RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 DDX23Q9BUQ8 820 aaKnown RBP18.64■□□□□ 0.57
PPM1E-201ENST00000308249 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
PPM1E-201ENST00000308249 CTNNBL1Q8WYA6 563 aaPredicted RBP18.64■□□□□ 0.57
PPM1E-201ENST00000308249 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
PPM1E-201ENST00000308249 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
PPM1E-201ENST00000308249 DNA2P51530 1060 aa18.63■□□□□ 0.57
PPM1E-201ENST00000308249 SF3B2Q13435 895 aaKnown RBP18.63■□□□□ 0.57
PPM1E-201ENST00000308249 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.63■□□□□ 0.57
PPM1E-201ENST00000308249 CBFA2T2O43439 604 aa18.63■□□□□ 0.57
PPM1E-201ENST00000308249 POTEJP0CG39 1038 aa18.63■□□□□ 0.57
PPM1E-201ENST00000308249 NOL7Q9UMY1 257 aaKnown RBP18.63■□□□□ 0.57
PPM1E-201ENST00000308249 UQCRHLA0A096LP55 91 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 GSTTP1A0A1W2PQM5 241 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 UQCRHP07919 91 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 PPM1EQ8WY54 764 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 CARMIL2Q6F5E8 1435 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
PPM1E-201ENST00000308249 CCDC57Q2TAC2 916 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 TMCO3Q6UWJ1 677 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 MACROD2A1Z1Q3 448 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 FILIP1Q7Z7B0 1213 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
PPM1E-201ENST00000308249 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
PPM1E-201ENST00000308249 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
PPM1E-201ENST00000308249 HIP1O00291 1037 aa18.61■□□□□ 0.57
PPM1E-201ENST00000308249 CETN2P41208 172 aa18.6■□□□□ 0.57
PPM1E-201ENST00000308249 TNNT1P13805 278 aa18.6■□□□□ 0.57
PPM1E-201ENST00000308249 CYP46A1Q9Y6A2 500 aa18.6■□□□□ 0.57
PPM1E-201ENST00000308249 CCDC178Q5BJE1 867 aa18.59■□□□□ 0.57
PPM1E-201ENST00000308249 CRACR2AQ9BSW2 395 aa18.59■□□□□ 0.57
PPM1E-201ENST00000308249 DHX8Q14562 1220 aaKnown RBP18.59■□□□□ 0.57
PPM1E-201ENST00000308249 ARHGAP29Q52LW3 1261 aa18.59■□□□□ 0.57
PPM1E-201ENST00000308249 CEP57L1Q8IYX8 460 aa18.59■□□□□ 0.57
PPM1E-201ENST00000308249 CCDC148Q8NFR7 591 aa18.59■□□□□ 0.57
PPM1E-201ENST00000308249 FKBP4Q02790 459 aaKnown RBP eCLIP18.59■□□□□ 0.57
PPM1E-201ENST00000308249 SHTN1A0MZ66 631 aa18.58■□□□□ 0.57
PPM1E-201ENST00000308249 RNF187Q5TA31 235 aaPredicted RBP18.58■□□□□ 0.57
PPM1E-201ENST00000308249 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.57
PPM1E-201ENST00000308249 CUX2O14529 1486 aa18.58■□□□□ 0.56
PPM1E-201ENST00000308249 IFFO1Q0D2I5 559 aa18.58■□□□□ 0.56
PPM1E-201ENST00000308249 CCDC30Q5VVM6 783 aa18.57■□□□□ 0.56
PPM1E-201ENST00000308249 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
PPM1E-201ENST00000308249 GGNBP2Q9H3C7 697 aa18.57■□□□□ 0.56
PPM1E-201ENST00000308249 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
PPM1E-201ENST00000308249 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
PPM1E-201ENST00000308249 LARP1BQ659C4 914 aaKnown RBP18.57■□□□□ 0.56
PPM1E-201ENST00000308249 GNAI3P08754 354 aa18.56■□□□□ 0.56
PPM1E-201ENST00000308249 TDO2P48775 406 aa18.56■□□□□ 0.56
PPM1E-201ENST00000308249 ZNF397Q8NF99 534 aaPredicted RBP18.56■□□□□ 0.56
PPM1E-201ENST00000308249 LIG1P18858 919 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
PPM1E-201ENST00000308249 LARP1Q6PKG0 1096 aaKnown RBP18.55■□□□□ 0.56
PPM1E-201ENST00000308249 IPO4Q8TEX9 1081 aaKnown RBP18.55■□□□□ 0.56
PPM1E-201ENST00000308249 TMX1Q9H3N1 280 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 HOOK3Q86VS8 718 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 PLCD3Q8N3E9 789 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 KRT85P78386 507 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 SPATA32Q96LK8 384 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 TRERF1Q96PN7 1200 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
PPM1E-201ENST00000308249 NLRP6P59044 892 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 SPATA24Q86W54 205 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 MPHOSPH8Q99549 860 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
PPM1E-201ENST00000308249 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
PPM1E-201ENST00000308249 MCM2P49736 904 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 CFAP100Q494V2 611 aa18.54■□□□□ 0.56
PPM1E-201ENST00000308249 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
PPM1E-201ENST00000308249 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
PPM1E-201ENST00000308249 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
PPM1E-201ENST00000308249 UBXN4Q92575 508 aa18.53■□□□□ 0.56
PPM1E-201ENST00000308249 SPA17Q15506 151 aa18.53■□□□□ 0.56
PPM1E-201ENST00000308249 LUZP1Q86V48 1076 aa18.53■□□□□ 0.56
PPM1E-201ENST00000308249 RAI14Q9P0K7 980 aa18.53■□□□□ 0.56
PPM1E-201ENST00000308249 GPATCH11Q8N954 259 aa18.53■□□□□ 0.56
PPM1E-201ENST00000308249 PPP1R12BO60237 982 aaPredicted RBP18.53■□□□□ 0.56
PPM1E-201ENST00000308249 CTNNA2P26232 953 aa18.52■□□□□ 0.56
PPM1E-201ENST00000308249 WDR78Q5VTH9 848 aa18.52■□□□□ 0.56
PPM1E-201ENST00000308249 MYL6BP14649 208 aa18.52■□□□□ 0.56
PPM1E-201ENST00000308249 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.56
PPM1E-201ENST00000308249 DNAI2Q9GZS0 605 aa18.52■□□□□ 0.56
PPM1E-201ENST00000308249 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
PPM1E-201ENST00000308249 PRDM10Q9NQV6 1147 aa18.52■□□□□ 0.55
PPM1E-201ENST00000308249 HOMER2Q9NSB8 354 aa18.52■□□□□ 0.55
PPM1E-201ENST00000308249 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
PPM1E-201ENST00000308249 ANKRD1Q15327 319 aa18.51■□□□□ 0.55
PPM1E-201ENST00000308249 PPP4R3AQ6IN85 833 aa18.51■□□□□ 0.55
PPM1E-201ENST00000308249 PABPN1LA6NDY0 278 aaKnown RBP18.5■□□□□ 0.55
PPM1E-201ENST00000308249 CAMK4Q16566 473 aa18.5■□□□□ 0.55
PPM1E-201ENST00000308249 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
PPM1E-201ENST00000308249 TRMT1LQ7Z2T5 733 aaKnown RBP18.5■□□□□ 0.55
PPM1E-201ENST00000308249 CACNA2D4Q7Z3S7 1137 aa18.5■□□□□ 0.55
PPM1E-201ENST00000308249 GNAI2P04899 355 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms