RNA–Protein interactions for RNA: ENST00000299608.6

TMX3-201, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMX3, Length 4,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-201ENST00000299608 NINLQ9Y2I6 1382 aa12.87□□□□□ -0.35
TMX3-201ENST00000299608 TPM3P06753 285 aa12.87□□□□□ -0.35
TMX3-201ENST00000299608 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
TMX3-201ENST00000299608 C11orf95C9JLR9 678 aaPredicted RBP12.87□□□□□ -0.35
TMX3-201ENST00000299608 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
TMX3-201ENST00000299608 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
TMX3-201ENST00000299608 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
TMX3-201ENST00000299608 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
TMX3-201ENST00000299608 ARID3AQ99856 593 aa12.86□□□□□ -0.35
TMX3-201ENST00000299608 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
TMX3-201ENST00000299608 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
TMX3-201ENST00000299608 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
TMX3-201ENST00000299608 DUSP27Q5VZP5 1158 aa12.86□□□□□ -0.35
TMX3-201ENST00000299608 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
TMX3-201ENST00000299608 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
TMX3-201ENST00000299608 NEK4P51957 841 aa12.86□□□□□ -0.35
TMX3-201ENST00000299608 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
TMX3-201ENST00000299608 NOS1P29475 1434 aa12.85□□□□□ -0.35
TMX3-201ENST00000299608 KIF14Q15058 1648 aa12.85□□□□□ -0.35
TMX3-201ENST00000299608 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
TMX3-201ENST00000299608 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
TMX3-201ENST00000299608 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
TMX3-201ENST00000299608 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
TMX3-201ENST00000299608 PSMA5P28066 241 aa12.85□□□□□ -0.35
TMX3-201ENST00000299608 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
TMX3-201ENST00000299608 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
TMX3-201ENST00000299608 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
TMX3-201ENST00000299608 PCMTD1Q96MG8 357 aaPredicted RBP12.84□□□□□ -0.35
TMX3-201ENST00000299608 FBLN1P23142 703 aa12.84□□□□□ -0.35
TMX3-201ENST00000299608 AACSQ86V21 672 aa12.84□□□□□ -0.35
TMX3-201ENST00000299608 CUL7Q14999 1698 aa12.84□□□□□ -0.35
TMX3-201ENST00000299608 EXOC5O00471 708 aa12.83□□□□□ -0.36
TMX3-201ENST00000299608 HSPA2P54652 639 aa12.83□□□□□ -0.36
TMX3-201ENST00000299608 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
TMX3-201ENST00000299608 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
TMX3-201ENST00000299608 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
TMX3-201ENST00000299608 TNRQ92752 1358 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 MVPQ14764 893 aaKnown RBP12.82□□□□□ -0.36
TMX3-201ENST00000299608 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.36
TMX3-201ENST00000299608 ASXL2Q76L83 1435 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 TPM2P07951 284 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 CT47B1P0C2W7 299 aaPredicted RBP12.82□□□□□ -0.36
TMX3-201ENST00000299608 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
TMX3-201ENST00000299608 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 ACEP12821 1306 aa12.82□□□□□ -0.36
TMX3-201ENST00000299608 ZPR1O75312 459 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 XBP1P17861 261 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
TMX3-201ENST00000299608 CCDC73Q6ZRK6 1079 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 TPM1P09493 284 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 HIP1O00291 1037 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 ZSCAN29Q8IWY8 852 aaPredicted RBP12.81□□□□□ -0.36
TMX3-201ENST00000299608 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 NUCB2P80303 420 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
TMX3-201ENST00000299608 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
TMX3-201ENST00000299608 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
TMX3-201ENST00000299608 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
TMX3-201ENST00000299608 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
TMX3-201ENST00000299608 NACAP1Q9BZK3 213 aa12.8□□□□□ -0.36
TMX3-201ENST00000299608 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
TMX3-201ENST00000299608 F6X3S4 739 aa12.79□□□□□ -0.36
TMX3-201ENST00000299608 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
TMX3-201ENST00000299608 HOOK1Q9UJC3 728 aaKnown RBP12.79□□□□□ -0.36
TMX3-201ENST00000299608 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
TMX3-201ENST00000299608 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
TMX3-201ENST00000299608 MYD88Q99836 296 aa12.79□□□□□ -0.36
TMX3-201ENST00000299608 ATP10BO94823 1461 aa12.78□□□□□ -0.36
TMX3-201ENST00000299608 SDF4Q9BRK5 362 aa12.78□□□□□ -0.36
TMX3-201ENST00000299608 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
TMX3-201ENST00000299608 METTL24Q5JXM2 366 aa12.78□□□□□ -0.36
TMX3-201ENST00000299608 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
TMX3-201ENST00000299608 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
TMX3-201ENST00000299608 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
TMX3-201ENST00000299608 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
TMX3-201ENST00000299608 GPATCH8Q9UKJ3 1502 aaKnown RBP12.78□□□□□ -0.36
TMX3-201ENST00000299608 GPTP24298 496 aa12.78□□□□□ -0.36
TMX3-201ENST00000299608 STK3Q13188 491 aa12.77□□□□□ -0.36
TMX3-201ENST00000299608 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.36
TMX3-201ENST00000299608 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.36
TMX3-201ENST00000299608 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
TMX3-201ENST00000299608 A0A0U1RQG5 324 aaPredicted RBP12.77□□□□□ -0.37
TMX3-201ENST00000299608 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.37
TMX3-201ENST00000299608 TOM1O60784 492 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 SASS6Q6UVJ0 657 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
TMX3-201ENST00000299608 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
TMX3-201ENST00000299608 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
TMX3-201ENST00000299608 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 LRPPRCP42704 1394 aaKnown RBP12.76□□□□□ -0.37
TMX3-201ENST00000299608 TDO2P48775 406 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 THOC2Q8NI27 1593 aaKnown RBP12.76□□□□□ -0.37
TMX3-201ENST00000299608 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
TMX3-201ENST00000299608 KDM5BQ9UGL1 1544 aa12.76□□□□□ -0.37
TMX3-201ENST00000299608 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms