RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 WDR17Q8IZU2 1322 aa25.63■■□□□ 1.69
TMEM88-201ENST00000301599 CD163L1Q9NR16 1453 aa25.63■■□□□ 1.69
TMEM88-201ENST00000301599 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
TMEM88-201ENST00000301599 CSB-PGBD3P0DP91 1061 aa25.62■■□□□ 1.69
TMEM88-201ENST00000301599 C11orf95C9JLR9 678 aaPredicted RBP25.61■■□□□ 1.69
TMEM88-201ENST00000301599 EDC4Q6P2E9 1401 aaKnown RBP25.6■■□□□ 1.69
TMEM88-201ENST00000301599 NINLQ9Y2I6 1382 aa25.59■■□□□ 1.69
TMEM88-201ENST00000301599 TMF1P82094 1093 aa25.59■■□□□ 1.69
TMEM88-201ENST00000301599 CDCA7Q9BWT1 371 aaPredicted RBP25.59■■□□□ 1.69
TMEM88-201ENST00000301599 CARD10Q9BWT7 1032 aa25.59■■□□□ 1.69
TMEM88-201ENST00000301599 COL18A1P39060 1754 aa25.59■■□□□ 1.69
TMEM88-201ENST00000301599 A0A1W2PP64 1363 aa25.58■■□□□ 1.69
TMEM88-201ENST00000301599 MON2Q7Z3U7 1717 aa25.58■■□□□ 1.69
TMEM88-201ENST00000301599 APBA3O96018 575 aa25.58■■□□□ 1.69
TMEM88-201ENST00000301599 DDB1Q16531 1140 aa25.58■■□□□ 1.69
TMEM88-201ENST00000301599 USP47Q96K76 1375 aa25.56■■□□□ 1.68
TMEM88-201ENST00000301599 RGPD1P0DJD0 1748 aa25.56■■□□□ 1.68
TMEM88-201ENST00000301599 DISP2A7MBM2 1401 aa25.55■■□□□ 1.68
TMEM88-201ENST00000301599 NFAT5O94916 1531 aa25.55■■□□□ 1.68
TMEM88-201ENST00000301599 CAMKK2Q96RR4 588 aa25.55■■□□□ 1.68
TMEM88-201ENST00000301599 EZH2Q15910 746 aaKnown RBP25.54■■□□□ 1.68
TMEM88-201ENST00000301599 CDCA8Q53HL2 280 aa25.54■■□□□ 1.68
TMEM88-201ENST00000301599 EXOC5O00471 708 aa25.5■■□□□ 1.67
TMEM88-201ENST00000301599 COG3Q96JB2 828 aa25.5■■□□□ 1.67
TMEM88-201ENST00000301599 CCDC7Q96M83 1385 aa25.5■■□□□ 1.67
TMEM88-201ENST00000301599 PARP4Q9UKK3 1724 aaKnown RBP25.49■■□□□ 1.67
TMEM88-201ENST00000301599 NLRP2Q9NX02 1062 aa25.49■■□□□ 1.67
TMEM88-201ENST00000301599 ABCC6O95255 1503 aa25.48■■□□□ 1.67
TMEM88-201ENST00000301599 PARD3Q8TEW0 1356 aa25.48■■□□□ 1.67
TMEM88-201ENST00000301599 PSDA5PKW4 1024 aaPredicted RBP25.48■■□□□ 1.67
TMEM88-201ENST00000301599 ANKRD36BQ8N2N9 1353 aa25.47■■□□□ 1.67
TMEM88-201ENST00000301599 OVOS2A0A0G2JMS6 1433 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 OVOS2A0A0J9YW53 1432 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 OVOS2Q6IE36 1432 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 RGPD5Q99666 1765 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 USP54Q70EL1 1684 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 ERBB3P21860 1342 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 MARCH10Q8NA82 808 aaPredicted RBP25.46■■□□□ 1.67
TMEM88-201ENST00000301599 ANKRD24Q8TF21 1146 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 IP6K1Q92551 441 aa25.46■■□□□ 1.67
TMEM88-201ENST00000301599 TNS1Q9HBL0 1735 aaKnown RBP25.45■■□□□ 1.66
TMEM88-201ENST00000301599 R3HDM1Q15032 1099 aaKnown RBP25.44■■□□□ 1.66
TMEM88-201ENST00000301599 CCER1Q8TC90 406 aaPredicted RBP25.44■■□□□ 1.66
TMEM88-201ENST00000301599 BCL11BQ9C0K0 894 aaPredicted RBP25.43■■□□□ 1.66
TMEM88-201ENST00000301599 SRCAPQ6ZRS2 3230 aa25.42■■□□□ 1.66
TMEM88-201ENST00000301599 FYB1O15117 783 aa25.42■■□□□ 1.66
TMEM88-201ENST00000301599 NBPF14Q5TI25 921 aa25.42■■□□□ 1.66
TMEM88-201ENST00000301599 PLSCR1O15162 318 aa25.4■■□□□ 1.66
TMEM88-201ENST00000301599 IL2RBP14784 551 aa25.4■■□□□ 1.66
TMEM88-201ENST00000301599 AMPHP49418 695 aa25.4■■□□□ 1.66
TMEM88-201ENST00000301599 LRRC37A3O60309 1634 aa25.39■■□□□ 1.66
TMEM88-201ENST00000301599 BCL9O00512 1426 aa25.38■■□□□ 1.65
TMEM88-201ENST00000301599 FBLN1P23142 703 aa25.38■■□□□ 1.65
TMEM88-201ENST00000301599 GGNBP2Q9H3C7 697 aa25.38■■□□□ 1.65
TMEM88-201ENST00000301599 MAP3K19Q56UN5 1328 aa25.37■■□□□ 1.65
TMEM88-201ENST00000301599 LTV1Q96GA3 475 aaPredicted RBP25.37■■□□□ 1.65
TMEM88-201ENST00000301599 LTN1O94822 1766 aa25.36■■□□□ 1.65
TMEM88-201ENST00000301599 HOXC9P31274 260 aa25.36■■□□□ 1.65
TMEM88-201ENST00000301599 PEAK1Q9H792 1746 aa25.36■■□□□ 1.65
TMEM88-201ENST00000301599 PTF1AQ7RTS3 328 aa25.34■■□□□ 1.65
TMEM88-201ENST00000301599 CARD14Q9BXL6 1004 aa25.32■■□□□ 1.64
TMEM88-201ENST00000301599 WNK3Q9BYP7 1800 aa25.32■■□□□ 1.64
TMEM88-201ENST00000301599 TNS2Q63HR2 1409 aa25.31■■□□□ 1.64
TMEM88-201ENST00000301599 EIF4G2P78344 907 aaKnown RBP eCLIP25.31■■□□□ 1.64
TMEM88-201ENST00000301599 RRS1Q15050 365 aaKnown RBP25.31■■□□□ 1.64
TMEM88-201ENST00000301599 SBF2Q86WG5 1849 aa25.28■■□□□ 1.64
TMEM88-201ENST00000301599 KCNQ2O43526 872 aa25.28■■□□□ 1.64
TMEM88-201ENST00000301599 PROM2Q8N271 834 aa25.27■■□□□ 1.64
TMEM88-201ENST00000301599 POLR3GLQ9BT43 218 aa25.27■■□□□ 1.64
TMEM88-201ENST00000301599 ACSBG1Q96GR2 724 aa25.26■■□□□ 1.63
TMEM88-201ENST00000301599 RTL1A6NKG5 1358 aa25.26■■□□□ 1.63
TMEM88-201ENST00000301599 RREB1Q92766 1687 aa25.26■■□□□ 1.63
TMEM88-201ENST00000301599 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
TMEM88-201ENST00000301599 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
TMEM88-201ENST00000301599 LRP5O75197 1615 aa25.24■■□□□ 1.63
TMEM88-201ENST00000301599 TXNRD1Q16881 649 aa25.24■■□□□ 1.63
TMEM88-201ENST00000301599 NBPF6Q5VWK0 638 aa25.23■■□□□ 1.63
TMEM88-201ENST00000301599 NBPF4Q96M43 638 aa25.23■■□□□ 1.63
TMEM88-201ENST00000301599 NSD3Q9BZ95 1437 aa25.22■■□□□ 1.63
TMEM88-201ENST00000301599 HSP90AB2PQ58FF8 381 aa25.22■■□□□ 1.63
TMEM88-201ENST00000301599 ZCRB1Q8TBF4 217 aaKnown RBP25.22■■□□□ 1.63
TMEM88-201ENST00000301599 KIF24Q5T7B8 1368 aa25.21■■□□□ 1.63
TMEM88-201ENST00000301599 NUP188Q5SRE5 1749 aa25.21■■□□□ 1.63
TMEM88-201ENST00000301599 CGNL1Q0VF96 1302 aa25.21■■□□□ 1.63
TMEM88-201ENST00000301599 FAM208AQ9UK61 1670 aaKnown RBP25.2■■□□□ 1.62
TMEM88-201ENST00000301599 INSRP06213 1382 aa25.19■■□□□ 1.62
TMEM88-201ENST00000301599 SMG6Q86US8 1419 aaKnown RBP25.19■■□□□ 1.62
TMEM88-201ENST00000301599 RGPD3A6NKT7 1758 aaPredicted RBP25.18■■□□□ 1.62
TMEM88-201ENST00000301599 RGPD4Q7Z3J3 1758 aa25.18■■□□□ 1.62
TMEM88-201ENST00000301599 FLT4P35916 1363 aa25.18■■□□□ 1.62
TMEM88-201ENST00000301599 RAPGEF4Q8WZA2 1011 aa25.17■■□□□ 1.62
TMEM88-201ENST00000301599 SPON1Q9HCB6 807 aa25.17■■□□□ 1.62
TMEM88-201ENST00000301599 ANO8Q9HCE9 1232 aaPredicted RBP25.16■■□□□ 1.62
TMEM88-201ENST00000301599 STK32BQ9NY57 414 aa25.16■■□□□ 1.62
TMEM88-201ENST00000301599 EMILIN1Q9Y6C2 1016 aa25.16■■□□□ 1.62
TMEM88-201ENST00000301599 MYOM1P52179 1685 aa25.16■■□□□ 1.62
TMEM88-201ENST00000301599 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
TMEM88-201ENST00000301599 USHBP1Q8N6Y0 703 aa25.15■■□□□ 1.62
TMEM88-201ENST00000301599 KIF20BQ96Q89 1820 aa25.14■■□□□ 1.62
TMEM88-201ENST00000301599 TATP17735 454 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms