RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PIP4K2AP48426 406 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-201ENST00000298875 PAF1Q8N7H5 531 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 TNMDQ9H2S6 317 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 STK3Q13188 491 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 ANKRD18AQ8IVF6 992 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 TTC39AQ5SRH9 613 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 SMG6Q86US8 1419 aaKnown RBP6.58□□□□□ -1.36
CPSF2-201ENST00000298875 MAPK8IP2Q13387 824 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-201ENST00000298875 GIMAP7Q8NHV1 300 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 VGFO15240 615 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-201ENST00000298875 CCDC192P0DO97 292 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 ABCA10Q8WWZ4 1543 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 NEK4P51957 841 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 SLC3A2P08195 630 aaKnown RBP6.58□□□□□ -1.36
CPSF2-201ENST00000298875 TBC1D2BQ9UPU7 963 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 PDCP20941 246 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 MAP4K4O95819 1239 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-201ENST00000298875 KIF6Q6ZMV9 814 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 PPFIBP1Q86W92 1011 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 MPNDQ8N594 471 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 TANGO6Q9C0B7 1094 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 PRG4Q92954 1404 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-201ENST00000298875 PDCL3Q9H2J4 239 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 LUZP1Q86V48 1076 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 LRRCC1Q9C099 1032 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 LUC7LQ9NQ29 371 aaKnown RBP6.57□□□□□ -1.36
CPSF2-201ENST00000298875 AKNAQ7Z591 1439 aa6.57□□□□□ -1.36
CPSF2-201ENST00000298875 HIP1O00291 1037 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 EZRP15311 586 aaKnown RBP6.56□□□□□ -1.36
CPSF2-201ENST00000298875 DACH1Q9UI36 760 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 NUTM2GQ5VZR2 741 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 CCDC7Q96M83 1385 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 STIM1Q13586 685 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 GBP3Q9H0R5 595 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 CYP46A1Q9Y6A2 500 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 POLA1P09884 1462 aaPredicted RBP6.56□□□□□ -1.36
CPSF2-201ENST00000298875 SEPT11Q9NVA2 429 aaKnown RBP6.56□□□□□ -1.36
CPSF2-201ENST00000298875 MCM3P25205 808 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 CCDC112Q8NEF3 446 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 KIF21BO75037 1637 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 JMYQ8N9B5 988 aa6.56□□□□□ -1.36
CPSF2-201ENST00000298875 ME1P48163 572 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 ATP2B2Q01814 1243 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 CCDC69A6NI79 296 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 CBFA2T2O43439 604 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 FAM177BA6PVY3 158 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 MCM2P49736 904 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 KIAA1328Q86T90 577 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 LRRFIP2Q9Y608 721 aaKnown RBP6.55□□□□□ -1.36
CPSF2-201ENST00000298875 SNAPC4Q5SXM2 1469 aa6.55□□□□□ -1.36
CPSF2-201ENST00000298875 SH3BGRP55822 239 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-201ENST00000298875 RAPGEF4Q8WZA2 1011 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 POTEB2H3BUK9 544 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 ZHX3Q9H4I2 956 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 BRD4O60885 1362 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-201ENST00000298875 FEZ1Q99689 392 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 GRPEL1Q9HAV7 217 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 ARHGAP5Q13017 1502 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 GNAI3P08754 354 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 AEBP1Q8IUX7 1158 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 CNNM1Q9NRU3 951 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 K7ELQ4 463 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-201ENST00000298875 SF3B2Q13435 895 aaKnown RBP6.54□□□□□ -1.36
CPSF2-201ENST00000298875 MATR3P43243 847 aaKnown RBP eCLIP6.54□□□□□ -1.361e-6■□□□□ 9.9
CPSF2-201ENST00000298875 ERC1Q8IUD2 1116 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 GOLGA6L10A0A0M3HER8 536 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 SLC26A8Q96RN1 970 aa6.54□□□□□ -1.36
CPSF2-201ENST00000298875 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.54□□□□□ -1.36
CPSF2-201ENST00000298875 NOB1Q9ULX3 412 aaKnown RBP6.54□□□□□ -1.36
CPSF2-201ENST00000298875 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
CPSF2-201ENST00000298875 SIL1Q9H173 461 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 WDR62O43379 1518 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 PDZRN3Q9UPQ7 1066 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 KRT85P78386 507 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 IRX3P78415 501 aaPredicted RBP6.53□□□□□ -1.36
CPSF2-201ENST00000298875 RRBP1Q9P2E9 1410 aaKnown RBP6.53□□□□□ -1.36
CPSF2-201ENST00000298875 CLGNO14967 610 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 CABP2Q9NPB3 220 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
CPSF2-201ENST00000298875 GNAI2P04899 355 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 NF2P35240 595 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 TRIM22Q8IYM9 498 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 ZNF428Q96B54 188 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
CPSF2-201ENST00000298875 TOP2BQ02880 1626 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 SURF6O75683 361 aaKnown RBP6.53□□□□□ -1.36
CPSF2-201ENST00000298875 CEP57L1Q8IYX8 460 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 SCAPERQ9BY12 1400 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 NUP133Q8WUM0 1156 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 SLC52A1Q9NWF4 448 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 NLRP2Q9NX02 1062 aa6.53□□□□□ -1.36
CPSF2-201ENST00000298875 MICALCLQ6ZW33 695 aa6.52□□□□□ -1.37
CPSF2-201ENST00000298875 PHF23Q9BUL5 403 aaPredicted RBP6.52□□□□□ -1.37
CPSF2-201ENST00000298875 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms