RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 KIF6Q6ZMV9 814 aa25.1■■□□□ 1.61
LETM1-201ENST00000302787 NFE2L2Q16236 605 aa25.1■■□□□ 1.61
LETM1-201ENST00000302787 SIL1Q9H173 461 aa25.1■■□□□ 1.61
LETM1-201ENST00000302787 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
LETM1-201ENST00000302787 STK3Q13188 491 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 PRM3Q9NNZ6 103 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 RUFY1Q96T51 708 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 CCDC192P0DO97 292 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 ATP2B1P20020 1258 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 TTC39AQ5SRH9 613 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 SPC24Q8NBT2 197 aa25.09■■□□□ 1.61
LETM1-201ENST00000302787 RPAP2Q8IXW5 612 aaPredicted RBP25.09■■□□□ 1.61
LETM1-201ENST00000302787 CCDC158Q5M9N0 1113 aa25.08■■□□□ 1.61
LETM1-201ENST00000302787 ZNF530Q6P9A1 599 aaPredicted RBP25.08■■□□□ 1.61
LETM1-201ENST00000302787 TATP17735 454 aaPredicted RBP25.08■■□□□ 1.61
LETM1-201ENST00000302787 AK7Q96M32 723 aa25.07■■□□□ 1.6
LETM1-201ENST00000302787 HSP90B2PQ58FF3 399 aa25.07■■□□□ 1.6
LETM1-201ENST00000302787 HMGN5P82970 282 aaKnown RBP25.07■■□□□ 1.6
LETM1-201ENST00000302787 C20orf194Q5TEA3 1177 aa25.07■■□□□ 1.6
LETM1-201ENST00000302787 MTMR7Q9Y216 660 aa25.06■■□□□ 1.6
LETM1-201ENST00000302787 CAMSAP2Q08AD1 1489 aa25.06■■□□□ 1.6
LETM1-201ENST00000302787 TNMDQ9H2S6 317 aa25.06■■□□□ 1.6
LETM1-201ENST00000302787 SRGAP3O43295 1099 aa25.05■■□□□ 1.6
LETM1-201ENST00000302787 KRT85P78386 507 aa25.05■■□□□ 1.6
LETM1-201ENST00000302787 FAM177BA6PVY3 158 aa25.05■■□□□ 1.6
LETM1-201ENST00000302787 CCDC141Q6ZP82 1450 aa25.05■■□□□ 1.6
LETM1-201ENST00000302787 CCDC43Q96MW1 224 aaKnown RBP25.05■■□□□ 1.6
LETM1-201ENST00000302787 RRP12Q5JTH9 1297 aaKnown RBP25.04■■□□□ 1.6
LETM1-201ENST00000302787 LARP1BQ659C4 914 aaKnown RBP25.04■■□□□ 1.6
LETM1-201ENST00000302787 RBM42Q9BTD8 480 aaKnown RBP25.04■■□□□ 1.6
LETM1-201ENST00000302787 CCP110O43303 1012 aa25.04■■□□□ 1.6
LETM1-201ENST00000302787 AACSQ86V21 672 aa25.04■■□□□ 1.6
LETM1-201ENST00000302787 KIAA0586Q9BVV6 1533 aa25.03■■□□□ 1.6
LETM1-201ENST00000302787 ABCC5O15440 1437 aa25.03■■□□□ 1.6
LETM1-201ENST00000302787 RARSP54136 660 aaKnown RBP25.03■■□□□ 1.6
LETM1-201ENST00000302787 CNNM1Q9NRU3 951 aa25.03■■□□□ 1.6
LETM1-201ENST00000302787 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
LETM1-201ENST00000302787 TTLL5Q6EMB2 1281 aa25.03■■□□□ 1.6
LETM1-201ENST00000302787 PDRG1Q9NUG6 133 aa25.03■■□□□ 1.6
LETM1-201ENST00000302787 NKTRP30414 1462 aaKnown RBP25.03■■□□□ 1.6
LETM1-201ENST00000302787 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.02■■□□□ 1.62e-6■□□□□ 11.2
LETM1-201ENST00000302787 IL1RAPL2Q9NP60 686 aa25.02■■□□□ 1.6
LETM1-201ENST00000302787 FILIP1LQ4L180 1135 aa25.02■■□□□ 1.6
LETM1-201ENST00000302787 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
LETM1-201ENST00000302787 CAGE1Q8TC20 777 aa25.02■■□□□ 1.6
LETM1-201ENST00000302787 IQGAP2Q13576 1575 aa25.01■■□□□ 1.59
LETM1-201ENST00000302787 CWC27Q6UX04 472 aaKnown RBP25.01■■□□□ 1.59
LETM1-201ENST00000302787 MAP3K1Q13233 1512 aa25.01■■□□□ 1.59
LETM1-201ENST00000302787 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
LETM1-201ENST00000302787 EPS15P42566 896 aa25.01■■□□□ 1.59
LETM1-201ENST00000302787 BLOC1S2Q6QNY1 142 aa25.01■■□□□ 1.59
LETM1-201ENST00000302787 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
LETM1-201ENST00000302787 SKAP1Q86WV1 359 aa25.01■■□□□ 1.59
LETM1-201ENST00000302787 CABP4P57796 275 aa25■■□□□ 1.59
LETM1-201ENST00000302787 ZSCAN31Q96LW9 406 aaPredicted RBP25■■□□□ 1.59
LETM1-201ENST00000302787 JAKMIP1Q96N16 626 aaKnown RBP25■■□□□ 1.59
LETM1-201ENST00000302787 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
LETM1-201ENST00000302787 MYL6BP14649 208 aa25■■□□□ 1.59
LETM1-201ENST00000302787 ME1P48163 572 aa25■■□□□ 1.59
LETM1-201ENST00000302787 RBM10P98175 930 aaKnown RBP25■■□□□ 1.59
LETM1-201ENST00000302787 OFD1O75665 1012 aa24.99■■□□□ 1.59
LETM1-201ENST00000302787 NCOA1Q15788 1441 aa24.99■■□□□ 1.59
LETM1-201ENST00000302787 MPNDQ8N594 471 aa24.99■■□□□ 1.59
LETM1-201ENST00000302787 SMARCE1Q969G3 411 aa24.99■■□□□ 1.59
LETM1-201ENST00000302787 PATL2C9JE40 543 aaKnown RBP24.99■■□□□ 1.59
LETM1-201ENST00000302787 RAPGEF3O95398 923 aa24.99■■□□□ 1.59
LETM1-201ENST00000302787 THEMISQ8N1K5 641 aaPredicted RBP24.99■■□□□ 1.59
LETM1-201ENST00000302787 CDR1P51861 262 aa24.98■■□□□ 1.59
LETM1-201ENST00000302787 SSH1Q8WYL5 1049 aa24.98■■□□□ 1.59
LETM1-201ENST00000302787 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
LETM1-201ENST00000302787 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
LETM1-201ENST00000302787 SLC3A2P08195 630 aaKnown RBP24.98■■□□□ 1.59
LETM1-201ENST00000302787 SAMD1Q6SPF0 538 aaPredicted RBP24.98■■□□□ 1.59
LETM1-201ENST00000302787 TXLNAP40222 546 aa24.97■■□□□ 1.59
LETM1-201ENST00000302787 BTBD11A6QL63 1104 aa24.97■■□□□ 1.59
LETM1-201ENST00000302787 SPG7Q9UQ90 795 aa24.97■■□□□ 1.59
LETM1-201ENST00000302787 SERPINC1P01008 464 aa24.96■■□□□ 1.59
LETM1-201ENST00000302787 ALDH1L2Q3SY69 923 aa24.96■■□□□ 1.59
LETM1-201ENST00000302787 SPATA32Q96LK8 384 aa24.96■■□□□ 1.59
LETM1-201ENST00000302787 BRPF1P55201 1214 aaPredicted RBP24.96■■□□□ 1.59
LETM1-201ENST00000302787 ERCC4Q92889 916 aaPredicted RBP24.96■■□□□ 1.59
LETM1-201ENST00000302787 EXOC6BQ9Y2D4 811 aa24.96■■□□□ 1.59
LETM1-201ENST00000302787 MEX3CQ5U5Q3 659 aaKnown RBP24.95■■□□□ 1.59
LETM1-201ENST00000302787 NUDT16Q96DE0 195 aaKnown RBP24.95■■□□□ 1.59
LETM1-201ENST00000302787 MAGEC2Q9UBF1 373 aaPredicted RBP24.95■■□□□ 1.58
LETM1-201ENST00000302787 NUTM1Q86Y26 1132 aa24.95■■□□□ 1.58
LETM1-201ENST00000302787 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
LETM1-201ENST00000302787 CT47A1Q5JQC4 288 aaPredicted RBP24.94■■□□□ 1.58
LETM1-201ENST00000302787 ABCC11Q96J66 1382 aa24.94■■□□□ 1.58
LETM1-201ENST00000302787 PIP4K2AP48426 406 aaPredicted RBP24.94■■□□□ 1.58
LETM1-201ENST00000302787 TRIM22Q8IYM9 498 aa24.94■■□□□ 1.58
LETM1-201ENST00000302787 ESPNB1AK53 854 aa24.93■■□□□ 1.58
LETM1-201ENST00000302787 DHX8Q14562 1220 aaKnown RBP24.93■■□□□ 1.58
LETM1-201ENST00000302787 SLC26A8Q96RN1 970 aa24.93■■□□□ 1.58
LETM1-201ENST00000302787 GNAT3A8MTJ3 354 aa24.93■■□□□ 1.58
LETM1-201ENST00000302787 PPP6R1Q9UPN7 881 aa24.93■■□□□ 1.58
LETM1-201ENST00000302787 GNL3LQ9NVN8 582 aaKnown RBP24.93■■□□□ 1.58
LETM1-201ENST00000302787 MIS18AQ9NYP9 233 aa24.93■■□□□ 1.58
LETM1-201ENST00000302787 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
LETM1-201ENST00000302787 CUL7Q14999 1698 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms