RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 BRPF1P55201 1214 aaPredicted RBP25.23■■□□□ 1.63
NFIL3-201ENST00000297689 ZRANB1Q9UGI0 708 aa25.23■■□□□ 1.63
NFIL3-201ENST00000297689 SLC4A3P48751 1232 aa25.22■■□□□ 1.63
NFIL3-201ENST00000297689 FTSJ3Q8IY81 847 aaKnown RBP25.22■■□□□ 1.63
NFIL3-201ENST00000297689 NEFMP07197 916 aa25.22■■□□□ 1.63
NFIL3-201ENST00000297689 ALDH1L2Q3SY69 923 aa25.22■■□□□ 1.63
NFIL3-201ENST00000297689 HDAC1Q13547 482 aaPredicted RBP25.21■■□□□ 1.63
NFIL3-201ENST00000297689 PHACTR3Q96KR7 559 aa25.21■■□□□ 1.63
NFIL3-201ENST00000297689 BCL11AQ9H165 835 aa25.21■■□□□ 1.63
NFIL3-201ENST00000297689 NOB1Q9ULX3 412 aaKnown RBP25.21■■□□□ 1.63
NFIL3-201ENST00000297689 DDX19BQ9UMR2 479 aa25.21■■□□□ 1.63
NFIL3-201ENST00000297689 AMOTL2Q9Y2J4 779 aa25.21■■□□□ 1.63
NFIL3-201ENST00000297689 EMILIN1Q9Y6C2 1016 aa25.21■■□□□ 1.63
NFIL3-201ENST00000297689 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.62
NFIL3-201ENST00000297689 DIP2AQ14689 1571 aa25.2■■□□□ 1.62
NFIL3-201ENST00000297689 NFE2L2Q16236 605 aa25.2■■□□□ 1.62
NFIL3-201ENST00000297689 ZNF428Q96B54 188 aa25.19■■□□□ 1.62
NFIL3-201ENST00000297689 KIF16BQ96L93 1317 aa25.18■■□□□ 1.62
NFIL3-201ENST00000297689 NRKQ7Z2Y5 1582 aa25.17■■□□□ 1.62
NFIL3-201ENST00000297689 ZBTB40Q9NUA8 1239 aa25.17■■□□□ 1.62
NFIL3-201ENST00000297689 PTCH1Q13635 1447 aa25.16■■□□□ 1.62
NFIL3-201ENST00000297689 XRN1Q8IZH2 1706 aaKnown RBP25.16■■□□□ 1.62
NFIL3-201ENST00000297689 ZNF853P0CG23 659 aa25.15■■□□□ 1.62
NFIL3-201ENST00000297689 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
NFIL3-201ENST00000297689 ZNF692Q9BU19 519 aaPredicted RBP25.15■■□□□ 1.62
NFIL3-201ENST00000297689 IPO8O15397 1037 aaKnown RBP25.14■■□□□ 1.62
NFIL3-201ENST00000297689 SMC5Q8IY18 1101 aa25.14■■□□□ 1.61
NFIL3-201ENST00000297689 PLEKHG3A1L390 1219 aa25.13■■□□□ 1.61
NFIL3-201ENST00000297689 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
NFIL3-201ENST00000297689 HMOX1P09601 288 aa25.13■■□□□ 1.61
NFIL3-201ENST00000297689 ITPRIPQ8IWB1 547 aa25.13■■□□□ 1.61
NFIL3-201ENST00000297689 DAXXQ9UER7 740 aaPredicted RBP25.13■■□□□ 1.61
NFIL3-201ENST00000297689 ACEP12821 1306 aa25.12■■□□□ 1.61
NFIL3-201ENST00000297689 VAMP4O75379 141 aa25.11■■□□□ 1.61
NFIL3-201ENST00000297689 NFKBIBQ15653 356 aa25.11■■□□□ 1.61
NFIL3-201ENST00000297689 COG3Q96JB2 828 aa25.11■■□□□ 1.61
NFIL3-201ENST00000297689 CALD1Q05682 793 aaKnown RBP25.11■■□□□ 1.61
NFIL3-201ENST00000297689 IFT57Q9NWB7 429 aa25.11■■□□□ 1.61
NFIL3-201ENST00000297689 PIK3R4Q99570 1358 aa25.1■■□□□ 1.61
NFIL3-201ENST00000297689 TTC21BQ7Z4L5 1316 aa25.09■■□□□ 1.61
NFIL3-201ENST00000297689 DLG5Q8TDM6 1919 aa25.09■■□□□ 1.61
NFIL3-201ENST00000297689 ARHGAP45Q92619 1136 aa25.08■■□□□ 1.61
NFIL3-201ENST00000297689 TBC1D32Q96NH3 1257 aa25.08■■□□□ 1.61
NFIL3-201ENST00000297689 GNAI1P63096 354 aa25.08■■□□□ 1.6
NFIL3-201ENST00000297689 RGPD8O14715 1765 aaPredicted RBP25.07■■□□□ 1.6
NFIL3-201ENST00000297689 USP6P35125 1406 aa25.07■■□□□ 1.6
NFIL3-201ENST00000297689 MRPL50Q8N5N7 158 aaKnown RBP25.07■■□□□ 1.6
NFIL3-201ENST00000297689 THUMPD2Q9BTF0 503 aaKnown RBP25.07■■□□□ 1.6
NFIL3-201ENST00000297689 RRS1Q15050 365 aaKnown RBP25.06■■□□□ 1.6
NFIL3-201ENST00000297689 KDM4FA0A1W2PPD8 638 aa25.06■■□□□ 1.6
NFIL3-201ENST00000297689 SSH2Q76I76 1423 aa25.05■■□□□ 1.6
NFIL3-201ENST00000297689 TSPYL6Q8N831 410 aa25.05■■□□□ 1.6
NFIL3-201ENST00000297689 MBIPQ9NS73 344 aa25.05■■□□□ 1.6
NFIL3-201ENST00000297689 KCNA6P17658 529 aa25.04■■□□□ 1.6
NFIL3-201ENST00000297689 ANKLE2Q86XL3 938 aa25.04■■□□□ 1.6
NFIL3-201ENST00000297689 CFAP44Q96MT7 982 aa25.04■■□□□ 1.6
NFIL3-201ENST00000297689 OVOS2A0A0J9YW53 1432 aa25.04■■□□□ 1.6
NFIL3-201ENST00000297689 OVOS2Q6IE36 1432 aa25.04■■□□□ 1.6
NFIL3-201ENST00000297689 NALCNQ8IZF0 1738 aa25.02■■□□□ 1.6
NFIL3-201ENST00000297689 LMOD3Q0VAK6 560 aa25.02■■□□□ 1.6
NFIL3-201ENST00000297689 ZBTB7BO15156 539 aaPredicted RBP25.01■■□□□ 1.59
NFIL3-201ENST00000297689 NUCB1Q02818 461 aa25■■□□□ 1.59
NFIL3-201ENST00000297689 CHD2O14647 1828 aaKnown RBP24.99■■□□□ 1.59
NFIL3-201ENST00000297689 ABCC4O15439 1325 aa24.99■■□□□ 1.59
NFIL3-201ENST00000297689 UPF2Q9HAU5 1272 aaKnown RBP24.98■■□□□ 1.59
NFIL3-201ENST00000297689 USP31Q70CQ4 1352 aa24.98■■□□□ 1.59
NFIL3-201ENST00000297689 FMN2Q9NZ56 1722 aa24.97■■□□□ 1.59
NFIL3-201ENST00000297689 EIF4A2Q14240 407 aaKnown RBP24.97■■□□□ 1.59
NFIL3-201ENST00000297689 BECN1Q14457 450 aa24.97■■□□□ 1.59
NFIL3-201ENST00000297689 C8orf58Q8NAV2 365 aa24.97■■□□□ 1.59
NFIL3-201ENST00000297689 PEAK1Q9H792 1746 aa24.97■■□□□ 1.59
NFIL3-201ENST00000297689 RGPD1P0DJD0 1748 aa24.96■■□□□ 1.59
NFIL3-201ENST00000297689 TWISTNBQ3B726 338 aaPredicted RBP24.96■■□□□ 1.59
NFIL3-201ENST00000297689 FAM83GA6ND36 823 aa24.95■■□□□ 1.58
NFIL3-201ENST00000297689 CHMP4BQ9H444 224 aaKnown RBP24.95■■□□□ 1.58
NFIL3-201ENST00000297689 ANTXR1Q9H6X2 564 aa24.94■■□□□ 1.58
NFIL3-201ENST00000297689 ANKARQ7Z5J8 1434 aa24.94■■□□□ 1.58
NFIL3-201ENST00000297689 AEBP1Q8IUX7 1158 aa24.92■■□□□ 1.58
NFIL3-201ENST00000297689 TTC21AQ8NDW8 1320 aa24.92■■□□□ 1.58
NFIL3-201ENST00000297689 FRAT2O75474 233 aaPredicted RBP24.92■■□□□ 1.58
NFIL3-201ENST00000297689 CHD1LQ86WJ1 897 aa24.91■■□□□ 1.58
NFIL3-201ENST00000297689 TBC1D2Q9BYX2 928 aa24.91■■□□□ 1.58
NFIL3-201ENST00000297689 PIK3C2AO00443 1686 aa24.91■■□□□ 1.58
NFIL3-201ENST00000297689 KIF24Q5T7B8 1368 aa24.9■■□□□ 1.58
NFIL3-201ENST00000297689 ELL2O00472 640 aaPredicted RBP24.9■■□□□ 1.58
NFIL3-201ENST00000297689 NGDNQ8NEJ9 315 aaKnown RBP24.9■■□□□ 1.58
NFIL3-201ENST00000297689 NPHP4O75161 1426 aaPredicted RBP24.9■■□□□ 1.58
NFIL3-201ENST00000297689 DCTN1Q14203 1278 aa24.9■■□□□ 1.58
NFIL3-201ENST00000297689 SIRT2Q8IXJ6 389 aa24.9■■□□□ 1.58
NFIL3-201ENST00000297689 GSE1Q14687 1217 aa24.89■■□□□ 1.58
NFIL3-201ENST00000297689 SULT6B1Q6IMI4 303 aa24.89■■□□□ 1.58
NFIL3-201ENST00000297689 GCC1Q96CN9 775 aa24.89■■□□□ 1.58
NFIL3-201ENST00000297689 CHL1O00533 1208 aa24.89■■□□□ 1.57
NFIL3-201ENST00000297689 C22orf23Q9BZE7 217 aa24.88■■□□□ 1.57
NFIL3-201ENST00000297689 API5Q9BZZ5 524 aaKnown RBP24.88■■□□□ 1.57
NFIL3-201ENST00000297689 HSP90AB2PQ58FF8 381 aa24.86■■□□□ 1.57
NFIL3-201ENST00000297689 LNPKQ9C0E8 428 aa24.86■■□□□ 1.57
NFIL3-201ENST00000297689 MARF1Q9Y4F3 1742 aaKnown RBP24.86■■□□□ 1.57
NFIL3-201ENST00000297689 KIAA0232Q92628 1395 aa24.85■■□□□ 1.57
NFIL3-201ENST00000297689 BMP2KLQ5H9B9 411 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms