RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 DHX16O60231 1041 aaKnown RBP18.29■□□□□ 0.52
KDM3A-201ENST00000312912 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
KDM3A-201ENST00000312912 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
KDM3A-201ENST00000312912 FIBPO43427 364 aa18.29■□□□□ 0.52
KDM3A-201ENST00000312912 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
KDM3A-201ENST00000312912 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
KDM3A-201ENST00000312912 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
KDM3A-201ENST00000312912 SYTL4Q96C24 671 aaPredicted RBP18.29■□□□□ 0.52
KDM3A-201ENST00000312912 H0YHG0 523 aa18.28■□□□□ 0.52
KDM3A-201ENST00000312912 GPRASP1Q5JY77 1395 aa18.28■□□□□ 0.52
KDM3A-201ENST00000312912 CYP46A1Q9Y6A2 500 aa18.28■□□□□ 0.52
KDM3A-201ENST00000312912 BRMS1Q9HCU9 246 aa18.28■□□□□ 0.52
KDM3A-201ENST00000312912 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
KDM3A-201ENST00000312912 ABCA10Q8WWZ4 1543 aa18.27■□□□□ 0.52
KDM3A-201ENST00000312912 SART3Q15020 963 aaKnown RBP18.27■□□□□ 0.52
KDM3A-201ENST00000312912 ANKRD1Q15327 319 aa18.27■□□□□ 0.52
KDM3A-201ENST00000312912 PDCL2Q8N4E4 241 aa18.27■□□□□ 0.52
KDM3A-201ENST00000312912 CALCOCO1Q9P1Z2 691 aa18.27■□□□□ 0.52
KDM3A-201ENST00000312912 ZNF396Q96N95 335 aaPredicted RBP18.27■□□□□ 0.51
KDM3A-201ENST00000312912 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.51
KDM3A-201ENST00000312912 AK7Q96M32 723 aa18.26■□□□□ 0.51
KDM3A-201ENST00000312912 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
KDM3A-201ENST00000312912 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
KDM3A-201ENST00000312912 USP8P40818 1118 aa18.25■□□□□ 0.51
KDM3A-201ENST00000312912 PATL2C9JE40 543 aaKnown RBP18.25■□□□□ 0.51
KDM3A-201ENST00000312912 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
KDM3A-201ENST00000312912 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
KDM3A-201ENST00000312912 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
KDM3A-201ENST00000312912 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
KDM3A-201ENST00000312912 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
KDM3A-201ENST00000312912 CBX1P83916 185 aa18.24■□□□□ 0.51
KDM3A-201ENST00000312912 DHX8Q14562 1220 aaKnown RBP18.24■□□□□ 0.51
KDM3A-201ENST00000312912 KRT85P78386 507 aa18.23■□□□□ 0.51
KDM3A-201ENST00000312912 DNAJC2Q99543 621 aaKnown RBP18.23■□□□□ 0.51
KDM3A-201ENST00000312912 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
KDM3A-201ENST00000312912 STK38Q15208 465 aa18.22■□□□□ 0.51
KDM3A-201ENST00000312912 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
KDM3A-201ENST00000312912 CCP110O43303 1012 aa18.22■□□□□ 0.51
KDM3A-201ENST00000312912 CLCN1P35523 988 aa18.22■□□□□ 0.51
KDM3A-201ENST00000312912 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
KDM3A-201ENST00000312912 RAD21O60216 631 aa18.22■□□□□ 0.51
KDM3A-201ENST00000312912 SUPT6HQ7KZ85 1726 aaKnown RBP18.22■□□□□ 0.51
KDM3A-201ENST00000312912 PDILTQ8N807 584 aa18.21■□□□□ 0.51
KDM3A-201ENST00000312912 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
KDM3A-201ENST00000312912 TCEAL9Q9UHQ7 104 aa18.21■□□□□ 0.51
KDM3A-201ENST00000312912 RUFY1Q96T51 708 aa18.21■□□□□ 0.5
KDM3A-201ENST00000312912 ERICH4A6NGS2 130 aa18.2■□□□□ 0.5
KDM3A-201ENST00000312912 CDR1P51861 262 aa18.2■□□□□ 0.5
KDM3A-201ENST00000312912 TMEM57Q8N5G2 664 aa18.2■□□□□ 0.5
KDM3A-201ENST00000312912 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
KDM3A-201ENST00000312912 RTEL1-TNFRSF6BF6WH68 1400 aa18.2■□□□□ 0.5
KDM3A-201ENST00000312912 FMNL2Q96PY5 1086 aa18.2■□□□□ 0.5
KDM3A-201ENST00000312912 EPRSP07814 1512 aaKnown RBP18.19■□□□□ 0.5
KDM3A-201ENST00000312912 LARP1BQ659C4 914 aaKnown RBP18.19■□□□□ 0.5
KDM3A-201ENST00000312912 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
KDM3A-201ENST00000312912 FILIP1LQ4L180 1135 aa18.19■□□□□ 0.5
KDM3A-201ENST00000312912 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
KDM3A-201ENST00000312912 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
KDM3A-201ENST00000312912 SMC2O95347 1197 aa18.18■□□□□ 0.5
KDM3A-201ENST00000312912 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
KDM3A-201ENST00000312912 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
KDM3A-201ENST00000312912 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
KDM3A-201ENST00000312912 ZNF530Q6P9A1 599 aaPredicted RBP18.18■□□□□ 0.5
KDM3A-201ENST00000312912 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
KDM3A-201ENST00000312912 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
KDM3A-201ENST00000312912 NSD3Q9BZ95 1437 aa18.18■□□□□ 0.5
KDM3A-201ENST00000312912 OFD1O75665 1012 aa18.17■□□□□ 0.5
KDM3A-201ENST00000312912 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
KDM3A-201ENST00000312912 ERCC4Q92889 916 aaPredicted RBP18.17■□□□□ 0.5
KDM3A-201ENST00000312912 TNMDQ9H2S6 317 aa18.17■□□□□ 0.5
KDM3A-201ENST00000312912 PIP4K2AP48426 406 aaPredicted RBP18.17■□□□□ 0.5
KDM3A-201ENST00000312912 SRGAP3O43295 1099 aa18.17■□□□□ 0.5
KDM3A-201ENST00000312912 NAP1L1P55209 391 aaKnown RBP18.17■□□□□ 0.5
KDM3A-201ENST00000312912 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
KDM3A-201ENST00000312912 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
KDM3A-201ENST00000312912 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
KDM3A-201ENST00000312912 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
KDM3A-201ENST00000312912 ATP2B1P20020 1258 aa18.16■□□□□ 0.5
KDM3A-201ENST00000312912 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
KDM3A-201ENST00000312912 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
KDM3A-201ENST00000312912 CTDP1Q9Y5B0 961 aaPredicted RBP18.16■□□□□ 0.5
KDM3A-201ENST00000312912 SMARCE1Q969G3 411 aa18.15■□□□□ 0.5
KDM3A-201ENST00000312912 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
KDM3A-201ENST00000312912 KRT32Q14532 448 aa18.15■□□□□ 0.5
KDM3A-201ENST00000312912 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
KDM3A-201ENST00000312912 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■□□ 14.8
KDM3A-201ENST00000312912 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
KDM3A-201ENST00000312912 TXLNAP40222 546 aa18.14■□□□□ 0.49
KDM3A-201ENST00000312912 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
KDM3A-201ENST00000312912 ME1P48163 572 aa18.14■□□□□ 0.49
KDM3A-201ENST00000312912 CEBPZQ03701 1054 aaKnown RBP18.14■□□□□ 0.49
KDM3A-201ENST00000312912 SPC24Q8NBT2 197 aa18.14■□□□□ 0.49
KDM3A-201ENST00000312912 CCDC43Q96MW1 224 aaKnown RBP18.14■□□□□ 0.49
KDM3A-201ENST00000312912 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
KDM3A-201ENST00000312912 C20orf194Q5TEA3 1177 aa18.13■□□□□ 0.49
KDM3A-201ENST00000312912 KIF6Q6ZMV9 814 aa18.13■□□□□ 0.49
KDM3A-201ENST00000312912 FYB1O15117 783 aa18.12■□□□□ 0.49
KDM3A-201ENST00000312912 PDRG1Q9NUG6 133 aa18.12■□□□□ 0.49
KDM3A-201ENST00000312912 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
KDM3A-201ENST00000312912 TRIM22Q8IYM9 498 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms