RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.41
GPHN-201ENST00000315266 PTPRMP28827 1452 aa12.46□□□□□ -0.41
GPHN-201ENST00000315266 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.41
GPHN-201ENST00000315266 PIK3R4Q99570 1358 aa12.46□□□□□ -0.42
GPHN-201ENST00000315266 ACEP12821 1306 aa12.46□□□□□ -0.42
GPHN-201ENST00000315266 RWDD1Q9H446 243 aaPredicted RBP12.46□□□□□ -0.42
GPHN-201ENST00000315266 KCNJ4P48050 445 aa12.45□□□□□ -0.42
GPHN-201ENST00000315266 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
GPHN-201ENST00000315266 FYB1O15117 783 aa12.45□□□□□ -0.42
GPHN-201ENST00000315266 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
GPHN-201ENST00000315266 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
GPHN-201ENST00000315266 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
GPHN-201ENST00000315266 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
GPHN-201ENST00000315266 DLC1Q96QB1 1528 aa12.44□□□□□ -0.42
GPHN-201ENST00000315266 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
GPHN-201ENST00000315266 UBR1Q8IWV7 1749 aa12.44□□□□□ -0.42
GPHN-201ENST00000315266 TRIM6-TRIM34B2RNG4 842 aa12.44□□□□□ -0.42
GPHN-201ENST00000315266 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
GPHN-201ENST00000315266 FRAT2O75474 233 aaPredicted RBP12.43□□□□□ -0.42
GPHN-201ENST00000315266 MCM10Q7L590 875 aa12.43□□□□□ -0.42
GPHN-201ENST00000315266 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
GPHN-201ENST00000315266 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
GPHN-201ENST00000315266 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
GPHN-201ENST00000315266 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
GPHN-201ENST00000315266 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
GPHN-201ENST00000315266 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
GPHN-201ENST00000315266 FAM83GA6ND36 823 aa12.42□□□□□ -0.42
GPHN-201ENST00000315266 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
GPHN-201ENST00000315266 KAT6BQ8WYB5 2073 aa12.41□□□□□ -0.42
GPHN-201ENST00000315266 SLIT1O75093 1534 aa12.41□□□□□ -0.42
GPHN-201ENST00000315266 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
GPHN-201ENST00000315266 MYO3AQ8NEV4 1616 aa12.41□□□□□ -0.42
GPHN-201ENST00000315266 ARHGEF28Q8N1W1 1705 aaKnown RBP12.41□□□□□ -0.42
GPHN-201ENST00000315266 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
GPHN-201ENST00000315266 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
GPHN-201ENST00000315266 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
GPHN-201ENST00000315266 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
GPHN-201ENST00000315266 FAM177BA6PVY3 158 aa12.4□□□□□ -0.42
GPHN-201ENST00000315266 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
GPHN-201ENST00000315266 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
GPHN-201ENST00000315266 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.43
GPHN-201ENST00000315266 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
GPHN-201ENST00000315266 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
GPHN-201ENST00000315266 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
GPHN-201ENST00000315266 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
GPHN-201ENST00000315266 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
GPHN-201ENST00000315266 FGD1P98174 961 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 TECPR2O15040 1411 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 ATP7BP35670 1465 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 TTC21AQ8NDW8 1320 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 RAPGEF4Q8WZA2 1011 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 RILPL2Q969X0 211 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
GPHN-201ENST00000315266 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
GPHN-201ENST00000315266 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
GPHN-201ENST00000315266 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
GPHN-201ENST00000315266 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
GPHN-201ENST00000315266 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
GPHN-201ENST00000315266 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
GPHN-201ENST00000315266 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 PTCH1Q13635 1447 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 DIP2AQ14689 1571 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 MSH6P52701 1360 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 TMPOP42166 694 aaKnown RBP12.36□□□□□ -0.43
GPHN-201ENST00000315266 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 TWISTNBQ3B726 338 aaPredicted RBP12.36□□□□□ -0.43
GPHN-201ENST00000315266 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
GPHN-201ENST00000315266 TRIM44Q96DX7 344 aaPredicted RBP12.36□□□□□ -0.43
GPHN-201ENST00000315266 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
GPHN-201ENST00000315266 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
GPHN-201ENST00000315266 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
GPHN-201ENST00000315266 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
GPHN-201ENST00000315266 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
GPHN-201ENST00000315266 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
GPHN-201ENST00000315266 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
GPHN-201ENST00000315266 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
GPHN-201ENST00000315266 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.43
GPHN-201ENST00000315266 GNAI1P63096 354 aa12.33□□□□□ -0.44
GPHN-201ENST00000315266 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
GPHN-201ENST00000315266 ANXA1P04083 346 aa12.33□□□□□ -0.44
GPHN-201ENST00000315266 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
GPHN-201ENST00000315266 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
GPHN-201ENST00000315266 POLKQ9UBT6 870 aa12.33□□□□□ -0.44
GPHN-201ENST00000315266 CPS1P31327 1500 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 L1TD1Q5T7N2 865 aaKnown RBP12.32□□□□□ -0.44
GPHN-201ENST00000315266 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
GPHN-201ENST00000315266 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 MYL6BP14649 208 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 TAF7LQ5H9L4 462 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 KRT28Q7Z3Y7 464 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 FCHSD2O94868 740 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
GPHN-201ENST00000315266 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
GPHN-201ENST00000315266 CHMP4BQ9H444 224 aaKnown RBP12.32□□□□□ -0.44
GPHN-201ENST00000315266 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms