RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PEAK1Q9H792 1746 aa24.87■■□□□ 1.57
EXOSC4-201ENST00000316052 DDB1Q16531 1140 aa24.87■■□□□ 1.57
EXOSC4-201ENST00000316052 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
EXOSC4-201ENST00000316052 SBF2Q86WG5 1849 aa24.85■■□□□ 1.57
EXOSC4-201ENST00000316052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.85■■□□□ 1.57
EXOSC4-201ENST00000316052 NUP188Q5SRE5 1749 aa24.85■■□□□ 1.57
EXOSC4-201ENST00000316052 LRRC37A3O60309 1634 aa24.85■■□□□ 1.57
EXOSC4-201ENST00000316052 NFAT5O94916 1531 aa24.85■■□□□ 1.57
EXOSC4-201ENST00000316052 C11orf95C9JLR9 678 aaPredicted RBP24.84■■□□□ 1.57
EXOSC4-201ENST00000316052 PTF1AQ7RTS3 328 aa24.84■■□□□ 1.57
EXOSC4-201ENST00000316052 OVOS2A0A0G2JMS6 1433 aa24.84■■□□□ 1.57
EXOSC4-201ENST00000316052 OVOS2A0A0J9YW53 1432 aa24.84■■□□□ 1.57
EXOSC4-201ENST00000316052 OVOS2Q6IE36 1432 aa24.84■■□□□ 1.57
EXOSC4-201ENST00000316052 MON2Q7Z3U7 1717 aa24.83■■□□□ 1.57
EXOSC4-201ENST00000316052 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
EXOSC4-201ENST00000316052 CARD10Q9BWT7 1032 aa24.83■■□□□ 1.57
EXOSC4-201ENST00000316052 CD163L1Q9NR16 1453 aa24.83■■□□□ 1.56
EXOSC4-201ENST00000316052 CSB-PGBD3P0DP91 1061 aa24.82■■□□□ 1.56
EXOSC4-201ENST00000316052 SLC12A5Q9H2X9 1139 aa24.82■■□□□ 1.56
EXOSC4-201ENST00000316052 WNK3Q9BYP7 1800 aa24.82■■□□□ 1.56
EXOSC4-201ENST00000316052 NBPF14Q5TI25 921 aa24.81■■□□□ 1.56
EXOSC4-201ENST00000316052 NME9Q86XW9 330 aa24.81■■□□□ 1.56
EXOSC4-201ENST00000316052 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
EXOSC4-201ENST00000316052 CDCA7Q9BWT1 371 aaPredicted RBP24.8■■□□□ 1.56
EXOSC4-201ENST00000316052 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
EXOSC4-201ENST00000316052 PLSCR1O15162 318 aa24.78■■□□□ 1.56
EXOSC4-201ENST00000316052 BCL11BQ9C0K0 894 aaPredicted RBP24.78■■□□□ 1.56
EXOSC4-201ENST00000316052 TONSLQ96HA7 1378 aa24.78■■□□□ 1.56
EXOSC4-201ENST00000316052 HDGFL2Q7Z4V5 671 aaPredicted RBP24.75■■□□□ 1.55
EXOSC4-201ENST00000316052 EXOC5O00471 708 aa24.74■■□□□ 1.55
EXOSC4-201ENST00000316052 PROM2Q8N271 834 aa24.74■■□□□ 1.55
EXOSC4-201ENST00000316052 BCL9O00512 1426 aa24.74■■□□□ 1.55
EXOSC4-201ENST00000316052 USP54Q70EL1 1684 aa24.74■■□□□ 1.55
EXOSC4-201ENST00000316052 ABCC6O95255 1503 aa24.73■■□□□ 1.55
EXOSC4-201ENST00000316052 CCDC7Q96M83 1385 aa24.72■■□□□ 1.55
EXOSC4-201ENST00000316052 RGPD3A6NKT7 1758 aaPredicted RBP24.72■■□□□ 1.55
EXOSC4-201ENST00000316052 RGPD4Q7Z3J3 1758 aa24.72■■□□□ 1.55
EXOSC4-201ENST00000316052 A0A1W2PP64 1363 aa24.71■■□□□ 1.55
EXOSC4-201ENST00000316052 PUS7Q96PZ0 661 aaKnown RBP24.71■■□□□ 1.55
EXOSC4-201ENST00000316052 TESK2Q96S53 571 aa24.71■■□□□ 1.55
EXOSC4-201ENST00000316052 TERF2IPQ9NYB0 399 aa24.71■■□□□ 1.55
EXOSC4-201ENST00000316052 EDC4Q6P2E9 1401 aaKnown RBP24.7■■□□□ 1.55
EXOSC4-201ENST00000316052 LTN1O94822 1766 aa24.7■■□□□ 1.55
EXOSC4-201ENST00000316052 ERBB3P21860 1342 aa24.7■■□□□ 1.54
EXOSC4-201ENST00000316052 ANO8Q9HCE9 1232 aaPredicted RBP24.7■■□□□ 1.54
EXOSC4-201ENST00000316052 NLRP2Q9NX02 1062 aa24.7■■□□□ 1.54
EXOSC4-201ENST00000316052 ST20-MTHFSA0A0A6YYL1 179 aa24.69■■□□□ 1.54
EXOSC4-201ENST00000316052 KCNQ2O43526 872 aa24.67■■□□□ 1.54
EXOSC4-201ENST00000316052 ANKRD24Q8TF21 1146 aa24.66■■□□□ 1.54
EXOSC4-201ENST00000316052 SPON1Q9HCB6 807 aa24.66■■□□□ 1.54
EXOSC4-201ENST00000316052 TNS2Q63HR2 1409 aa24.66■■□□□ 1.54
EXOSC4-201ENST00000316052 KAT6BQ8WYB5 2073 aa24.65■■□□□ 1.54
EXOSC4-201ENST00000316052 PDGFDQ9GZP0 370 aaPredicted RBP24.65■■□□□ 1.54
EXOSC4-201ENST00000316052 IL2RBP14784 551 aa24.63■■□□□ 1.53
EXOSC4-201ENST00000316052 TXNRD1Q16881 649 aa24.63■■□□□ 1.53
EXOSC4-201ENST00000316052 ACSBG1Q96GR2 724 aa24.62■■□□□ 1.53
EXOSC4-201ENST00000316052 IP6K1Q92551 441 aa24.61■■□□□ 1.53
EXOSC4-201ENST00000316052 FBLN1P23142 703 aa24.6■■□□□ 1.53
EXOSC4-201ENST00000316052 PPP1R1BQ9UD71 204 aaPredicted RBP24.6■■□□□ 1.53
EXOSC4-201ENST00000316052 CASZ1Q86V15 1759 aa24.59■■□□□ 1.53
EXOSC4-201ENST00000316052 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
EXOSC4-201ENST00000316052 LTV1Q96GA3 475 aaPredicted RBP24.58■■□□□ 1.53
EXOSC4-201ENST00000316052 NHSQ6T4R5 1651 aa24.57■■□□□ 1.52
EXOSC4-201ENST00000316052 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
EXOSC4-201ENST00000316052 COG3Q96JB2 828 aa24.56■■□□□ 1.52
EXOSC4-201ENST00000316052 SLC24A1O60721 1099 aa24.55■■□□□ 1.52
EXOSC4-201ENST00000316052 ZBTB7AO95365 584 aa24.55■■□□□ 1.52
EXOSC4-201ENST00000316052 SLC15A2Q16348 729 aa24.55■■□□□ 1.52
EXOSC4-201ENST00000316052 STK32BQ9NY57 414 aa24.55■■□□□ 1.52
EXOSC4-201ENST00000316052 MAP3K19Q56UN5 1328 aa24.55■■□□□ 1.52
EXOSC4-201ENST00000316052 HOXC9P31274 260 aa24.53■■□□□ 1.52
EXOSC4-201ENST00000316052 ATF5Q9Y2D1 282 aaPredicted RBP24.52■■□□□ 1.52
EXOSC4-201ENST00000316052 ANKRD36BQ8N2N9 1353 aa24.52■■□□□ 1.52
EXOSC4-201ENST00000316052 BTAF1O14981 1849 aa24.51■■□□□ 1.51
EXOSC4-201ENST00000316052 PTGER2P43116 358 aa24.51■■□□□ 1.51
EXOSC4-201ENST00000316052 DDX54Q8TDD1 881 aaKnown RBP24.51■■□□□ 1.51
EXOSC4-201ENST00000316052 AMPHP49418 695 aa24.5■■□□□ 1.51
EXOSC4-201ENST00000316052 USP47Q96K76 1375 aa24.5■■□□□ 1.51
EXOSC4-201ENST00000316052 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
EXOSC4-201ENST00000316052 FYB1O15117 783 aa24.49■■□□□ 1.51
EXOSC4-201ENST00000316052 TMF1P82094 1093 aa24.49■■□□□ 1.51
EXOSC4-201ENST00000316052 GGNBP2Q9H3C7 697 aa24.48■■□□□ 1.51
EXOSC4-201ENST00000316052 FAM208AQ9UK61 1670 aaKnown RBP24.48■■□□□ 1.51
EXOSC4-201ENST00000316052 RRS1Q15050 365 aaKnown RBP24.47■■□□□ 1.51
EXOSC4-201ENST00000316052 LRRC4BQ9NT99 713 aa24.47■■□□□ 1.51
EXOSC4-201ENST00000316052 UTRNP46939 3433 aa24.47■■□□□ 1.51
EXOSC4-201ENST00000316052 PAPPAQ13219 1627 aa24.44■■□□□ 1.5
EXOSC4-201ENST00000316052 ZNF827Q17R98 1081 aa24.44■■□□□ 1.5
EXOSC4-201ENST00000316052 MYOM1P52179 1685 aa24.43■■□□□ 1.5
EXOSC4-201ENST00000316052 NBPF6Q5VWK0 638 aa24.43■■□□□ 1.5
EXOSC4-201ENST00000316052 NBPF4Q96M43 638 aa24.43■■□□□ 1.5
EXOSC4-201ENST00000316052 SGIP1Q9BQI5 828 aa24.43■■□□□ 1.5
EXOSC4-201ENST00000316052 MTFR1LQ9H019 292 aa24.43■■□□□ 1.5
EXOSC4-201ENST00000316052 YY1P25490 414 aa24.42■■□□□ 1.5
EXOSC4-201ENST00000316052 ZCRB1Q8TBF4 217 aaKnown RBP24.42■■□□□ 1.5
EXOSC4-201ENST00000316052 PRIM1P49642 420 aaKnown RBP24.41■■□□□ 1.5
EXOSC4-201ENST00000316052 MEGF6O75095 1541 aa24.4■■□□□ 1.5
EXOSC4-201ENST00000316052 SHANK3Q9BYB0 1731 aa24.4■■□□□ 1.5
EXOSC4-201ENST00000316052 RTL1A6NKG5 1358 aa24.4■■□□□ 1.5
EXOSC4-201ENST00000316052 DCAF8L1A6NGE4 600 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms