RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 RIPK4P57078 832 aa27.84■■■□□ 2.05
SOX17-201ENST00000297316 WDR63Q8IWG1 891 aa27.84■■■□□ 2.05
SOX17-201ENST00000297316 USP54Q70EL1 1684 aa27.83■■■□□ 2.04
SOX17-201ENST00000297316 AEBP1Q8IUX7 1158 aa27.83■■■□□ 2.04
SOX17-201ENST00000297316 PNNQ9H307 717 aaKnown RBP27.82■■■□□ 2.04
SOX17-201ENST00000297316 XIRP1Q702N8 1843 aaKnown RBP27.81■■■□□ 2.04
SOX17-201ENST00000297316 PLEKHG5O94827 1062 aa27.8■■■□□ 2.04
SOX17-201ENST00000297316 ATF3P18847 181 aa27.79■■■□□ 2.04
SOX17-201ENST00000297316 AMPHP49418 695 aa27.79■■■□□ 2.04
SOX17-201ENST00000297316 NCBP3Q53F19 620 aaKnown RBP27.79■■■□□ 2.04
SOX17-201ENST00000297316 SBNO1A3KN83 1393 aa27.79■■■□□ 2.04
SOX17-201ENST00000297316 BCAR3O75815 825 aa27.79■■■□□ 2.04
SOX17-201ENST00000297316 MST1RQ04912 1400 aa27.78■■■□□ 2.04
SOX17-201ENST00000297316 FLT4P35916 1363 aa27.78■■■□□ 2.04
SOX17-201ENST00000297316 SULT6B1Q6IMI4 303 aa27.78■■■□□ 2.04
SOX17-201ENST00000297316 RGPD1P0DJD0 1748 aa27.77■■■□□ 2.04
SOX17-201ENST00000297316 DDX17Q92841 729 aaKnown RBP27.76■■■□□ 2.04
SOX17-201ENST00000297316 ZNF335Q9H4Z2 1342 aaPredicted RBP27.76■■■□□ 2.03
SOX17-201ENST00000297316 DLG5Q8TDM6 1919 aa27.76■■■□□ 2.03
SOX17-201ENST00000297316 RBM19Q9Y4C8 960 aaKnown RBP27.76■■■□□ 2.03
SOX17-201ENST00000297316 NEFMP07197 916 aa27.75■■■□□ 2.03
SOX17-201ENST00000297316 TSR2Q969E8 191 aaKnown RBP27.75■■■□□ 2.03
SOX17-201ENST00000297316 LTN1O94822 1766 aa27.75■■■□□ 2.03
SOX17-201ENST00000297316 NFE2L2Q16236 605 aa27.74■■■□□ 2.03
SOX17-201ENST00000297316 LMOD2Q6P5Q4 547 aa27.74■■■□□ 2.03
SOX17-201ENST00000297316 TRPM3Q9HCF6 1732 aaPredicted RBP27.74■■■□□ 2.03
SOX17-201ENST00000297316 KRT28Q7Z3Y7 464 aa27.73■■■□□ 2.03
SOX17-201ENST00000297316 KIF1AQ12756 1690 aa27.73■■■□□ 2.03
SOX17-201ENST00000297316 HOXC9P31274 260 aa27.72■■■□□ 2.03
SOX17-201ENST00000297316 THUMPD2Q9BTF0 503 aaKnown RBP27.72■■■□□ 2.03
SOX17-201ENST00000297316 NCOA3Q9Y6Q9 1424 aa27.71■■■□□ 2.03
SOX17-201ENST00000297316 DCCP43146 1447 aa27.71■■■□□ 2.03
SOX17-201ENST00000297316 NFAT5O94916 1531 aa27.7■■■□□ 2.03
SOX17-201ENST00000297316 ANP32EQ9BTT0 268 aa27.69■■■□□ 2.02
SOX17-201ENST00000297316 MYH16Q9H6N6 1097 aa27.69■■■□□ 2.02
SOX17-201ENST00000297316 FANCIQ9NVI1 1328 aa27.69■■■□□ 2.02
SOX17-201ENST00000297316 MSH6P52701 1360 aa27.69■■■□□ 2.02
SOX17-201ENST00000297316 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.69■■■□□ 2.02
SOX17-201ENST00000297316 ZBTB7CA1YPR0 619 aa27.68■■■□□ 2.02
SOX17-201ENST00000297316 CADPS2Q86UW7 1296 aa27.68■■■□□ 2.02
SOX17-201ENST00000297316 LTV1Q96GA3 475 aaPredicted RBP27.68■■■□□ 2.02
SOX17-201ENST00000297316 EYA1Q99502 592 aa27.68■■■□□ 2.02
SOX17-201ENST00000297316 FAM83GA6ND36 823 aa27.66■■■□□ 2.02
SOX17-201ENST00000297316 ARHGEF10O15013 1369 aa27.65■■■□□ 2.02
SOX17-201ENST00000297316 RARSP54136 660 aaKnown RBP27.63■■■□□ 2.01
SOX17-201ENST00000297316 EXOSC9Q06265 439 aaKnown RBP27.63■■■□□ 2.01
SOX17-201ENST00000297316 DCTN1Q14203 1278 aa27.63■■■□□ 2.01
SOX17-201ENST00000297316 IL16Q14005 1332 aa27.63■■■□□ 2.01
SOX17-201ENST00000297316 LAS1LQ9Y4W2 734 aaKnown RBP27.63■■■□□ 2.01
SOX17-201ENST00000297316 IGSF1Q8N6C5 1336 aa27.62■■■□□ 2.01
SOX17-201ENST00000297316 GCP02774 474 aa27.62■■■□□ 2.01
SOX17-201ENST00000297316 BCL2L13Q9BXK5 485 aa27.62■■■□□ 2.01
SOX17-201ENST00000297316 KIF24Q5T7B8 1368 aa27.62■■■□□ 2.01
SOX17-201ENST00000297316 ALS2Q96Q42 1657 aa27.61■■■□□ 2.01
SOX17-201ENST00000297316 KCNH5Q8NCM2 988 aa27.61■■■□□ 2.01
SOX17-201ENST00000297316 SLIT3O75094 1523 aa27.6■■■□□ 2.01
SOX17-201ENST00000297316 IP6K1Q92551 441 aa27.59■■■□□ 2.01
SOX17-201ENST00000297316 KDRP35968 1356 aa27.59■■■□□ 2.01
SOX17-201ENST00000297316 RTL1A6NKG5 1358 aa27.58■■■□□ 2.01
SOX17-201ENST00000297316 USHBP1Q8N6Y0 703 aa27.58■■■□□ 2.01
SOX17-201ENST00000297316 USP19O94966 1318 aa27.57■■■□□ 2
SOX17-201ENST00000297316 RGPD2P0DJD1 1756 aa27.57■■■□□ 2
SOX17-201ENST00000297316 MED1Q15648 1581 aaPredicted RBP27.55■■■□□ 2
SOX17-201ENST00000297316 BRINP3Q76B58 766 aa27.55■■■□□ 2
SOX17-201ENST00000297316 ARHGEF25Q86VW2 580 aa27.55■■■□□ 2
SOX17-201ENST00000297316 FRAT1Q92837 279 aaPredicted RBP27.55■■■□□ 2
SOX17-201ENST00000297316 MTHFSDQ2M296 383 aaKnown RBP27.55■■■□□ 2
SOX17-201ENST00000297316 NPHP3Q7Z494 1330 aa27.54■■■□□ 2
SOX17-201ENST00000297316 PANK1Q8TE04 598 aa27.54■■■□□ 2
SOX17-201ENST00000297316 TNNQ9UQP3 1299 aa27.54■■■□□ 2
SOX17-201ENST00000297316 MCM10Q7L590 875 aa27.53■■■□□ 2
SOX17-201ENST00000297316 LMOD3Q0VAK6 560 aa27.53■■■□□ 2
SOX17-201ENST00000297316 PHRF1Q9P1Y6 1649 aaKnown RBP27.53■■■□□ 2
SOX17-201ENST00000297316 PXDNQ92626 1479 aa27.52■■■□□ 2
SOX17-201ENST00000297316 KDM2BQ8NHM5 1336 aa27.52■■■□□ 2
SOX17-201ENST00000297316 CANXP27824 592 aaKnown RBP27.52■■■□□ 2
SOX17-201ENST00000297316 PDE3AQ14432 1141 aa27.52■■■□□ 2
SOX17-201ENST00000297316 SKAP1Q86WV1 359 aa27.52■■■□□ 2
SOX17-201ENST00000297316 CABLES1Q8TDN4 633 aa27.52■■■□□ 2
SOX17-201ENST00000297316 ZC3H6P61129 1189 aaKnown RBP27.51■■□□□ 1.99
SOX17-201ENST00000297316 RGPD5Q99666 1765 aa27.51■■□□□ 1.99
SOX17-201ENST00000297316 NBPF6Q5VWK0 638 aa27.51■■□□□ 1.99
SOX17-201ENST00000297316 LRRC59Q96AG4 307 aaKnown RBP27.51■■□□□ 1.99
SOX17-201ENST00000297316 NBPF4Q96M43 638 aa27.51■■□□□ 1.99
SOX17-201ENST00000297316 MBIPQ9NS73 344 aa27.51■■□□□ 1.99
SOX17-201ENST00000297316 SLAIN2Q9P270 581 aa27.51■■□□□ 1.99
SOX17-201ENST00000297316 ZNF853P0CG23 659 aa27.5■■□□□ 1.99
SOX17-201ENST00000297316 IFT57Q9NWB7 429 aa27.5■■□□□ 1.99
SOX17-201ENST00000297316 AXIN2Q9Y2T1 843 aa27.5■■□□□ 1.99
SOX17-201ENST00000297316 GNAI1P63096 354 aa27.49■■□□□ 1.99
SOX17-201ENST00000297316 CALD1Q05682 793 aaKnown RBP27.49■■□□□ 1.99
SOX17-201ENST00000297316 COG6Q9Y2V7 657 aa27.49■■□□□ 1.99
SOX17-201ENST00000297316 RLBP1P12271 317 aa27.47■■□□□ 1.99
SOX17-201ENST00000297316 SSH1Q8WYL5 1049 aa27.47■■□□□ 1.99
SOX17-201ENST00000297316 TNS3Q68CZ2 1445 aa27.47■■□□□ 1.99
SOX17-201ENST00000297316 CFAP44Q96MT7 982 aa27.47■■□□□ 1.99
SOX17-201ENST00000297316 TSPYL6Q8N831 410 aa27.46■■□□□ 1.99
SOX17-201ENST00000297316 CT47B1P0C2W7 299 aaPredicted RBP27.46■■□□□ 1.99
SOX17-201ENST00000297316 SPATA31A3Q5VYP0 1347 aa27.45■■□□□ 1.98
SOX17-201ENST00000297316 ELL2O00472 640 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms