RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 NCAPGQ9BPX3 1015 aa9.49□□□□□ -0.89
PCNX1-201ENST00000304743 LRRCC1Q9C099 1032 aa9.49□□□□□ -0.89
PCNX1-201ENST00000304743 FSD2A1L4K1 749 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
PCNX1-201ENST00000304743 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 TAF4BQ92750 862 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 FAM13BQ9NYF5 915 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 APBB1IPQ7Z5R6 666 aaPredicted RBP9.48□□□□□ -0.89
PCNX1-201ENST00000304743 CNNM1Q9NRU3 951 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 ALS2CR12Q96Q35 445 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
PCNX1-201ENST00000304743 CEP57L1Q8IYX8 460 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 KIF4AO95239 1232 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 GMNNO75496 209 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 PPP1R14CQ8TAE6 165 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 PDE3BQ13370 1112 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 NFKBIBQ15653 356 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 EP400NLQ6ZTU2 488 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 KINO60870 393 aaKnown RBP9.47□□□□□ -0.89
PCNX1-201ENST00000304743 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
PCNX1-201ENST00000304743 IKBKGQ9Y6K9 419 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 GTF2F1P35269 517 aaKnown RBP eCLIP9.47□□□□□ -0.89
PCNX1-201ENST00000304743 CUL4BQ13620 913 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 HAUS7Q99871 368 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 NAP1L3Q99457 506 aaPredicted RBP9.47□□□□□ -0.89
PCNX1-201ENST00000304743 NACAP1Q9BZK3 213 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 DYNC1I1O14576 645 aa9.47□□□□□ -0.89
PCNX1-201ENST00000304743 ELL2O00472 640 aaPredicted RBP9.46□□□□□ -0.89
PCNX1-201ENST00000304743 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.89
PCNX1-201ENST00000304743 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.89
PCNX1-201ENST00000304743 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.46□□□□□ -0.89
PCNX1-201ENST00000304743 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.89
PCNX1-201ENST00000304743 FAM193AP78312 1265 aa9.46□□□□□ -0.89
PCNX1-201ENST00000304743 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.89
PCNX1-201ENST00000304743 CRACR2BQ8N4Y2 399 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-201ENST00000304743 ZNF397Q8NF99 534 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-201ENST00000304743 SERPINC1P01008 464 aa9.46□□□□□ -0.9
PCNX1-201ENST00000304743 CCDC158Q5M9N0 1113 aa9.46□□□□□ -0.9
PCNX1-201ENST00000304743 DDX46Q7L014 1031 aaKnown RBP9.46□□□□□ -0.9
PCNX1-201ENST00000304743 TAOK3Q9H2K8 898 aa9.46□□□□□ -0.9
PCNX1-201ENST00000304743 SRCIN1Q9C0H9 1055 aa9.46□□□□□ -0.9
PCNX1-201ENST00000304743 CLGNO14967 610 aa9.46□□□□□ -0.9
PCNX1-201ENST00000304743 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.9
PCNX1-201ENST00000304743 JMYQ8N9B5 988 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 VPS36Q86VN1 386 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 FMNL2Q96PY5 1086 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 DNAJC2Q99543 621 aaKnown RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 FKBP5Q13451 457 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 NOL7Q9UMY1 257 aaKnown RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 NUTM2BA6NNL0 878 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 NUTM2EB1AL46 878 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 PSMA5P28066 241 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 NUTM2AQ8IVF1 878 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 XRCC6P12956 609 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 PFDN4Q9NQP4 134 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 CIZ1Q9ULV3 898 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 CETN1Q12798 172 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 ANAPC4Q9UJX5 808 aa9.45□□□□□ -0.9
PCNX1-201ENST00000304743 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 ERCC5P28715 1186 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-201ENST00000304743 CCDC69A6NI79 296 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 CEP112Q8N8E3 955 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 ANKFY1Q9P2R3 1169 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 MPHOSPH8Q99549 860 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 LPXNO60711 386 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 CUL5Q93034 780 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 KIF5AQ12840 1032 aa9.44□□□□□ -0.9
PCNX1-201ENST00000304743 BRPF3Q9ULD4 1205 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 PIP4K2BP78356 416 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
PCNX1-201ENST00000304743 DHX8Q14562 1220 aaKnown RBP9.43□□□□□ -0.9
PCNX1-201ENST00000304743 CFAP70Q5T0N1 1121 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 KIAA1328Q86T90 577 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 CCDC180Q9P1Z9 1646 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 KIF4BQ2VIQ3 1234 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 FBF1Q8TES7 1133 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 SEC63Q9UGP8 760 aaKnown RBP9.43□□□□□ -0.9
PCNX1-201ENST00000304743 KIF3CO14782 793 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 IFFO1Q0D2I5 559 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 STRN4Q9NRL3 753 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 ROCK1Q13464 1354 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 LIG1P18858 919 aa9.43□□□□□ -0.9
PCNX1-201ENST00000304743 EIF5P55010 431 aaKnown RBP9.42□□□□□ -0.9
PCNX1-201ENST00000304743 SYNCQ9H7C4 482 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 RCAN3Q9UKA8 241 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 EHMT1Q9H9B1 1298 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 DIAPH1O60610 1272 aaKnown RBP9.42□□□□□ -0.9
PCNX1-201ENST00000304743 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 FEZ2Q9UHY8 353 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-201ENST00000304743 IMMTQ16891 758 aaKnown RBP9.42□□□□□ -0.9
PCNX1-201ENST00000304743 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms