81
RGPD6-201ENST00000329516 FSD2A1L4K1 749 aa3.77□□□□□ -1.81
RGPD6-201ENST00000329516 HNRNPUL2Q1KMD3 747 aaKnown RBP3.77□□□□□ -1.81
RGPD6-201ENST00000329516 POLR3GLQ9BT43 218 aa3.77□□□□□ -1.81
RGPD6-201ENST00000329516 GAS2L3Q86XJ1 694 aa3.77□□□□□ -1.81
RGPD6-201ENST00000329516 LYSTQ99698 3801 aa3.76□□□□□ -1.81
RGPD6-201ENST00000329516 CHAMP1Q96JM3 812 aa3.76□□□□□ -1.81
RGPD6-201ENST00000329516 NCKAP5LQ9HCH0 1330 aa3.76□□□□□ -1.81
RGPD6-201ENST00000329516 RRAGDQ9NQL2 400 aaPredicted RBP3.76□□□□□ -1.81
RGPD6-201ENST00000329516 ATAD2Q6PL18 1390 aa3.76□□□□□ -1.81
RGPD6-201ENST00000329516 AFAP1Q8N556 730 aa3.76□□□□□ -1.81
RGPD6-201ENST00000329516 USP31Q70CQ4 1352 aa3.76□□□□□ -1.81
RGPD6-201ENST00000329516 SLC51AQ86UW1 340 aa3.75□□□□□ -1.81
RGPD6-201ENST00000329516 BRCA1P38398 1863 aaKnown RBP3.75□□□□□ -1.81
RGPD6-201ENST00000329516 ITGBL1O95965 494 aaPredicted RBP3.75□□□□□ -1.81
RGPD6-201ENST00000329516 ADAMTSL1Q8N6G6 1762 aa3.75□□□□□ -1.81
RGPD6-201ENST00000329516 CCDC136Q96JN2 1154 aa3.75□□□□□ -1.81
RGPD6-201ENST00000329516 P3H3Q8IVL6 736 aa3.74□□□□□ -1.81
RGPD6-201ENST00000329516 CNGB1Q14028 1251 aaPredicted RBP3.74□□□□□ -1.81
RGPD6-201ENST00000329516 OLIG1Q8TAK6 271 aa3.74□□□□□ -1.81
RGPD6-201ENST00000329516 PTCH1Q13635 1447 aa3.74□□□□□ -1.81
RGPD6-201ENST00000329516 POLR3AO14802 1390 aaPredicted RBP3.74□□□□□ -1.81
RGPD6-201ENST00000329516 KTN1Q86UP2 1357 aaKnown RBP3.74□□□□□ -1.81
RGPD6-201ENST00000329516 ST20-MTHFSA0A0A6YYL1 179 aa3.74□□□□□ -1.81
RGPD6-201ENST00000329516 TACC3Q9Y6A5 838 aa3.74□□□□□ -1.81
RGPD6-201ENST00000329516 NPHP4O75161 1426 aaPredicted RBP3.74□□□□□ -1.81
RGPD6-201ENST00000329516 PLEKHG5O94827 1062 aa3.74□□□□□ -1.81
RGPD6-201ENST00000329516 DOCK5Q9H7D0 1870 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 ROBO2Q9HCK4 1378 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 TAF6LQ9Y6J9 622 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 DOT1LQ8TEK3 1739 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 ATAD5Q96QE3 1844 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 ONECUT3O60422 494 aaPredicted RBP3.73□□□□□ -1.81
RGPD6-201ENST00000329516 TIAM2Q8IVF5 1701 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms