RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RPGRQ92834 1020 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 CCDC61Q9Y6R9 512 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 PTCD1O75127 700 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 PHF8Q9UPP1 1060 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 AMOTL2Q9Y2J4 779 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 AK7Q96M32 723 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 ARID3AQ99856 593 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 LRP2BPQ9P2M1 347 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 KIAA0586Q9BVV6 1533 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 DEKP35659 375 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 ZNF219Q9P2Y4 722 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 SYNJ1O43426 1573 aa8.28□□□□□ -1.08
GAPVD1-202ENST00000297933 CEP126Q9P2H0 1117 aa8.27□□□□□ -1.08
GAPVD1-202ENST00000297933 WAPLQ7Z5K2 1190 aa8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 HSP90AB2PQ58FF8 381 aa8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 CCDC85AQ96PX6 553 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 SPINK5Q9NQ38 1064 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 NOB1Q9ULX3 412 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 BRD4O60885 1362 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 TDO2P48775 406 aa8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 FOXO3O43524 673 aa8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 LAMC3Q9Y6N6 1575 aa8.27□□□□□ -1.09
GAPVD1-202ENST00000297933 IBSPP21815 317 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 SYCP1Q15431 976 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 CAVIN4Q5BKX8 364 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 KRT28Q7Z3Y7 464 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 C1orf115Q9H7X2 142 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 SUPT6HQ7KZ85 1726 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 ZNF76P36508 570 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 CRACR2BQ8N4Y2 399 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 TRIM22Q8IYM9 498 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 TSR2Q969E8 191 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 DAPK1P53355 1430 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 RDXP35241 583 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 LRRCC1Q9C099 1032 aa8.26□□□□□ -1.09
GAPVD1-202ENST00000297933 ARHGEF11O15085 1522 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 NUCB2P80303 420 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 AMOTQ4VCS5 1084 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 METTL24Q5JXM2 366 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 MAGEC2Q9UBF1 373 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 MSH6P52701 1360 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 AACSQ86V21 672 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 ZNF592Q92610 1267 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 HOMER1Q86YM7 354 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 ZHX3Q9H4I2 956 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 DNAJC5BQ9UF47 199 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 IQGAP2Q13576 1575 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 USP5P45974 858 aa8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 NAT10Q9H0A0 1025 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 DENND4BO75064 1496 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 MAGI1Q96QZ7 1491 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-202ENST00000297933 ABCF2Q9UG63 623 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 CCDC141Q6ZP82 1450 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 HSP90AB3PQ58FF7 597 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 CADPS2Q86UW7 1296 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 SDF4Q9BRK5 362 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 UBAC1Q9BSL1 405 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 KIF14Q15058 1648 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 GPS2Q13227 327 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 USHBP1Q8N6Y0 703 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 ZNF287Q9HBT7 754 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 MAP4K4O95819 1239 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 FBXO31Q5XUX0 539 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 C22orf23Q9BZE7 217 aa8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 ZNF396Q96N95 335 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-202ENST00000297933 IDH1O75874 414 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 MYCNP04198 464 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 IFIT1P09914 478 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 CHMP4BP1P59074 171 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 PDCL3Q9H2J4 239 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 TOP2BQ02880 1626 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 CCDC173Q0VFZ6 552 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 AKAP2Q9Y2D5 859 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 SRGAP3O43295 1099 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 FCHSD2O94868 740 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 RFC4P35249 363 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 PDILTQ8N807 584 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 ZNF622Q969S3 477 aaKnown RBP eCLIP8.23□□□□□ -1.092e-7■□□□□ 10
GAPVD1-202ENST00000297933 WDR78Q5VTH9 848 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 DZIP1Q86YF9 867 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 NOL7Q9UMY1 257 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-202ENST00000297933 MYD88Q99836 296 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 CHMP5Q9NZZ3 219 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 CTNNA3Q9UI47 895 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 SLF2Q8IX21 1173 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 C16orf71Q8IYS4 520 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 ARAP1Q96P48 1450 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 TNIP1Q15025 636 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 NSD3Q9BZ95 1437 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 ST5P78524 1137 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms