RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 SPATA32Q96LK8 384 aa11.1□□□□□ -0.63
ZKSCAN1-201ENST00000324306 KRT32Q14532 448 aa11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 UVSSAQ2YD98 709 aa11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 G3V3G9 751 aa11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 CCDC91Q7Z6B0 441 aa11.09□□□□□ -0.63
ZKSCAN1-201ENST00000324306 FSD1Q9BTV5 496 aa11.08□□□□□ -0.63
ZKSCAN1-201ENST00000324306 MVPQ14764 893 aaKnown RBP11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ARHGAP29Q52LW3 1261 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 PLCD4Q9BRC7 762 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 KIF5CO60282 957 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CLCN1P35523 988 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CCAR1Q8IX12 1150 aaKnown RBP11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 GGT6Q6P531 493 aa11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CLASRPQ8N2M8 674 aaKnown RBP11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ZNF397Q8NF99 534 aaPredicted RBP11.08□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CASQ1P31415 396 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ME1P48163 572 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 WASF1Q92558 559 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CCDC27Q2M243 656 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 KRT222Q8N1A0 295 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 DAPK1P53355 1430 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CCDC171Q6TFL3 1326 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SPATA24Q86W54 205 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ANKRD50Q9ULJ7 1429 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 KIF3BO15066 747 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 GNAI2P04899 355 aa11.07□□□□□ -0.64
ZKSCAN1-201ENST00000324306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.06□□□□□ -0.648e-8■■■■■ 63.1
ZKSCAN1-201ENST00000324306 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SH2B1Q9NRF2 756 aaPredicted RBP11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 BMS1Q14692 1282 aaKnown RBP11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CCDC141Q6ZP82 1450 aa11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CHD1LQ86WJ1 897 aa11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SYCE3A1L190 88 aa11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 VPS37DQ86XT2 251 aa11.06□□□□□ -0.64
ZKSCAN1-201ENST00000324306 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.642e-8■□□□□ 8.2
ZKSCAN1-201ENST00000324306 CEP131Q9UPN4 1083 aa11.05□□□□□ -0.64
ZKSCAN1-201ENST00000324306 GCOM1H8Y6P7 765 aaPredicted RBP11.05□□□□□ -0.64
ZKSCAN1-201ENST00000324306 MYZAPP0CAP1 466 aa11.05□□□□□ -0.64
ZKSCAN1-201ENST00000324306 PPP4R3BQ5MIZ7 849 aa11.05□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ANO10Q9NW15 660 aa11.05□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SMC1AQ14683 1233 aaKnown RBP11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 LARP1BQ659C4 914 aaKnown RBP11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 TAF4BQ92750 862 aa11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CCDC150Q8NCX0 1101 aa11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.04□□□□□ -0.644e-6■■□□□ 13.2
ZKSCAN1-201ENST00000324306 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ERBINQ96RT1 1412 aa11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
ZKSCAN1-201ENST00000324306 NF2P35240 595 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SPECC1LQ69YQ0 1117 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 GTF2E1P29083 439 aaPredicted RBP11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 PPP2R1AP30153 589 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 SRRTQ9BXP5 876 aaKnown RBP11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ADAMTS8Q9UP79 889 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 KIAA1328Q86T90 577 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 TRAK1Q9UPV9 953 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ZMYND15Q9H091 742 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CENPHQ9H3R5 247 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 HNRNPMP52272 730 aaKnown RBP eCLIP11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ATAD2Q6PL18 1390 aa11.02□□□□□ -0.64
ZKSCAN1-201ENST00000324306 C11orf95C9JLR9 678 aaPredicted RBP11.02□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CBX1P83916 185 aa11.02□□□□□ -0.64
ZKSCAN1-201ENST00000324306 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.64
ZKSCAN1-201ENST00000324306 MAP3K1Q13233 1512 aa11.02□□□□□ -0.64
ZKSCAN1-201ENST00000324306 ATF7IPQ6VMQ6 1270 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 DDX12PQ92771 950 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 STX1AQ16623 288 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 FMNL2Q96PY5 1086 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 FEZ1Q99689 392 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 PDRG1Q9NUG6 133 aa11.02□□□□□ -0.65
ZKSCAN1-201ENST00000324306 ABCC11Q96J66 1382 aa11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 DESP17661 470 aa11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 NAA15Q9BXJ9 866 aaKnown RBP11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 DDX19AQ9NUU7 478 aaKnown RBP11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 GTF2A1P52655 376 aaPredicted RBP11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 FAM193AP78312 1265 aa11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 SPA17Q15506 151 aa11.01□□□□□ -0.65
ZKSCAN1-201ENST00000324306 CCDC57Q2TAC2 916 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms