RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 CDC42BPGQ6DT37 1551 aa13.34□□□□□ -0.27
KDM2A-201ENST00000308783 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
KDM2A-201ENST00000308783 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.27
KDM2A-201ENST00000308783 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.27
KDM2A-201ENST00000308783 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
KDM2A-201ENST00000308783 RGPD8O14715 1765 aaPredicted RBP13.33□□□□□ -0.28
KDM2A-201ENST00000308783 C20orf194Q5TEA3 1177 aa13.33□□□□□ -0.28
KDM2A-201ENST00000308783 CNPY4Q8N129 248 aa13.33□□□□□ -0.28
KDM2A-201ENST00000308783 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
KDM2A-201ENST00000308783 COG3Q96JB2 828 aa13.32□□□□□ -0.28
KDM2A-201ENST00000308783 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
KDM2A-201ENST00000308783 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
KDM2A-201ENST00000308783 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
KDM2A-201ENST00000308783 HMOX1P09601 288 aa13.31□□□□□ -0.28
KDM2A-201ENST00000308783 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
KDM2A-201ENST00000308783 ADGRB2O60241 1585 aa13.31□□□□□ -0.28
KDM2A-201ENST00000308783 TRMT2AQ8IZ69 625 aaKnown RBP13.31□□□□□ -0.28
KDM2A-201ENST00000308783 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
KDM2A-201ENST00000308783 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
KDM2A-201ENST00000308783 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
KDM2A-201ENST00000308783 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
KDM2A-201ENST00000308783 SETD1BQ9UPS6 1966 aaKnown RBP13.3□□□□□ -0.28
KDM2A-201ENST00000308783 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
KDM2A-201ENST00000308783 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
KDM2A-201ENST00000308783 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
KDM2A-201ENST00000308783 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
KDM2A-201ENST00000308783 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
KDM2A-201ENST00000308783 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
KDM2A-201ENST00000308783 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
KDM2A-201ENST00000308783 BCAR3O75815 825 aa13.29□□□□□ -0.28
KDM2A-201ENST00000308783 AKAP12Q02952 1782 aa13.29□□□□□ -0.28
KDM2A-201ENST00000308783 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
KDM2A-201ENST00000308783 USP6P35125 1406 aa13.28□□□□□ -0.28
KDM2A-201ENST00000308783 TOPAZ1Q8N9V7 1692 aa13.28□□□□□ -0.28
KDM2A-201ENST00000308783 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.28
KDM2A-201ENST00000308783 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
KDM2A-201ENST00000308783 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
KDM2A-201ENST00000308783 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 TMPOP42166 694 aaKnown RBP13.26□□□□□ -0.29
KDM2A-201ENST00000308783 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 NFKBIBQ15653 356 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 IL13P35225 146 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 HSPA2P54652 639 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
KDM2A-201ENST00000308783 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
KDM2A-201ENST00000308783 PATL2C9JE40 543 aaKnown RBP13.25□□□□□ -0.29
KDM2A-201ENST00000308783 NPHP4O75161 1426 aaPredicted RBP13.25□□□□□ -0.29
KDM2A-201ENST00000308783 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
KDM2A-201ENST00000308783 DNTTIP2Q5QJE6 756 aaKnown RBP13.25□□□□□ -0.29
KDM2A-201ENST00000308783 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
KDM2A-201ENST00000308783 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
KDM2A-201ENST00000308783 RIPK4P57078 832 aa13.24□□□□□ -0.29
KDM2A-201ENST00000308783 HSP90AB2PQ58FF8 381 aa13.24□□□□□ -0.29
KDM2A-201ENST00000308783 NRKQ7Z2Y5 1582 aa13.24□□□□□ -0.29
KDM2A-201ENST00000308783 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
KDM2A-201ENST00000308783 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
KDM2A-201ENST00000308783 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
KDM2A-201ENST00000308783 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
KDM2A-201ENST00000308783 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
KDM2A-201ENST00000308783 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
KDM2A-201ENST00000308783 OVOS2A0A0J9YW53 1432 aa13.23□□□□□ -0.29
KDM2A-201ENST00000308783 OVOS2Q6IE36 1432 aa13.23□□□□□ -0.29
KDM2A-201ENST00000308783 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
KDM2A-201ENST00000308783 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
KDM2A-201ENST00000308783 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
KDM2A-201ENST00000308783 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
KDM2A-201ENST00000308783 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
KDM2A-201ENST00000308783 FCHSD2O94868 740 aa13.21□□□□□ -0.29
KDM2A-201ENST00000308783 NLRP6P59044 892 aa13.21□□□□□ -0.29
KDM2A-201ENST00000308783 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.29
KDM2A-201ENST00000308783 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
KDM2A-201ENST00000308783 WDR63Q8IWG1 891 aa13.21□□□□□ -0.29
KDM2A-201ENST00000308783 APPP05067 770 aa13.21□□□□□ -0.3
KDM2A-201ENST00000308783 CERS3Q8IU89 383 aa13.21□□□□□ -0.3
KDM2A-201ENST00000308783 NGEFQ8N5V2 710 aa13.21□□□□□ -0.3
KDM2A-201ENST00000308783 DDRGK1Q96HY6 314 aa13.21□□□□□ -0.3
KDM2A-201ENST00000308783 ORAI2Q96SN7 254 aa13.21□□□□□ -0.3
KDM2A-201ENST00000308783 CDK12Q9NYV4 1490 aaPredicted RBP13.2□□□□□ -0.3
KDM2A-201ENST00000308783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
KDM2A-201ENST00000308783 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
KDM2A-201ENST00000308783 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
KDM2A-201ENST00000308783 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
KDM2A-201ENST00000308783 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
KDM2A-201ENST00000308783 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
KDM2A-201ENST00000308783 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
KDM2A-201ENST00000308783 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
KDM2A-201ENST00000308783 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
KDM2A-201ENST00000308783 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
KDM2A-201ENST00000308783 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
KDM2A-201ENST00000308783 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
KDM2A-201ENST00000308783 FOXO3O43524 673 aa13.18□□□□□ -0.3
KDM2A-201ENST00000308783 DCTN1Q14203 1278 aa13.18□□□□□ -0.3
KDM2A-201ENST00000308783 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
KDM2A-201ENST00000308783 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
KDM2A-201ENST00000308783 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
KDM2A-201ENST00000308783 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
KDM2A-201ENST00000308783 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
KDM2A-201ENST00000308783 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
KDM2A-201ENST00000308783 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms