RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 CLSPNQ9HAW4 1339 aa17.74■□□□□ 0.43
CKS2-201ENST00000314355 SLIT3O75094 1523 aa17.74■□□□□ 0.43
CKS2-201ENST00000314355 NME9Q86XW9 330 aa17.74■□□□□ 0.43
CKS2-201ENST00000314355 EXOC5O00471 708 aa17.73■□□□□ 0.43
CKS2-201ENST00000314355 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
CKS2-201ENST00000314355 CARD10Q9BWT7 1032 aa17.73■□□□□ 0.43
CKS2-201ENST00000314355 THSD7AQ9UPZ6 1657 aa17.73■□□□□ 0.43
CKS2-201ENST00000314355 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
CKS2-201ENST00000314355 COG3Q96JB2 828 aa17.72■□□□□ 0.43
CKS2-201ENST00000314355 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
CKS2-201ENST00000314355 EZH2Q15910 746 aaKnown RBP17.71■□□□□ 0.43
CKS2-201ENST00000314355 TESK2Q96S53 571 aa17.71■□□□□ 0.43
CKS2-201ENST00000314355 NLRP2Q9NX02 1062 aa17.71■□□□□ 0.43
CKS2-201ENST00000314355 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
CKS2-201ENST00000314355 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.42
CKS2-201ENST00000314355 PIK3C2AO00443 1686 aa17.7■□□□□ 0.42
CKS2-201ENST00000314355 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
CKS2-201ENST00000314355 EP400Q96L91 3159 aa17.69■□□□□ 0.42
CKS2-201ENST00000314355 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
CKS2-201ENST00000314355 CCDC7Q96M83 1385 aa17.69■□□□□ 0.42
CKS2-201ENST00000314355 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
CKS2-201ENST00000314355 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
CKS2-201ENST00000314355 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
CKS2-201ENST00000314355 USP47Q96K76 1375 aa17.67■□□□□ 0.42
CKS2-201ENST00000314355 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
CKS2-201ENST00000314355 OVOS2A0A0J9YW53 1432 aa17.67■□□□□ 0.42
CKS2-201ENST00000314355 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
CKS2-201ENST00000314355 OVOS2Q6IE36 1432 aa17.67■□□□□ 0.42
CKS2-201ENST00000314355 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
CKS2-201ENST00000314355 AMPHP49418 695 aa17.66■□□□□ 0.42
CKS2-201ENST00000314355 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
CKS2-201ENST00000314355 ANKRD24Q8TF21 1146 aa17.65■□□□□ 0.42
CKS2-201ENST00000314355 CD163L1Q9NR16 1453 aa17.64■□□□□ 0.41
CKS2-201ENST00000314355 IL2RBP14784 551 aa17.64■□□□□ 0.41
CKS2-201ENST00000314355 IP6K1Q92551 441 aa17.64■□□□□ 0.41
CKS2-201ENST00000314355 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
CKS2-201ENST00000314355 MON2Q7Z3U7 1717 aa17.64■□□□□ 0.41
CKS2-201ENST00000314355 ERBB3P21860 1342 aa17.63■□□□□ 0.41
CKS2-201ENST00000314355 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
CKS2-201ENST00000314355 PLSCR1O15162 318 aa17.62■□□□□ 0.41
CKS2-201ENST00000314355 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
CKS2-201ENST00000314355 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
CKS2-201ENST00000314355 ABCC6O95255 1503 aa17.62■□□□□ 0.41
CKS2-201ENST00000314355 PARP4Q9UKK3 1724 aaKnown RBP17.61■□□□□ 0.41
CKS2-201ENST00000314355 COL18A1P39060 1754 aa17.61■□□□□ 0.41
CKS2-201ENST00000314355 NFAT5O94916 1531 aa17.61■□□□□ 0.41
CKS2-201ENST00000314355 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
CKS2-201ENST00000314355 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.4
CKS2-201ENST00000314355 FYB1O15117 783 aa17.57■□□□□ 0.4
CKS2-201ENST00000314355 HOXC9P31274 260 aa17.56■□□□□ 0.4
CKS2-201ENST00000314355 EIF4G2P78344 907 aaKnown RBP eCLIP17.56■□□□□ 0.4
CKS2-201ENST00000314355 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
CKS2-201ENST00000314355 MAP3K19Q56UN5 1328 aa17.55■□□□□ 0.4
CKS2-201ENST00000314355 TNS1Q9HBL0 1735 aaKnown RBP17.55■□□□□ 0.4
CKS2-201ENST00000314355 BCL9O00512 1426 aa17.55■□□□□ 0.4
CKS2-201ENST00000314355 DDX54Q8TDD1 881 aaKnown RBP17.54■□□□□ 0.4
CKS2-201ENST00000314355 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
CKS2-201ENST00000314355 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
CKS2-201ENST00000314355 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
CKS2-201ENST00000314355 LRRC37A3O60309 1634 aa17.52■□□□□ 0.4
CKS2-201ENST00000314355 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
CKS2-201ENST00000314355 STK32BQ9NY57 414 aa17.52■□□□□ 0.4
CKS2-201ENST00000314355 PPP1R1BQ9UD71 204 aaPredicted RBP17.52■□□□□ 0.4
CKS2-201ENST00000314355 LTN1O94822 1766 aa17.52■□□□□ 0.4
CKS2-201ENST00000314355 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
CKS2-201ENST00000314355 FBLN1P23142 703 aa17.51■□□□□ 0.39
CKS2-201ENST00000314355 TXNRD1Q16881 649 aa17.51■□□□□ 0.39
CKS2-201ENST00000314355 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
CKS2-201ENST00000314355 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
CKS2-201ENST00000314355 CGNL1Q0VF96 1302 aa17.5■□□□□ 0.39
CKS2-201ENST00000314355 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
CKS2-201ENST00000314355 ZCRB1Q8TBF4 217 aaKnown RBP17.5■□□□□ 0.39
CKS2-201ENST00000314355 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
CKS2-201ENST00000314355 KCNQ2O43526 872 aa17.49■□□□□ 0.39
CKS2-201ENST00000314355 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
CKS2-201ENST00000314355 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
CKS2-201ENST00000314355 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
CKS2-201ENST00000314355 SYTL4Q96C24 671 aaPredicted RBP17.48■□□□□ 0.39
CKS2-201ENST00000314355 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.39
CKS2-201ENST00000314355 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
CKS2-201ENST00000314355 HSPA5P11021 654 aaKnown RBP17.46■□□□□ 0.39
CKS2-201ENST00000314355 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
CKS2-201ENST00000314355 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
CKS2-201ENST00000314355 WNK3Q9BYP7 1800 aa17.46■□□□□ 0.39
CKS2-201ENST00000314355 PEAK1Q9H792 1746 aa17.46■□□□□ 0.39
CKS2-201ENST00000314355 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
CKS2-201ENST00000314355 FLT4P35916 1363 aa17.45■□□□□ 0.38
CKS2-201ENST00000314355 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
CKS2-201ENST00000314355 NBPF6Q5VWK0 638 aa17.45■□□□□ 0.38
CKS2-201ENST00000314355 PROM2Q8N271 834 aa17.45■□□□□ 0.38
CKS2-201ENST00000314355 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
CKS2-201ENST00000314355 LRP5O75197 1615 aa17.45■□□□□ 0.38
CKS2-201ENST00000314355 SLC15A2Q16348 729 aa17.44■□□□□ 0.38
CKS2-201ENST00000314355 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
CKS2-201ENST00000314355 INSRP06213 1382 aa17.43■□□□□ 0.38
CKS2-201ENST00000314355 RREB1Q92766 1687 aa17.42■□□□□ 0.38
CKS2-201ENST00000314355 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
CKS2-201ENST00000314355 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
CKS2-201ENST00000314355 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
CKS2-201ENST00000314355 SLC27A3Q5K4L6 730 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms