RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 CCDC85AQ96PX6 553 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 ZNF692Q9BU19 519 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 CCDC39Q9UFE4 941 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 NINLQ9Y2I6 1382 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 ERICH2A1L162 156 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 RBM33Q96EV2 1170 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 RBM42Q9BTD8 480 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 STRN4Q9NRL3 753 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 IPO7O95373 1038 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 PDCP20941 246 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 PDILTQ8N807 584 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 CYP46A1Q9Y6A2 500 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 LARP1BQ659C4 914 aaKnown RBP8.46□□□□□ -1.05
GAPVD1-203ENST00000312123 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.05
GAPVD1-203ENST00000312123 PROSER2Q86WR7 435 aaPredicted RBP8.46□□□□□ -1.05
GAPVD1-203ENST00000312123 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.05
GAPVD1-203ENST00000312123 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-203ENST00000312123 AACSQ86V21 672 aa8.46□□□□□ -1.06
GAPVD1-203ENST00000312123 RPAP2Q8IXW5 612 aaPredicted RBP8.46□□□□□ -1.06
GAPVD1-203ENST00000312123 JAKMIP1Q96N16 626 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-203ENST00000312123 PTPRKQ15262 1439 aa8.46□□□□□ -1.06
GAPVD1-203ENST00000312123 IDI1Q13907 227 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 FBXO31Q5XUX0 539 aaPredicted RBP8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 MNS1Q8NEH6 495 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 GPRASP1Q5JY77 1395 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 CEP89Q96ST8 783 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 CWC22Q9HCG8 908 aaKnown RBP8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 DISP3Q9P2K9 1392 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 SYCE3A1L190 88 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC173Q0VFZ6 552 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 SMC2O95347 1197 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 ANKRD20A12PQ8NF67 263 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 NOL10Q9BSC4 688 aaKnown RBP8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 PCDHB15Q9Y5E8 787 aa8.45□□□□□ -1.06
GAPVD1-203ENST00000312123 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 SUPT6HQ7KZ85 1726 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 SSFA2P28290 1259 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 STK38Q15208 465 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 BLOC1S2Q6QNY1 142 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 DDX11Q96FC9 970 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 ATAD2Q6PL18 1390 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 ME1P48163 572 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 FKBP4Q02790 459 aaKnown RBP eCLIP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 TSHZ3Q63HK5 1081 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 TNNQ9UQP3 1299 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 RPRD2Q5VT52 1461 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 GDPD2Q9HCC8 539 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 HOOK1Q9UJC3 728 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 KIAA0586Q9BVV6 1533 aa8.44□□□□□ -1.06
GAPVD1-203ENST00000312123 LRPPRCP42704 1394 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 KRT85P78386 507 aa8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 HECW1Q76N89 1606 aa8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 AMOTL1Q8IY63 956 aa8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
GAPVD1-203ENST00000312123 NKTRP30414 1462 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 CAMSAP2Q08AD1 1489 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 MRC2Q9UBG0 1479 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 BTBD11A6QL63 1104 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 TPM2P07951 284 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 CNNM1Q9NRU3 951 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC192P0DO97 292 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 CASTP20810 708 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 RPGRIP1LQ68CZ1 1315 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 OLFM4Q6UX06 510 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC83Q8IWF9 413 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 IFT140Q96RY7 1462 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 NAT10Q9H0A0 1025 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 BOLA2Q9H3K6 86 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 SPINK5Q9NQ38 1064 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 PLEKHH2Q8IVE3 1493 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 MAGI1Q96QZ7 1491 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 MX1P20591 662 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 THEMISQ8N1K5 641 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 TNPO1Q92973 898 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 PDRG1Q9NUG6 133 aa8.42□□□□□ -1.06
GAPVD1-203ENST00000312123 ABCA10Q8WWZ4 1543 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 HIP1O00291 1037 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 CABP4P57796 275 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC47Q96A33 483 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 PTPN23Q9H3S7 1636 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC141Q6ZP82 1450 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 ANXA1P04083 346 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 NAP1L1P55209 391 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 GPS2Q13227 327 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 CAMK4Q16566 473 aa8.41□□□□□ -1.06
GAPVD1-203ENST00000312123 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms