RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 VAMP4O75379 141 aa20.8■□□□□ 0.92
SSH1-201ENST00000326470 TSPOAP1O95153 1857 aa20.8■□□□□ 0.92
SSH1-201ENST00000326470 GOLGA6L22H0YM25 854 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 HSP90AA2PQ14568 343 aaPredicted RBP20.79■□□□□ 0.92
SSH1-201ENST00000326470 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
SSH1-201ENST00000326470 REREQ9P2R6 1566 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 SIGLEC1Q9BZZ2 1709 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 SSFA2P28290 1259 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 SIRT2Q8IXJ6 389 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 GAS2L2Q8NHY3 880 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 C1orf115Q9H7X2 142 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 STK26Q9P289 416 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 FAM135BQ49AJ0 1406 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 LRRC7Q96NW7 1537 aa20.79■□□□□ 0.92
SSH1-201ENST00000326470 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
SSH1-201ENST00000326470 PRKAR2BP31323 418 aa20.78■□□□□ 0.92
SSH1-201ENST00000326470 CDC45O75419 566 aa20.77■□□□□ 0.92
SSH1-201ENST00000326470 CCDC173Q0VFZ6 552 aa20.77■□□□□ 0.92
SSH1-201ENST00000326470 PTPRMP28827 1452 aa20.77■□□□□ 0.92
SSH1-201ENST00000326470 KLHL40Q2TBA0 621 aa20.77■□□□□ 0.92
SSH1-201ENST00000326470 PPP1R9BQ96SB3 815 aa20.77■□□□□ 0.92
SSH1-201ENST00000326470 ABCC4O15439 1325 aa20.76■□□□□ 0.91
SSH1-201ENST00000326470 HDGFL2Q7Z4V5 671 aaPredicted RBP20.76■□□□□ 0.91
SSH1-201ENST00000326470 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
SSH1-201ENST00000326470 YEATS2Q9ULM3 1422 aa20.76■□□□□ 0.91
SSH1-201ENST00000326470 MINK1Q8N4C8 1332 aaPredicted RBP20.75■□□□□ 0.91
SSH1-201ENST00000326470 BAG4O95429 457 aaKnown RBP20.75■□□□□ 0.91
SSH1-201ENST00000326470 CLTCQ00610 1675 aaKnown RBP20.75■□□□□ 0.91
SSH1-201ENST00000326470 ARHGAP31Q2M1Z3 1444 aa20.75■□□□□ 0.91
SSH1-201ENST00000326470 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
SSH1-201ENST00000326470 NASPP49321 788 aaPredicted RBP20.74■□□□□ 0.91
SSH1-201ENST00000326470 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
SSH1-201ENST00000326470 IDI1Q13907 227 aa20.73■□□□□ 0.91
SSH1-201ENST00000326470 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
SSH1-201ENST00000326470 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
SSH1-201ENST00000326470 DDX49Q9Y6V7 483 aaKnown RBP20.73■□□□□ 0.91
SSH1-201ENST00000326470 GNAI1P63096 354 aa20.73■□□□□ 0.91
SSH1-201ENST00000326470 RABEP1Q15276 862 aa20.73■□□□□ 0.91
SSH1-201ENST00000326470 CFAP44Q96MT7 982 aa20.73■□□□□ 0.91
SSH1-201ENST00000326470 PHACTR3Q96KR7 559 aa20.72■□□□□ 0.91
SSH1-201ENST00000326470 TPM2P07951 284 aa20.72■□□□□ 0.91
SSH1-201ENST00000326470 GSPT1P15170 499 aaKnown RBP20.72■□□□□ 0.91
SSH1-201ENST00000326470 ZNF853P0CG23 659 aa20.71■□□□□ 0.91
SSH1-201ENST00000326470 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
SSH1-201ENST00000326470 DNAJC5Q9H3Z4 198 aa20.71■□□□□ 0.91
SSH1-201ENST00000326470 POLKQ9UBT6 870 aa20.71■□□□□ 0.91
SSH1-201ENST00000326470 ANP32BQ92688 251 aaKnown RBP20.7■□□□□ 0.91
SSH1-201ENST00000326470 PLEKHM2Q8IWE5 1019 aa20.7■□□□□ 0.9
SSH1-201ENST00000326470 KIF13AQ9H1H9 1805 aa20.7■□□□□ 0.9
SSH1-201ENST00000326470 KIF20BQ96Q89 1820 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 NUCB2P80303 420 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 ZSCAN30Q86W11 494 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 SLC52A1Q9NWF4 448 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 YTHDC2Q9H6S0 1430 aaKnown RBP20.69■□□□□ 0.9
SSH1-201ENST00000326470 ZNF445P59923 1031 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 API5Q9BZZ5 524 aaKnown RBP20.69■□□□□ 0.9
SSH1-201ENST00000326470 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
SSH1-201ENST00000326470 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
SSH1-201ENST00000326470 KIF24Q5T7B8 1368 aa20.68■□□□□ 0.9
SSH1-201ENST00000326470 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
SSH1-201ENST00000326470 ELL2O00472 640 aaPredicted RBP20.67■□□□□ 0.9
SSH1-201ENST00000326470 DCTPP1Q9H773 170 aa20.67■□□□□ 0.9
SSH1-201ENST00000326470 ARHGEF40Q8TER5 1519 aa20.67■□□□□ 0.9
SSH1-201ENST00000326470 CYP2E1P05181 493 aaPredicted RBP20.67■□□□□ 0.9
SSH1-201ENST00000326470 HMOX1P09601 288 aa20.67■□□□□ 0.9
SSH1-201ENST00000326470 TTC22Q5TAA0 569 aa20.66■□□□□ 0.9
SSH1-201ENST00000326470 USP26Q9BXU7 913 aa20.66■□□□□ 0.9
SSH1-201ENST00000326470 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
SSH1-201ENST00000326470 FBLN1P23142 703 aa20.66■□□□□ 0.9
SSH1-201ENST00000326470 MCTP1Q6DN14 999 aa20.65■□□□□ 0.9
SSH1-201ENST00000326470 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
SSH1-201ENST00000326470 LMBRD1Q9NUN5 540 aa20.64■□□□□ 0.89
SSH1-201ENST00000326470 AGLP35573 1532 aa20.64■□□□□ 0.89
SSH1-201ENST00000326470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.64■□□□□ 0.89
SSH1-201ENST00000326470 C8orf58Q8NAV2 365 aa20.64■□□□□ 0.89
SSH1-201ENST00000326470 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
SSH1-201ENST00000326470 KIAA1211Q6ZU35 1233 aa20.63■□□□□ 0.89
SSH1-201ENST00000326470 CWC22Q9HCG8 908 aaKnown RBP20.63■□□□□ 0.89
SSH1-201ENST00000326470 OFD1O75665 1012 aa20.63■□□□□ 0.89
SSH1-201ENST00000326470 HS1BP3Q53T59 392 aa20.63■□□□□ 0.89
SSH1-201ENST00000326470 IL13P35225 146 aa20.62■□□□□ 0.89
SSH1-201ENST00000326470 LMOD3Q0VAK6 560 aa20.62■□□□□ 0.89
SSH1-201ENST00000326470 ZSCAN23Q3MJ62 389 aa20.62■□□□□ 0.89
SSH1-201ENST00000326470 KNDC1Q76NI1 1749 aa20.62■□□□□ 0.89
SSH1-201ENST00000326470 MSNP26038 577 aaKnown RBP20.62■□□□□ 0.89
SSH1-201ENST00000326470 CAVIN1Q6NZI2 390 aaKnown RBP20.62■□□□□ 0.89
SSH1-201ENST00000326470 TMEM131LA2VDJ0 1609 aa20.61■□□□□ 0.89
SSH1-201ENST00000326470 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
SSH1-201ENST00000326470 ATP7BP35670 1465 aa20.6■□□□□ 0.89
SSH1-201ENST00000326470 C16orf71Q8IYS4 520 aaPredicted RBP20.6■□□□□ 0.89
SSH1-201ENST00000326470 AK9Q5TCS8 1911 aa20.6■□□□□ 0.89
SSH1-201ENST00000326470 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
SSH1-201ENST00000326470 ANKRD44Q8N8A2 993 aa20.59■□□□□ 0.89
SSH1-201ENST00000326470 NCLP19338 710 aaKnown RBP20.59■□□□□ 0.89
SSH1-201ENST00000326470 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
SSH1-201ENST00000326470 PKP1Q13835 747 aa20.59■□□□□ 0.89
SSH1-201ENST00000326470 EMILIN1Q9Y6C2 1016 aa20.59■□□□□ 0.89
SSH1-201ENST00000326470 MAP2P11137 1827 aaKnown RBP20.58■□□□□ 0.89
SSH1-201ENST00000326470 TERF1P54274 439 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms