RNA–Protein interactions for RNA: ENST00000326407.10

ITM2C-201, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-201ENST00000326407 KIF1AQ12756 1690 aa21.41■■□□□ 1.02
ITM2C-201ENST00000326407 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
ITM2C-201ENST00000326407 AAMPQ13685 434 aa21.41■■□□□ 1.02
ITM2C-201ENST00000326407 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
ITM2C-201ENST00000326407 COG6Q9Y2V7 657 aa21.41■■□□□ 1.02
ITM2C-201ENST00000326407 CPSF1Q10570 1443 aaKnown RBP21.4■■□□□ 1.02
ITM2C-201ENST00000326407 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
ITM2C-201ENST00000326407 MAPK8IP3Q9UPT6 1336 aa21.4■■□□□ 1.02
ITM2C-201ENST00000326407 MON2Q7Z3U7 1717 aa21.4■■□□□ 1.02
ITM2C-201ENST00000326407 ROBO1Q9Y6N7 1651 aa21.39■■□□□ 1.02
ITM2C-201ENST00000326407 PIP4K2BP78356 416 aa21.39■■□□□ 1.02
ITM2C-201ENST00000326407 AKAP12Q02952 1782 aa21.39■■□□□ 1.01
ITM2C-201ENST00000326407 FOXO3O43524 673 aa21.39■■□□□ 1.01
ITM2C-201ENST00000326407 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
ITM2C-201ENST00000326407 RGS3P49796 1198 aa21.39■■□□□ 1.01
ITM2C-201ENST00000326407 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.01
ITM2C-201ENST00000326407 ZNF692Q9BU19 519 aaPredicted RBP21.39■■□□□ 1.01
ITM2C-201ENST00000326407 IGHDP01880 384 aa21.38■■□□□ 1.01
ITM2C-201ENST00000326407 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
ITM2C-201ENST00000326407 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
ITM2C-201ENST00000326407 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
ITM2C-201ENST00000326407 CT47B1P0C2W7 299 aaPredicted RBP21.35■■□□□ 1.01
ITM2C-201ENST00000326407 RTL5Q5HYW3 569 aaPredicted RBP21.35■■□□□ 1.01
ITM2C-201ENST00000326407 PPM1GO15355 546 aaPredicted RBP21.35■■□□□ 1.01
ITM2C-201ENST00000326407 PSME1Q06323 249 aa21.35■■□□□ 1.01
ITM2C-201ENST00000326407 PNNQ9H307 717 aaKnown RBP21.35■■□□□ 1.01
ITM2C-201ENST00000326407 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
ITM2C-201ENST00000326407 DDX17Q92841 729 aaKnown RBP21.34■■□□□ 1.01
ITM2C-201ENST00000326407 USP6P35125 1406 aa21.34■■□□□ 1.01
ITM2C-201ENST00000326407 NHSL1Q5SYE7 1610 aa21.34■■□□□ 1.01
ITM2C-201ENST00000326407 DEKP35659 375 aaKnown RBP21.33■■□□□ 1.01
ITM2C-201ENST00000326407 TMPOP42166 694 aaKnown RBP21.33■■□□□ 1.01
ITM2C-201ENST00000326407 HSPA1LP34931 641 aa21.32■■□□□ 1
ITM2C-201ENST00000326407 KRT28Q7Z3Y7 464 aa21.32■■□□□ 1
ITM2C-201ENST00000326407 NME9Q86XW9 330 aa21.32■■□□□ 1
ITM2C-201ENST00000326407 AHDC1Q5TGY3 1603 aaPredicted RBP21.32■■□□□ 1
ITM2C-201ENST00000326407 SSH2Q76I76 1423 aa21.32■■□□□ 1
ITM2C-201ENST00000326407 SOS2Q07890 1332 aaPredicted RBP21.32■■□□□ 1
ITM2C-201ENST00000326407 RLBP1P12271 317 aa21.32■■□□□ 1
ITM2C-201ENST00000326407 PXDNQ92626 1479 aa21.31■■□□□ 1
ITM2C-201ENST00000326407 BCL2L13Q9BXK5 485 aa21.31■■□□□ 1
ITM2C-201ENST00000326407 POLKQ9UBT6 870 aa21.31■■□□□ 1
ITM2C-201ENST00000326407 IL16Q14005 1332 aa21.31■■□□□ 1
ITM2C-201ENST00000326407 XPCQ01831 940 aaPredicted RBP21.3■■□□□ 1
ITM2C-201ENST00000326407 MED1Q15648 1581 aaPredicted RBP21.3■■□□□ 1
ITM2C-201ENST00000326407 TRIM35Q9UPQ4 493 aa21.3■■□□□ 1
ITM2C-201ENST00000326407 TNNQ9UQP3 1299 aa21.3■■□□□ 1
ITM2C-201ENST00000326407 FBLN1P23142 703 aa21.29■■□□□ 1
ITM2C-201ENST00000326407 COG3Q96JB2 828 aa21.29■■□□□ 1
ITM2C-201ENST00000326407 NEFMP07197 916 aa21.28■■□□□ 1
ITM2C-201ENST00000326407 SBNO1A3KN83 1393 aa21.28■■□□□ 1
ITM2C-201ENST00000326407 TTC21BQ7Z4L5 1316 aa21.28■■□□□ 1
ITM2C-201ENST00000326407 ZRANB1Q9UGI0 708 aa21.28■■□□□ 1
ITM2C-201ENST00000326407 LAS1LQ9Y4W2 734 aaKnown RBP21.28■■□□□ 1
ITM2C-201ENST00000326407 NRKQ7Z2Y5 1582 aa21.27■■□□□ 1
ITM2C-201ENST00000326407 TSR2Q969E8 191 aaKnown RBP21.27■■□□□ 1
ITM2C-201ENST00000326407 CDK12Q9NYV4 1490 aaPredicted RBP21.27■□□□□ 0.99
ITM2C-201ENST00000326407 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
ITM2C-201ENST00000326407 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
ITM2C-201ENST00000326407 FCHSD2O94868 740 aa21.26■□□□□ 0.99
ITM2C-201ENST00000326407 RIPK4P57078 832 aa21.26■□□□□ 0.99
ITM2C-201ENST00000326407 MVPQ14764 893 aaKnown RBP21.26■□□□□ 0.99
ITM2C-201ENST00000326407 PCDHB15Q9Y5E8 787 aa21.26■□□□□ 0.99
ITM2C-201ENST00000326407 EMILIN1Q9Y6C2 1016 aa21.26■□□□□ 0.99
ITM2C-201ENST00000326407 TTC21AQ8NDW8 1320 aa21.25■□□□□ 0.99
ITM2C-201ENST00000326407 EXOSC9Q06265 439 aaKnown RBP21.25■□□□□ 0.99
ITM2C-201ENST00000326407 AATKQ6ZMQ8 1374 aa21.25■□□□□ 0.99
ITM2C-201ENST00000326407 USP35Q9P2H5 1018 aa21.24■□□□□ 0.99
ITM2C-201ENST00000326407 SPATA31A3Q5VYP0 1347 aa21.24■□□□□ 0.99
ITM2C-201ENST00000326407 PRKAR2BP31323 418 aa21.24■□□□□ 0.99
ITM2C-201ENST00000326407 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
ITM2C-201ENST00000326407 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
ITM2C-201ENST00000326407 DZIP1LQ8IYY4 767 aaKnown RBP21.23■□□□□ 0.99
ITM2C-201ENST00000326407 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
ITM2C-201ENST00000326407 COL16A1Q07092 1604 aaPredicted RBP21.23■□□□□ 0.99
ITM2C-201ENST00000326407 LRRC59Q96AG4 307 aaKnown RBP21.22■□□□□ 0.99
ITM2C-201ENST00000326407 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
ITM2C-201ENST00000326407 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
ITM2C-201ENST00000326407 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
ITM2C-201ENST00000326407 TNS3Q68CZ2 1445 aa21.22■□□□□ 0.99
ITM2C-201ENST00000326407 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
ITM2C-201ENST00000326407 HMOX1P09601 288 aa21.2■□□□□ 0.98
ITM2C-201ENST00000326407 ABTB2Q8N961 1025 aa21.2■□□□□ 0.98
ITM2C-201ENST00000326407 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
ITM2C-201ENST00000326407 ALS2Q96Q42 1657 aa21.2■□□□□ 0.98
ITM2C-201ENST00000326407 RRS1Q15050 365 aaKnown RBP21.2■□□□□ 0.98
ITM2C-201ENST00000326407 ARHGEF10O15013 1369 aa21.19■□□□□ 0.98
ITM2C-201ENST00000326407 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
ITM2C-201ENST00000326407 IL13P35225 146 aa21.18■□□□□ 0.98
ITM2C-201ENST00000326407 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
ITM2C-201ENST00000326407 TRIM27P14373 513 aa21.18■□□□□ 0.98
ITM2C-201ENST00000326407 PDZRN3Q9UPQ7 1066 aa21.18■□□□□ 0.98
ITM2C-201ENST00000326407 USP31Q70CQ4 1352 aa21.17■□□□□ 0.98
ITM2C-201ENST00000326407 LMOD2Q6P5Q4 547 aa21.17■□□□□ 0.98
ITM2C-201ENST00000326407 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
ITM2C-201ENST00000326407 USP19O94966 1318 aa21.16■□□□□ 0.98
ITM2C-201ENST00000326407 SLC4A3P48751 1232 aa21.15■□□□□ 0.98
ITM2C-201ENST00000326407 NFE2L2Q16236 605 aa21.15■□□□□ 0.98
ITM2C-201ENST00000326407 KIF16BQ96L93 1317 aa21.15■□□□□ 0.98
ITM2C-201ENST00000326407 DDX19BQ9UMR2 479 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms