RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 COL14A1Q05707 1796 aaKnown RBP24.19■■□□□ 1.46
SYNE4-201ENST00000324444 ABTB2Q8N961 1025 aa24.18■■□□□ 1.46
SYNE4-201ENST00000324444 NRAPQ86VF7 1730 aa24.17■■□□□ 1.46
SYNE4-201ENST00000324444 CFAP53Q96M91 514 aa24.16■■□□□ 1.46
SYNE4-201ENST00000324444 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
SYNE4-201ENST00000324444 PHRF1Q9P1Y6 1649 aaKnown RBP24.16■■□□□ 1.46
SYNE4-201ENST00000324444 KIAA0232Q92628 1395 aa24.16■■□□□ 1.46
SYNE4-201ENST00000324444 SLIT3O75094 1523 aa24.16■■□□□ 1.46
SYNE4-201ENST00000324444 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
SYNE4-201ENST00000324444 SEPT12Q8IYM1 358 aa24.15■■□□□ 1.46
SYNE4-201ENST00000324444 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
SYNE4-201ENST00000324444 CCDC184Q52MB2 194 aa24.14■■□□□ 1.45
SYNE4-201ENST00000324444 PNISRQ8TF01 805 aaKnown RBP24.14■■□□□ 1.45
SYNE4-201ENST00000324444 ONECUT3O60422 494 aaPredicted RBP24.12■■□□□ 1.45
SYNE4-201ENST00000324444 USP19O94966 1318 aa24.12■■□□□ 1.45
SYNE4-201ENST00000324444 INSRP06213 1382 aa24.12■■□□□ 1.45
SYNE4-201ENST00000324444 AATKQ6ZMQ8 1374 aa24.12■■□□□ 1.45
SYNE4-201ENST00000324444 NFAT5O94916 1531 aa24.11■■□□□ 1.45
SYNE4-201ENST00000324444 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
SYNE4-201ENST00000324444 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
SYNE4-201ENST00000324444 A0A0G2JS52 829 aa24.1■■□□□ 1.45
SYNE4-201ENST00000324444 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
SYNE4-201ENST00000324444 NLRP6P59044 892 aa24.1■■□□□ 1.45
SYNE4-201ENST00000324444 MYT1Q01538 1121 aa24.1■■□□□ 1.45
SYNE4-201ENST00000324444 YTHDC1Q96MU7 727 aaKnown RBP24.1■■□□□ 1.45
SYNE4-201ENST00000324444 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
SYNE4-201ENST00000324444 BRWD3Q6RI45 1802 aa24.1■■□□□ 1.45
SYNE4-201ENST00000324444 TNNT2P45379 298 aaPredicted RBP24.09■■□□□ 1.45
SYNE4-201ENST00000324444 FAM98CQ17RN3 349 aaKnown RBP24.09■■□□□ 1.45
SYNE4-201ENST00000324444 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
SYNE4-201ENST00000324444 SPATA31A5Q5VU36 1347 aa24.07■■□□□ 1.44
SYNE4-201ENST00000324444 SPATA31A7Q8IWB4 1347 aa24.07■■□□□ 1.44
SYNE4-201ENST00000324444 MTHFSP49914 203 aa24.07■■□□□ 1.44
SYNE4-201ENST00000324444 STRN4Q9NRL3 753 aa24.06■■□□□ 1.44
SYNE4-201ENST00000324444 GCP02774 474 aa24.05■■□□□ 1.44
SYNE4-201ENST00000324444 KRT27Q7Z3Y8 459 aa24.05■■□□□ 1.44
SYNE4-201ENST00000324444 LTN1O94822 1766 aa24.05■■□□□ 1.44
SYNE4-201ENST00000324444 CCDC125Q86Z20 511 aa24.04■■□□□ 1.44
SYNE4-201ENST00000324444 CPDO75976 1380 aa24.04■■□□□ 1.44
SYNE4-201ENST00000324444 PEAK1Q9H792 1746 aa24.04■■□□□ 1.44
SYNE4-201ENST00000324444 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
SYNE4-201ENST00000324444 EVA1CP58658 441 aa24.02■■□□□ 1.44
SYNE4-201ENST00000324444 SPATA31A1Q5TZJ5 1347 aa24.01■■□□□ 1.43
SYNE4-201ENST00000324444 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
SYNE4-201ENST00000324444 CAMTA1Q9Y6Y1 1673 aa24■■□□□ 1.43
SYNE4-201ENST00000324444 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
SYNE4-201ENST00000324444 FBLN1P23142 703 aa24■■□□□ 1.43
SYNE4-201ENST00000324444 KCNH5Q8NCM2 988 aa24■■□□□ 1.43
SYNE4-201ENST00000324444 POLKQ9UBT6 870 aa24■■□□□ 1.43
SYNE4-201ENST00000324444 ZBTB7CA1YPR0 619 aa23.99■■□□□ 1.43
SYNE4-201ENST00000324444 LMO7Q8WWI1 1683 aa23.98■■□□□ 1.43
SYNE4-201ENST00000324444 USP35Q9P2H5 1018 aa23.98■■□□□ 1.43
SYNE4-201ENST00000324444 KIF24Q5T7B8 1368 aa23.97■■□□□ 1.43
SYNE4-201ENST00000324444 THSD7AQ9UPZ6 1657 aa23.97■■□□□ 1.43
SYNE4-201ENST00000324444 HNRNPUQ00839 825 aaKnown RBP eCLIP23.97■■□□□ 1.43
SYNE4-201ENST00000324444 MAP3K19Q56UN5 1328 aa23.97■■□□□ 1.43
SYNE4-201ENST00000324444 ABCC6O95255 1503 aa23.96■■□□□ 1.43
SYNE4-201ENST00000324444 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
SYNE4-201ENST00000324444 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
SYNE4-201ENST00000324444 EMILIN1Q9Y6C2 1016 aa23.96■■□□□ 1.43
SYNE4-201ENST00000324444 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
SYNE4-201ENST00000324444 RTL1A6NKG5 1358 aa23.95■■□□□ 1.42
SYNE4-201ENST00000324444 COL18A1P39060 1754 aa23.95■■□□□ 1.42
SYNE4-201ENST00000324444 DIAPH1O60610 1272 aaKnown RBP23.94■■□□□ 1.42
SYNE4-201ENST00000324444 SF3B2Q13435 895 aaKnown RBP23.94■■□□□ 1.42
SYNE4-201ENST00000324444 SOX12O15370 315 aa23.93■■□□□ 1.42
SYNE4-201ENST00000324444 FAM182BQ5T319 152 aa23.93■■□□□ 1.42
SYNE4-201ENST00000324444 COL5A2P05997 1499 aaPredicted RBP23.93■■□□□ 1.42
SYNE4-201ENST00000324444 ARHGEF25Q86VW2 580 aa23.92■■□□□ 1.42
SYNE4-201ENST00000324444 ADAMTS8Q9UP79 889 aa23.92■■□□□ 1.42
SYNE4-201ENST00000324444 FLT4P35916 1363 aa23.92■■□□□ 1.42
SYNE4-201ENST00000324444 PPM1GO15355 546 aaPredicted RBP23.91■■□□□ 1.42
SYNE4-201ENST00000324444 DEFB132Q7Z7B7 95 aa23.91■■□□□ 1.42
SYNE4-201ENST00000324444 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
SYNE4-201ENST00000324444 BARGINQ6ZT62 677 aa23.91■■□□□ 1.42
SYNE4-201ENST00000324444 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
SYNE4-201ENST00000324444 ZBED9Q6R2W3 1325 aa23.89■■□□□ 1.41
SYNE4-201ENST00000324444 RGPD5Q99666 1765 aa23.87■■□□□ 1.41
SYNE4-201ENST00000324444 RGPD1P0DJD0 1748 aa23.87■■□□□ 1.41
SYNE4-201ENST00000324444 HOXC9P31274 260 aa23.87■■□□□ 1.41
SYNE4-201ENST00000324444 AMPHP49418 695 aa23.87■■□□□ 1.41
SYNE4-201ENST00000324444 CRB1P82279 1406 aa23.86■■□□□ 1.41
SYNE4-201ENST00000324444 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
SYNE4-201ENST00000324444 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
SYNE4-201ENST00000324444 AXIN2Q9Y2T1 843 aa23.86■■□□□ 1.41
SYNE4-201ENST00000324444 THRAP3Q9Y2W1 955 aaKnown RBP23.86■■□□□ 1.41
SYNE4-201ENST00000324444 IP6K1Q92551 441 aa23.85■■□□□ 1.41
SYNE4-201ENST00000324444 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
SYNE4-201ENST00000324444 PDE3BQ13370 1112 aa23.84■■□□□ 1.41
SYNE4-201ENST00000324444 SRCAPQ6ZRS2 3230 aa23.84■■□□□ 1.41
SYNE4-201ENST00000324444 NEFMP07197 916 aa23.83■■□□□ 1.41
SYNE4-201ENST00000324444 BAG6P46379 1132 aa23.83■■□□□ 1.41
SYNE4-201ENST00000324444 HSP90AB2PQ58FF8 381 aa23.83■■□□□ 1.41
SYNE4-201ENST00000324444 TOM1L2Q6ZVM7 507 aa23.83■■□□□ 1.41
SYNE4-201ENST00000324444 FAM196AQ6ZSG2 479 aa23.82■■□□□ 1.4
SYNE4-201ENST00000324444 RUNDC1Q96C34 613 aa23.82■■□□□ 1.4
SYNE4-201ENST00000324444 FCHSD2O94868 740 aa23.81■■□□□ 1.4
SYNE4-201ENST00000324444 NCBP3Q53F19 620 aaKnown RBP23.81■■□□□ 1.4
SYNE4-201ENST00000324444 FAM208AQ9UK61 1670 aaKnown RBP23.81■■□□□ 1.4
SYNE4-201ENST00000324444 WDR17Q8IZU2 1322 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms