RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CALCOCO1Q9P1Z2 691 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 SPATA32Q96LK8 384 aa19.87■□□□□ 0.77
SMCHD1-201ENST00000320876 MSH5O43196 834 aa19.87■□□□□ 0.77
SMCHD1-201ENST00000320876 GNAI2P04899 355 aa19.87■□□□□ 0.77
SMCHD1-201ENST00000320876 PSME1Q06323 249 aa19.87■□□□□ 0.77
SMCHD1-201ENST00000320876 TANGO6Q9C0B7 1094 aa19.87■□□□□ 0.77
SMCHD1-201ENST00000320876 ARHGAP29Q52LW3 1261 aa19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 SAMD1Q6SPF0 538 aaPredicted RBP19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 DNAJC2Q99543 621 aaKnown RBP19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 UPF3BQ9BZI7 483 aaKnown RBP19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 NUP62CLQ9H1M0 184 aa19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 SRCIN1Q9C0H9 1055 aa19.86■□□□□ 0.77
SMCHD1-201ENST00000320876 HMOX1P09601 288 aa19.85■□□□□ 0.77
SMCHD1-201ENST00000320876 ATP2B1P20020 1258 aa19.85■□□□□ 0.77
SMCHD1-201ENST00000320876 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
SMCHD1-201ENST00000320876 PDCL3Q9H2J4 239 aa19.85■□□□□ 0.77
SMCHD1-201ENST00000320876 KIF21BO75037 1637 aa19.85■□□□□ 0.77
SMCHD1-201ENST00000320876 LARP1BQ659C4 914 aaKnown RBP19.85■□□□□ 0.77
SMCHD1-201ENST00000320876 MAP2K1Q02750 393 aaPredicted RBP19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 STAC3Q96MF2 364 aa19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 SURF6O75683 361 aaKnown RBP19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 CGNQ9P2M7 1197 aaKnown RBP19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 GOLGA6L10A0A0M3HER8 536 aa19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 MICALCLQ6ZW33 695 aa19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 ZSCAN12O43309 604 aa19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 BACH2Q9BYV9 841 aa19.84■□□□□ 0.77
SMCHD1-201ENST00000320876 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.77
SMCHD1-201ENST00000320876 IMMTQ16891 758 aaKnown RBP19.83■□□□□ 0.77
SMCHD1-201ENST00000320876 KIF18AQ8NI77 898 aa19.83■□□□□ 0.77
SMCHD1-201ENST00000320876 CCDC69A6NI79 296 aa19.83■□□□□ 0.76
SMCHD1-201ENST00000320876 PDZRN3Q9UPQ7 1066 aa19.83■□□□□ 0.76
SMCHD1-201ENST00000320876 GNL3LQ9NVN8 582 aaKnown RBP19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 NOL7Q9UMY1 257 aaKnown RBP19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 KDM4AO75164 1064 aa19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 CASQ1P31415 396 aa19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 MAP3K11Q16584 847 aa19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 KIF6Q6ZMV9 814 aa19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 TAF4BQ92750 862 aa19.82■□□□□ 0.76
SMCHD1-201ENST00000320876 MTMR7Q9Y216 660 aa19.81■□□□□ 0.76
SMCHD1-201ENST00000320876 PTPN14Q15678 1187 aa19.81■□□□□ 0.76
SMCHD1-201ENST00000320876 NACAP1Q9BZK3 213 aa19.81■□□□□ 0.76
SMCHD1-201ENST00000320876 TTC39AQ5SRH9 613 aa19.81■□□□□ 0.76
SMCHD1-201ENST00000320876 SFPQP23246 707 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMCHD1-201ENST00000320876 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
SMCHD1-201ENST00000320876 CCDC158Q5M9N0 1113 aa19.8■□□□□ 0.76
SMCHD1-201ENST00000320876 SEPT11Q9NVA2 429 aaKnown RBP19.8■□□□□ 0.76
SMCHD1-201ENST00000320876 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
SMCHD1-201ENST00000320876 KIF5CO60282 957 aa19.8■□□□□ 0.76
SMCHD1-201ENST00000320876 PLEKHH1Q9ULM0 1364 aa19.79■□□□□ 0.76
SMCHD1-201ENST00000320876 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
SMCHD1-201ENST00000320876 STAMBPO95630 424 aa19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 NF2P35240 595 aa19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 SYCE3A1L190 88 aa19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 STK3Q13188 491 aa19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 ZSCAN31Q96LW9 406 aaPredicted RBP19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 MCM4P33991 863 aa19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 DHX37Q8IY37 1157 aaKnown RBP19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 BMP2KQ9NSY1 1161 aaPredicted RBP19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
SMCHD1-201ENST00000320876 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 CEP131Q9UPN4 1083 aa19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 CCDC57Q2TAC2 916 aa19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 WASF1Q92558 559 aa19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 EIF5P55010 431 aaKnown RBP19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 FILIP1Q7Z7B0 1213 aa19.77■□□□□ 0.76
SMCHD1-201ENST00000320876 TRIM21P19474 475 aaKnown RBP19.77■□□□□ 0.75
SMCHD1-201ENST00000320876 CFAP100Q494V2 611 aa19.77■□□□□ 0.75
SMCHD1-201ENST00000320876 GAS2L2Q8NHY3 880 aa19.77■□□□□ 0.75
SMCHD1-201ENST00000320876 PLEKHH2Q8IVE3 1493 aa19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 ADAMTS8Q9UP79 889 aa19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 GCOM1H8Y6P7 765 aaPredicted RBP19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 MYZAPP0CAP1 466 aa19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 KRT32Q14532 448 aa19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 SPA17Q15506 151 aa19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 PPP1R12BO60237 982 aaPredicted RBP19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 LUZP1Q86V48 1076 aa19.76■□□□□ 0.75
SMCHD1-201ENST00000320876 ZSCAN25Q6NSZ9 544 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 SPATA24Q86W54 205 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 POTEB2H3BUK9 544 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 CEP63Q96MT8 703 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 ZHX3Q9H4I2 956 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 POTEJP0CG39 1038 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 CCDC183Q5T5S1 534 aa19.75■□□□□ 0.75
SMCHD1-201ENST00000320876 CETN2P41208 172 aa19.74■□□□□ 0.75
SMCHD1-201ENST00000320876 PPM1EQ8WY54 764 aa19.74■□□□□ 0.75
SMCHD1-201ENST00000320876 POLA1P09884 1462 aaPredicted RBP19.74■□□□□ 0.75
SMCHD1-201ENST00000320876 C1orf115Q9H7X2 142 aa19.74■□□□□ 0.75
SMCHD1-201ENST00000320876 PDRG1Q9NUG6 133 aa19.74■□□□□ 0.75
SMCHD1-201ENST00000320876 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
SMCHD1-201ENST00000320876 BLOC1S2Q6QNY1 142 aa19.73■□□□□ 0.75
SMCHD1-201ENST00000320876 MPNDQ8N594 471 aa19.73■□□□□ 0.75
SMCHD1-201ENST00000320876 VPS36Q86VN1 386 aa19.72■□□□□ 0.75
SMCHD1-201ENST00000320876 CBX1P83916 185 aa19.72■□□□□ 0.75
SMCHD1-201ENST00000320876 IFFO1Q0D2I5 559 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms