RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 RGS3P49796 1198 aa27.85■■■□□ 2.05
SPHK1-201ENST00000323374 LMOD3Q0VAK6 560 aa27.85■■■□□ 2.05
SPHK1-201ENST00000323374 TTC21AQ8NDW8 1320 aa27.85■■■□□ 2.05
SPHK1-201ENST00000323374 XRN1Q8IZH2 1706 aaKnown RBP27.84■■■□□ 2.05
SPHK1-201ENST00000323374 PIK3R4Q99570 1358 aa27.84■■■□□ 2.05
SPHK1-201ENST00000323374 USP31Q70CQ4 1352 aa27.83■■■□□ 2.05
SPHK1-201ENST00000323374 FAM161AQ3B820 660 aa27.83■■■□□ 2.05
SPHK1-201ENST00000323374 ALDH1L2Q3SY69 923 aa27.83■■■□□ 2.05
SPHK1-201ENST00000323374 LAS1LQ9Y4W2 734 aaKnown RBP27.83■■■□□ 2.05
SPHK1-201ENST00000323374 ZNF428Q96B54 188 aa27.82■■■□□ 2.04
SPHK1-201ENST00000323374 TRIM27P14373 513 aa27.82■■■□□ 2.04
SPHK1-201ENST00000323374 EIF4A2Q14240 407 aaKnown RBP27.82■■■□□ 2.04
SPHK1-201ENST00000323374 ATF7IPQ6VMQ6 1270 aa27.82■■■□□ 2.04
SPHK1-201ENST00000323374 IFT57Q9NWB7 429 aa27.82■■■□□ 2.04
SPHK1-201ENST00000323374 PCDHB15Q9Y5E8 787 aa27.82■■■□□ 2.04
SPHK1-201ENST00000323374 KIF16BQ96L93 1317 aa27.81■■■□□ 2.04
SPHK1-201ENST00000323374 NALCNQ8IZF0 1738 aa27.81■■■□□ 2.04
SPHK1-201ENST00000323374 GNAI1P63096 354 aa27.81■■■□□ 2.04
SPHK1-201ENST00000323374 NGDNQ8NEJ9 315 aaKnown RBP27.8■■■□□ 2.04
SPHK1-201ENST00000323374 ZBTB47Q9UFB7 747 aaPredicted RBP27.8■■■□□ 2.04
SPHK1-201ENST00000323374 NOB1Q9ULX3 412 aaKnown RBP27.8■■■□□ 2.04
SPHK1-201ENST00000323374 IPO8O15397 1037 aaKnown RBP27.79■■■□□ 2.04
SPHK1-201ENST00000323374 KCNA6P17658 529 aa27.79■■■□□ 2.04
SPHK1-201ENST00000323374 THUMPD2Q9BTF0 503 aaKnown RBP27.79■■■□□ 2.04
SPHK1-201ENST00000323374 RWDD1Q9H446 243 aaPredicted RBP27.78■■■□□ 2.04
SPHK1-201ENST00000323374 RIMS1Q86UR5 1692 aaKnown RBP27.77■■■□□ 2.04
SPHK1-201ENST00000323374 ANKARQ7Z5J8 1434 aa27.77■■■□□ 2.04
SPHK1-201ENST00000323374 ZNF853P0CG23 659 aa27.77■■■□□ 2.04
SPHK1-201ENST00000323374 C8orf34Q49A92 452 aa27.77■■■□□ 2.04
SPHK1-201ENST00000323374 DDX19BQ9UMR2 479 aa27.76■■■□□ 2.03
SPHK1-201ENST00000323374 PAK3O75914 559 aaPredicted RBP27.76■■■□□ 2.03
SPHK1-201ENST00000323374 SULT6B1Q6IMI4 303 aa27.76■■■□□ 2.03
SPHK1-201ENST00000323374 BRPF1P55201 1214 aaPredicted RBP27.74■■■□□ 2.03
SPHK1-201ENST00000323374 HSP90AB2PQ58FF8 381 aa27.74■■■□□ 2.03
SPHK1-201ENST00000323374 ANKLE2Q86XL3 938 aa27.74■■■□□ 2.03
SPHK1-201ENST00000323374 CFAP44Q96MT7 982 aa27.74■■■□□ 2.03
SPHK1-201ENST00000323374 ITPRIPQ8IWB1 547 aa27.73■■■□□ 2.03
SPHK1-201ENST00000323374 MBIPQ9NS73 344 aa27.73■■■□□ 2.03
SPHK1-201ENST00000323374 PEAK1Q9H792 1746 aa27.73■■■□□ 2.03
SPHK1-201ENST00000323374 AEBP1Q8IUX7 1158 aa27.73■■■□□ 2.03
SPHK1-201ENST00000323374 RGPD8O14715 1765 aaPredicted RBP27.72■■■□□ 2.03
SPHK1-201ENST00000323374 VAMP4O75379 141 aa27.72■■■□□ 2.03
SPHK1-201ENST00000323374 DLG5Q8TDM6 1919 aa27.71■■■□□ 2.03
SPHK1-201ENST00000323374 SOX12O15370 315 aa27.71■■■□□ 2.03
SPHK1-201ENST00000323374 MAP3K19Q56UN5 1328 aa27.7■■■□□ 2.02
SPHK1-201ENST00000323374 TMEM57Q8N5G2 664 aa27.69■■■□□ 2.02
SPHK1-201ENST00000323374 FAM83GA6ND36 823 aa27.68■■■□□ 2.02
SPHK1-201ENST00000323374 SBNO1A3KN83 1393 aa27.68■■■□□ 2.02
SPHK1-201ENST00000323374 FLT4P35916 1363 aa27.68■■■□□ 2.02
SPHK1-201ENST00000323374 TSPYL6Q8N831 410 aa27.67■■■□□ 2.02
SPHK1-201ENST00000323374 RGPD1P0DJD0 1748 aa27.67■■■□□ 2.02
SPHK1-201ENST00000323374 FMN2Q9NZ56 1722 aa27.67■■■□□ 2.02
SPHK1-201ENST00000323374 ZNF142P52746 1687 aaPredicted RBP27.67■■■□□ 2.02
SPHK1-201ENST00000323374 MRPL50Q8N5N7 158 aaKnown RBP27.66■■■□□ 2.02
SPHK1-201ENST00000323374 DDRGK1Q96HY6 314 aa27.66■■■□□ 2.02
SPHK1-201ENST00000323374 ARHGEF10O15013 1369 aa27.66■■■□□ 2.02
SPHK1-201ENST00000323374 DCTN1Q14203 1278 aa27.65■■■□□ 2.02
SPHK1-201ENST00000323374 TWISTNBQ3B726 338 aaPredicted RBP27.65■■■□□ 2.02
SPHK1-201ENST00000323374 ARHGAP45Q92619 1136 aa27.65■■■□□ 2.02
SPHK1-201ENST00000323374 PDZRN3Q9UPQ7 1066 aa27.65■■■□□ 2.02
SPHK1-201ENST00000323374 PIK3C2AO00443 1686 aa27.65■■■□□ 2.02
SPHK1-201ENST00000323374 NLRP6P59044 892 aa27.64■■■□□ 2.01
SPHK1-201ENST00000323374 HDAC1Q13547 482 aaPredicted RBP27.64■■■□□ 2.01
SPHK1-201ENST00000323374 AMPHP49418 695 aa27.63■■■□□ 2.01
SPHK1-201ENST00000323374 ZBTB40Q9NUA8 1239 aa27.63■■■□□ 2.01
SPHK1-201ENST00000323374 ADAMTSL3P82987 1691 aa27.62■■■□□ 2.01
SPHK1-201ENST00000323374 ELL2O00472 640 aaPredicted RBP27.62■■■□□ 2.01
SPHK1-201ENST00000323374 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
SPHK1-201ENST00000323374 C8orf58Q8NAV2 365 aa27.61■■■□□ 2.01
SPHK1-201ENST00000323374 CHMP4BQ9H444 224 aaKnown RBP27.58■■■□□ 2.01
SPHK1-201ENST00000323374 KIF24Q5T7B8 1368 aa27.57■■■□□ 2
SPHK1-201ENST00000323374 PHF8Q9UPP1 1060 aa27.56■■■□□ 2
SPHK1-201ENST00000323374 KDRP35968 1356 aa27.56■■■□□ 2
SPHK1-201ENST00000323374 CHL1O00533 1208 aa27.56■■■□□ 2
SPHK1-201ENST00000323374 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
SPHK1-201ENST00000323374 MCM10Q7L590 875 aa27.56■■■□□ 2
SPHK1-201ENST00000323374 ABTB2Q8N961 1025 aa27.56■■■□□ 2
SPHK1-201ENST00000323374 SETD1BQ9UPS6 1966 aaKnown RBP27.55■■■□□ 2
SPHK1-201ENST00000323374 IGSF1Q8N6C5 1336 aa27.55■■■□□ 2
SPHK1-201ENST00000323374 VIRMAQ69YN4 1812 aaKnown RBP27.54■■■□□ 2
SPHK1-201ENST00000323374 USP54Q70EL1 1684 aa27.54■■■□□ 2
SPHK1-201ENST00000323374 EYA1Q99502 592 aa27.54■■■□□ 2
SPHK1-201ENST00000323374 NUTM2GQ5VZR2 741 aa27.53■■■□□ 2
SPHK1-201ENST00000323374 ABCC4O15439 1325 aa27.52■■■□□ 2
SPHK1-201ENST00000323374 API5Q9BZZ5 524 aaKnown RBP27.52■■■□□ 2
SPHK1-201ENST00000323374 SMC5Q8IY18 1101 aa27.52■■■□□ 2
SPHK1-201ENST00000323374 ZBTB7BO15156 539 aaPredicted RBP27.51■■□□□ 1.99
SPHK1-201ENST00000323374 HOXC9P31274 260 aa27.51■■□□□ 1.99
SPHK1-201ENST00000323374 MTHFSDQ2M296 383 aaKnown RBP27.51■■□□□ 1.99
SPHK1-201ENST00000323374 ADGRL3Q9HAR2 1447 aa27.51■■□□□ 1.99
SPHK1-201ENST00000323374 KIAA0232Q92628 1395 aa27.51■■□□□ 1.99
SPHK1-201ENST00000323374 MARF1Q9Y4F3 1742 aaKnown RBP27.5■■□□□ 1.99
SPHK1-201ENST00000323374 RTF1Q92541 710 aaKnown RBP27.5■■□□□ 1.99
SPHK1-201ENST00000323374 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
SPHK1-201ENST00000323374 GAS2L2Q8NHY3 880 aa27.49■■□□□ 1.99
SPHK1-201ENST00000323374 RBM33Q96EV2 1170 aaKnown RBP27.49■■□□□ 1.99
SPHK1-201ENST00000323374 CRB1P82279 1406 aa27.49■■□□□ 1.99
SPHK1-201ENST00000323374 C14orf37Q86TY3 774 aa27.48■■□□□ 1.99
SPHK1-201ENST00000323374 FOXO3O43524 673 aa27.46■■□□□ 1.99
SPHK1-201ENST00000323374 ESCO1Q5FWF5 840 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms