RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 GABPB2Q8TAK5 448 aaPredicted RBP8.79□□□□□ -1
TSC1-201ENST00000298552 PAK3O75914 559 aaPredicted RBP8.78□□□□□ -1
TSC1-201ENST00000298552 SNX16P57768 344 aa8.78□□□□□ -1
TSC1-201ENST00000298552 FAM43AQ8N2R8 423 aa8.78□□□□□ -1
TSC1-201ENST00000298552 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
TSC1-201ENST00000298552 MSH5O43196 834 aa8.78□□□□□ -1
TSC1-201ENST00000298552 ARID4AP29374 1257 aaPredicted RBP8.78□□□□□ -1
TSC1-201ENST00000298552 AIMP1Q12904 312 aaKnown RBP8.78□□□□□ -1
TSC1-201ENST00000298552 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
TSC1-201ENST00000298552 DNAJC21Q5F1R6 531 aaKnown RBP8.78□□□□□ -1
TSC1-201ENST00000298552 CRACR2AQ9BSW2 395 aa8.78□□□□□ -1
TSC1-201ENST00000298552 CASTP20810 708 aaKnown RBP8.78□□□□□ -1
TSC1-201ENST00000298552 MIPOL1Q8TD10 442 aa8.78□□□□□ -1
TSC1-201ENST00000298552 AAMPQ13685 434 aa8.78□□□□□ -1
TSC1-201ENST00000298552 PDILTQ8N807 584 aa8.78□□□□□ -1
TSC1-201ENST00000298552 GNL3LQ9NVN8 582 aaKnown RBP8.78□□□□□ -1
TSC1-201ENST00000298552 RSPH3Q86UC2 560 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
TSC1-201ENST00000298552 RABGAP1Q9Y3P9 1069 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 NAA15Q9BXJ9 866 aaKnown RBP8.77□□□□□ -1.01
TSC1-201ENST00000298552 CEP83Q9Y592 693 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 ACTN2P35609 894 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 CETN1Q12798 172 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 CALCOCO2Q13137 446 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 STMN4Q9H169 189 aaPredicted RBP8.77□□□□□ -1.01
TSC1-201ENST00000298552 SDF4Q9BRK5 362 aa8.77□□□□□ -1.01
TSC1-201ENST00000298552 RBM25P49756 843 aaKnown RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 ROCK2O75116 1388 aaKnown RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 BAZ1BQ9UIG0 1483 aaKnown RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 ZNF287Q9HBT7 754 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 GSTTP1A0A1W2PQM5 241 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 SP100P23497 879 aaPredicted RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 MCM2P49736 904 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 SATB1Q01826 763 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 CFAP58Q5T655 872 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 MATR3P43243 847 aaKnown RBP eCLIP8.76□□□□□ -1.013e-6■■□□□ 12.8
TSC1-201ENST00000298552 APLFQ8IW19 511 aaPredicted RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 RPUSD2Q8IZ73 545 aaKnown RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 NGEFQ8N5V2 710 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 CAPZA3Q96KX2 299 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 SPATA32Q96LK8 384 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 APBB1O00213 710 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 EVA1CP58658 441 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 ERCC6LQ2NKX8 1250 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 CCDC83Q8IWF9 413 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 FBXW7Q969H0 707 aa8.76□□□□□ -1.01
TSC1-201ENST00000298552 NSRP1Q9H0G5 558 aaKnown RBP8.76□□□□□ -1.01
TSC1-201ENST00000298552 MCM6Q14566 821 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 TTC21AQ8NDW8 1320 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 IFIT2P09913 472 aaKnown RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 NAA16Q6N069 864 aaPredicted RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 SLKQ9H2G2 1235 aaPredicted RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 POTEB2H3BUK9 544 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 C10orf67Q8IYJ2 551 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 SMARCC1Q92922 1105 aaPredicted RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 LIMCH1Q9UPQ0 1083 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 SMC3Q9UQE7 1217 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 SF3B2Q13435 895 aaKnown RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 TTC14Q96N46 770 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 GOLGA3Q08378 1498 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 RNF214Q8ND24 703 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 EHMT1Q9H9B1 1298 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 SMC1BQ8NDV3 1235 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 PPP1R14CQ8TAE6 165 aa8.75□□□□□ -1.01
TSC1-201ENST00000298552 PSPC1Q8WXF1 523 aaKnown RBP8.75□□□□□ -1.01
TSC1-201ENST00000298552 TPD52P55327 224 aaPredicted RBP8.74□□□□□ -1.01
TSC1-201ENST00000298552 NDC80O14777 642 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 CFAP100Q494V2 611 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 CCDC102AQ96A19 550 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 CDKL5O76039 1030 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
TSC1-201ENST00000298552 SH3BP5O60239 455 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 EIF2S2P20042 333 aaKnown RBP8.74□□□□□ -1.01
TSC1-201ENST00000298552 CEP128Q6ZU80 1094 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 PHLDB2Q86SQ0 1253 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 ANKS4BQ8N8V4 417 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 CCDC117Q8IWD4 279 aaPredicted RBP8.74□□□□□ -1.01
TSC1-201ENST00000298552 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
TSC1-201ENST00000298552 CCDC50Q8IVM0 306 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 ZFYVE1Q9HBF4 777 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
TSC1-201ENST00000298552 SSBP05455 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
TSC1-201ENST00000298552 ALDH3A1P30838 453 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 GAS8O95995 478 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 CTNNA2P26232 953 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 IFFO1Q0D2I5 559 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
TSC1-201ENST00000298552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.73□□□□□ -1.01
TSC1-201ENST00000298552 BICD1Q96G01 975 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 HAUS8Q9BT25 410 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 NOL7Q9UMY1 257 aaKnown RBP8.73□□□□□ -1.01
TSC1-201ENST00000298552 PDCD2Q16342 344 aaPredicted RBP8.73□□□□□ -1.01
TSC1-201ENST00000298552 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 UACAQ9BZF9 1416 aa8.73□□□□□ -1.01
TSC1-201ENST00000298552 PDE3BQ13370 1112 aa8.72□□□□□ -1.01
TSC1-201ENST00000298552 ERCC6Q03468 1493 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms