RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 EXOC6BQ9Y2D4 811 aa29.06■■■□□ 2.24
PACS2-201ENST00000325438 PLEKHM2Q8IWE5 1019 aa29.06■■■□□ 2.24
PACS2-201ENST00000325438 E9PCH4 1651 aa29.06■■■□□ 2.24
PACS2-201ENST00000325438 GOLGA6L4A6NEF3 574 aa29.05■■■□□ 2.24
PACS2-201ENST00000325438 ZNF445P59923 1031 aa29.05■■■□□ 2.24
PACS2-201ENST00000325438 GSPT1P15170 499 aaKnown RBP29.05■■■□□ 2.24
PACS2-201ENST00000325438 ZNF771Q7L3S4 317 aaPredicted RBP29.05■■■□□ 2.24
PACS2-201ENST00000325438 KCNJ4P48050 445 aa29.04■■■□□ 2.24
PACS2-201ENST00000325438 TTC22Q5TAA0 569 aa29.04■■■□□ 2.24
PACS2-201ENST00000325438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.04■■■□□ 2.24
PACS2-201ENST00000325438 PBRM1Q86U86 1689 aa29.04■■■□□ 2.24
PACS2-201ENST00000325438 ALDH1L2Q3SY69 923 aa29.04■■■□□ 2.24
PACS2-201ENST00000325438 MAP4K4O95819 1239 aaPredicted RBP29.04■■■□□ 2.24
PACS2-201ENST00000325438 NOS1P29475 1434 aa29.04■■■□□ 2.24
PACS2-201ENST00000325438 TARBP1Q13395 1621 aaKnown RBP29.03■■■□□ 2.24
PACS2-201ENST00000325438 ABCC10Q5T3U5 1492 aa29.03■■■□□ 2.24
PACS2-201ENST00000325438 PPP4R3BQ5MIZ7 849 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 PHACTR3Q96KR7 559 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 PRAM1Q96QH2 718 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 KRT24Q2M2I5 525 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 USP26Q9BXU7 913 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 TAOK2Q9UL54 1235 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 HCLS1P14317 486 aaPredicted RBP29.02■■■□□ 2.24
PACS2-201ENST00000325438 TMX3Q96JJ7 454 aa29.02■■■□□ 2.24
PACS2-201ENST00000325438 VGFO15240 615 aaPredicted RBP29.01■■■□□ 2.23
PACS2-201ENST00000325438 C8orf58Q8NAV2 365 aa29.01■■■□□ 2.23
PACS2-201ENST00000325438 OS9Q13438 667 aaPredicted RBP29■■■□□ 2.23
PACS2-201ENST00000325438 MIS18AQ9NYP9 233 aa29■■■□□ 2.23
PACS2-201ENST00000325438 MBIPQ9NS73 344 aa29■■■□□ 2.23
PACS2-201ENST00000325438 VPS37CA5D8V6 355 aaPredicted RBP28.99■■■□□ 2.23
PACS2-201ENST00000325438 KIF3AQ9Y496 699 aa28.99■■■□□ 2.23
PACS2-201ENST00000325438 VAMP4O75379 141 aa28.99■■■□□ 2.23
PACS2-201ENST00000325438 MRPL50Q8N5N7 158 aaKnown RBP28.98■■■□□ 2.23
PACS2-201ENST00000325438 ABCC11Q96J66 1382 aa28.98■■■□□ 2.23
PACS2-201ENST00000325438 TRAPPC8Q9Y2L5 1435 aa28.97■■■□□ 2.23
PACS2-201ENST00000325438 ADCY5O95622 1261 aa28.97■■■□□ 2.23
PACS2-201ENST00000325438 FYB1O15117 783 aa28.97■■■□□ 2.23
PACS2-201ENST00000325438 CDK11BP21127 795 aaKnown RBP28.97■■■□□ 2.23
PACS2-201ENST00000325438 MAPK8IP2Q13387 824 aaPredicted RBP28.97■■■□□ 2.23
PACS2-201ENST00000325438 RRS1Q15050 365 aaKnown RBP28.97■■■□□ 2.23
PACS2-201ENST00000325438 EMILIN1Q9Y6C2 1016 aa28.97■■■□□ 2.23
PACS2-201ENST00000325438 F6X3S4 739 aa28.96■■■□□ 2.23
PACS2-201ENST00000325438 FCHSD2O94868 740 aa28.96■■■□□ 2.23
PACS2-201ENST00000325438 NFE2L2Q16236 605 aa28.96■■■□□ 2.23
PACS2-201ENST00000325438 ERVK-7P63135 1459 aa28.96■■■□□ 2.23
PACS2-201ENST00000325438 SIRT2Q8IXJ6 389 aa28.95■■■□□ 2.23
PACS2-201ENST00000325438 DDX54Q8TDD1 881 aaKnown RBP28.95■■■□□ 2.23
PACS2-201ENST00000325438 HMGN5P82970 282 aaKnown RBP28.95■■■□□ 2.22
PACS2-201ENST00000325438 SLC4A2P04920 1241 aa28.95■■■□□ 2.22
PACS2-201ENST00000325438 IFT57Q9NWB7 429 aa28.95■■■□□ 2.22
PACS2-201ENST00000325438 PTPRTO14522 1441 aa28.94■■■□□ 2.22
PACS2-201ENST00000325438 NOLC1Q14978 699 aaKnown RBP eCLIP28.94■■■□□ 2.22
PACS2-201ENST00000325438 HS1BP3Q53T59 392 aa28.94■■■□□ 2.22
PACS2-201ENST00000325438 ADCY10Q96PN6 1610 aa28.93■■■□□ 2.22
PACS2-201ENST00000325438 ZMYM3Q14202 1370 aa28.93■■■□□ 2.22
PACS2-201ENST00000325438 DDIT3P35638 169 aa28.93■■■□□ 2.22
PACS2-201ENST00000325438 PDCL2Q8N4E4 241 aa28.93■■■□□ 2.22
PACS2-201ENST00000325438 MEIS3Q99687 375 aa28.93■■■□□ 2.22
PACS2-201ENST00000325438 ZNF500O60304 480 aaPredicted RBP28.93■■■□□ 2.22
PACS2-201ENST00000325438 GADD45BO75293 160 aaPredicted RBP28.93■■■□□ 2.22
PACS2-201ENST00000325438 LMOD3Q0VAK6 560 aa28.93■■■□□ 2.22
PACS2-201ENST00000325438 PHF23Q9BUL5 403 aaPredicted RBP28.93■■■□□ 2.22
PACS2-201ENST00000325438 IL1RAPL2Q9NP60 686 aa28.92■■■□□ 2.22
PACS2-201ENST00000325438 NPM1P06748 294 aaKnown RBP eCLIP28.92■■■□□ 2.22
PACS2-201ENST00000325438 NPHP1O15259 732 aa28.91■■■□□ 2.22
PACS2-201ENST00000325438 RTF1Q92541 710 aaKnown RBP28.91■■■□□ 2.22
PACS2-201ENST00000325438 PPIP5K1Q6PFW1 1433 aa28.91■■■□□ 2.22
PACS2-201ENST00000325438 SMC3Q9UQE7 1217 aa28.91■■■□□ 2.22
PACS2-201ENST00000325438 USP48Q86UV5 1035 aa28.9■■■□□ 2.22
PACS2-201ENST00000325438 C14orf93Q9H972 538 aaKnown RBP28.9■■■□□ 2.22
PACS2-201ENST00000325438 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
PACS2-201ENST00000325438 MCM10Q7L590 875 aa28.9■■■□□ 2.22
PACS2-201ENST00000325438 GIMAP6Q6P9H5 292 aa28.89■■■□□ 2.22
PACS2-201ENST00000325438 SYNMO15061 1565 aa28.89■■■□□ 2.22
PACS2-201ENST00000325438 GOLGA6L6A8MZA4 724 aa28.89■■■□□ 2.22
PACS2-201ENST00000325438 MCM5P33992 734 aa28.89■■■□□ 2.22
PACS2-201ENST00000325438 STK31Q9BXU1 1019 aa28.88■■■□□ 2.21
PACS2-201ENST00000325438 FKBP5Q13451 457 aaPredicted RBP28.87■■■□□ 2.21
PACS2-201ENST00000325438 CCDC94Q9BW85 323 aaPredicted RBP28.87■■■□□ 2.21
PACS2-201ENST00000325438 CDK19Q9BWU1 502 aa28.87■■■□□ 2.21
PACS2-201ENST00000325438 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
PACS2-201ENST00000325438 IL16Q14005 1332 aa28.86■■■□□ 2.21
PACS2-201ENST00000325438 DCTPP1Q9H773 170 aa28.86■■■□□ 2.21
PACS2-201ENST00000325438 DIAPH3Q9NSV4 1193 aa28.86■■■□□ 2.21
PACS2-201ENST00000325438 CDC42BPAQ5VT25 1732 aa28.86■■■□□ 2.21
PACS2-201ENST00000325438 CAMK4Q16566 473 aa28.85■■■□□ 2.21
PACS2-201ENST00000325438 FBXW7Q969H0 707 aa28.85■■■□□ 2.21
PACS2-201ENST00000325438 PLEKHF1Q96S99 279 aa28.85■■■□□ 2.21
PACS2-201ENST00000325438 CNPY2Q9Y2B0 182 aa28.85■■■□□ 2.21
PACS2-201ENST00000325438 AK9Q5TCS8 1911 aa28.85■■■□□ 2.21
PACS2-201ENST00000325438 DUOX2Q9NRD8 1548 aa28.85■■■□□ 2.21
PACS2-201ENST00000325438 HAP1P54257 671 aaPredicted RBP28.85■■■□□ 2.21
PACS2-201ENST00000325438 FERMT3Q86UX7 667 aa28.84■■■□□ 2.21
PACS2-201ENST00000325438 ZNF428Q96B54 188 aa28.84■■■□□ 2.21
PACS2-201ENST00000325438 NAP1L2Q9ULW6 460 aaPredicted RBP28.84■■■□□ 2.21
PACS2-201ENST00000325438 SAMD9LQ8IVG5 1584 aa28.84■■■□□ 2.21
PACS2-201ENST00000325438 WDR33Q9C0J8 1336 aaKnown RBP28.84■■■□□ 2.21
PACS2-201ENST00000325438 SULT6B1Q6IMI4 303 aa28.83■■■□□ 2.21
PACS2-201ENST00000325438 RPAP2Q8IXW5 612 aaPredicted RBP28.83■■■□□ 2.21
PACS2-201ENST00000325438 SMAP1Q8IYB5 467 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms