RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NUTM2GQ5VZR2 741 aa11.19□□□□□ -0.62
CHD6-201ENST00000309279 NME9Q86XW9 330 aa11.19□□□□□ -0.62
CHD6-201ENST00000309279 CABLES1Q8TDN4 633 aa11.19□□□□□ -0.62
CHD6-201ENST00000309279 LRP6O75581 1613 aa11.19□□□□□ -0.62
CHD6-201ENST00000309279 SLIT3O75094 1523 aa11.18□□□□□ -0.62
CHD6-201ENST00000309279 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
CHD6-201ENST00000309279 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
CHD6-201ENST00000309279 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
CHD6-201ENST00000309279 PHRF1Q9P1Y6 1649 aaKnown RBP11.17□□□□□ -0.62
CHD6-201ENST00000309279 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
CHD6-201ENST00000309279 KIF20BQ96Q89 1820 aa11.17□□□□□ -0.62
CHD6-201ENST00000309279 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
CHD6-201ENST00000309279 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
CHD6-201ENST00000309279 GCP02774 474 aa11.17□□□□□ -0.62
CHD6-201ENST00000309279 NUTM2AQ8IVF1 878 aaPredicted RBP11.17□□□□□ -0.62
CHD6-201ENST00000309279 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
CHD6-201ENST00000309279 ZRANB1Q9UGI0 708 aa11.17□□□□□ -0.62
CHD6-201ENST00000309279 KCNH5Q8NCM2 988 aa11.16□□□□□ -0.62
CHD6-201ENST00000309279 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
CHD6-201ENST00000309279 COG3Q96JB2 828 aa11.15□□□□□ -0.62
CHD6-201ENST00000309279 GGNBP2Q9H3C7 697 aa11.15□□□□□ -0.62
CHD6-201ENST00000309279 CPDO75976 1380 aa11.15□□□□□ -0.63
CHD6-201ENST00000309279 NSD2O96028 1365 aa11.15□□□□□ -0.63
CHD6-201ENST00000309279 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
CHD6-201ENST00000309279 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
CHD6-201ENST00000309279 NPC1L1Q9UHC9 1359 aa11.14□□□□□ -0.63
CHD6-201ENST00000309279 NFAT5O94916 1531 aa11.14□□□□□ -0.63
CHD6-201ENST00000309279 RAD21O60216 631 aa11.13□□□□□ -0.63
CHD6-201ENST00000309279 ADAMTS2O95450 1211 aa11.13□□□□□ -0.63
CHD6-201ENST00000309279 FAM83GA6ND36 823 aa11.13□□□□□ -0.63
CHD6-201ENST00000309279 ARHGEF25Q86VW2 580 aa11.13□□□□□ -0.63
CHD6-201ENST00000309279 FNBP4Q8N3X1 1017 aaPredicted RBP11.13□□□□□ -0.63
CHD6-201ENST00000309279 KIAA0232Q92628 1395 aa11.12□□□□□ -0.63
CHD6-201ENST00000309279 ZC3H6P61129 1189 aaKnown RBP11.12□□□□□ -0.63
CHD6-201ENST00000309279 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
CHD6-201ENST00000309279 MEX3CQ5U5Q3 659 aaKnown RBP11.12□□□□□ -0.63
CHD6-201ENST00000309279 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
CHD6-201ENST00000309279 SLIT2O94813 1529 aa11.11□□□□□ -0.63
CHD6-201ENST00000309279 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
CHD6-201ENST00000309279 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
CHD6-201ENST00000309279 PRDM11Q9NQV5 511 aa11.11□□□□□ -0.63
CHD6-201ENST00000309279 COL18A1P39060 1754 aa11.11□□□□□ -0.63
CHD6-201ENST00000309279 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
CHD6-201ENST00000309279 LTN1O94822 1766 aa11.1□□□□□ -0.63
CHD6-201ENST00000309279 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
CHD6-201ENST00000309279 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
CHD6-201ENST00000309279 MAP2P11137 1827 aaKnown RBP11.1□□□□□ -0.63
CHD6-201ENST00000309279 LMO7Q8WWI1 1683 aa11.1□□□□□ -0.63
CHD6-201ENST00000309279 BCL9LQ86UU0 1499 aa11.1□□□□□ -0.63
CHD6-201ENST00000309279 ABCC6O95255 1503 aa11.09□□□□□ -0.63
CHD6-201ENST00000309279 PLCH1Q4KWH8 1693 aa11.09□□□□□ -0.63
CHD6-201ENST00000309279 SOX12O15370 315 aa11.09□□□□□ -0.63
CHD6-201ENST00000309279 FBLN1P23142 703 aa11.09□□□□□ -0.63
CHD6-201ENST00000309279 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
CHD6-201ENST00000309279 RGS17Q9UGC6 210 aaPredicted RBP11.09□□□□□ -0.63
CHD6-201ENST00000309279 AFF2P51816 1311 aa11.08□□□□□ -0.64
CHD6-201ENST00000309279 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
CHD6-201ENST00000309279 CHRNA2Q15822 529 aa11.08□□□□□ -0.64
CHD6-201ENST00000309279 CC2D1BQ5T0F9 858 aaKnown RBP11.08□□□□□ -0.64
CHD6-201ENST00000309279 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
CHD6-201ENST00000309279 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
CHD6-201ENST00000309279 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
CHD6-201ENST00000309279 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
CHD6-201ENST00000309279 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 BTG4Q9NY30 223 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 USP21Q9UK80 565 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 RGPD5Q99666 1765 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
CHD6-201ENST00000309279 RRS1Q15050 365 aaKnown RBP11.06□□□□□ -0.64
CHD6-201ENST00000309279 IP6K1Q92551 441 aa11.06□□□□□ -0.64
CHD6-201ENST00000309279 POLKQ9UBT6 870 aa11.06□□□□□ -0.64
CHD6-201ENST00000309279 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.06□□□□□ -0.64
CHD6-201ENST00000309279 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
CHD6-201ENST00000309279 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
CHD6-201ENST00000309279 COL5A2P05997 1499 aaPredicted RBP11.05□□□□□ -0.64
CHD6-201ENST00000309279 PEAK1Q9H792 1746 aa11.05□□□□□ -0.64
CHD6-201ENST00000309279 HOXC9P31274 260 aa11.05□□□□□ -0.64
CHD6-201ENST00000309279 ATRNO75882 1429 aa11.04□□□□□ -0.64
CHD6-201ENST00000309279 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
CHD6-201ENST00000309279 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
CHD6-201ENST00000309279 AMPHP49418 695 aa11.04□□□□□ -0.64
CHD6-201ENST00000309279 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
CHD6-201ENST00000309279 TRPC5Q9UL62 973 aaPredicted RBP11.04□□□□□ -0.64
CHD6-201ENST00000309279 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
CHD6-201ENST00000309279 FLT4P35916 1363 aa11.04□□□□□ -0.64
CHD6-201ENST00000309279 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
CHD6-201ENST00000309279 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
CHD6-201ENST00000309279 VPS72Q15906 364 aa11.03□□□□□ -0.64
CHD6-201ENST00000309279 BRPF3Q9ULD4 1205 aa11.03□□□□□ -0.64
CHD6-201ENST00000309279 EVA1CP58658 441 aa11.02□□□□□ -0.64
CHD6-201ENST00000309279 HSP90AB2PQ58FF8 381 aa11.02□□□□□ -0.64
CHD6-201ENST00000309279 POTEAQ6S8J7 498 aa11.02□□□□□ -0.64
CHD6-201ENST00000309279 ZNF592Q92610 1267 aa11.02□□□□□ -0.64
CHD6-201ENST00000309279 ERBB3P21860 1342 aa11.02□□□□□ -0.64
CHD6-201ENST00000309279 INSRP06213 1382 aa11.02□□□□□ -0.64
CHD6-201ENST00000309279 RALBP1Q15311 655 aa11.02□□□□□ -0.65
CHD6-201ENST00000309279 GJD4Q96KN9 370 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms